EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000006133 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 215221 bases
Position: chrFYBX02009786.1:74076-289296
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000009532	ResIII	PF04851.15	9.2e-12	1	1
ENSEBUP00000009558	ResIII	PF04851.15	4.3e-09	1	1
ENSEBUP00000009532	DEAD	PF00270.29	4.8e-26	1	1
ENSEBUP00000009558	DEAD	PF00270.29	4.8e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000010084	-	1400	-	ENSEBUP00000009558	355 (aa)	-	-
ENSEBUT00000010057	-	1772	-	ENSEBUP00000009532	479 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000006133's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000006133's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000006133	-	92	38.816	ENSEBUG00000016524	snrnp200	51	38.816
ENSEBUG00000006133	-	88	36.036	ENSEBUG00000009772	-	73	36.036
ENSEBUG00000006133	-	87	47.368	ENSEBUG00000007355	-	57	39.278

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000006133	-	88	65.190	ENSAPOG00000005304	hfm1	50	61.731	Acanthochromis_polyacanthus
ENSEBUG00000006133	-	91	61.098	ENSAOCG00000022839	hfm1	50	61.098	Amphiprion_ocellaris
ENSEBUG00000006133	-	91	61.098	ENSAPEG00000014316	hfm1	50	61.098	Amphiprion_percula
ENSEBUG00000006133	-	92	60.841	ENSACLG00000009033	hfm1	53	60.841	Astatotilapia_calliptera
ENSEBUG00000006133	-	55	59.024	ENSCAFG00020013595	-	55	57.197	Canis_lupus_dingo
ENSEBUG00000006133	-	78	65.116	ENSCSAVG00000005094	-	55	53.771	Ciona_savignyi
ENSEBUG00000006133	-	91	61.276	ENSGAFG00000018093	hfm1	50	61.276	Gambusia_affinis
ENSEBUG00000006133	-	50	60.894	ENSGAGG00000025197	-	67	62.115	Gopherus_agassizii
ENSEBUG00000006133	-	89	62.264	ENSHCOG00000019632	hfm1	52	62.264	Hippocampus_comes
ENSEBUG00000006133	-	53	60.309	ENSSTOG00000008477	-	53	57.874	Ictidomys_tridecemlineatus
ENSEBUG00000006133	-	89	63.679	ENSLBEG00000006759	hfm1	51	61.468	Labrus_bergylta
ENSEBUG00000006133	-	88	69.281	ENSLAFG00000015903	-	58	66.207	Loxodonta_africana
ENSEBUG00000006133	-	89	64.858	ENSMAMG00000004623	hfm1	68	62.189	Mastacembelus_armatus
ENSEBUG00000006133	-	91	62.100	ENSMZEG00005004679	hfm1	51	62.100	Maylandia_zebra
ENSEBUG00000006133	-	91	62.299	ENSMMOG00000006148	hfm1	68	62.019	Mola_mola
ENSEBUG00000006133	-	92	61.400	ENSNBRG00000002910	hfm1	52	61.400	Neolamprologus_brichardi
ENSEBUG00000006133	-	89	62.441	ENSORLG00000026844	hfm1	65	61.765	Oryzias_latipes
ENSEBUG00000006133	-	91	63.927	ENSPKIG00000003810	hfm1	54	64.677	Paramormyrops_kingsleyae
ENSEBUG00000006133	-	89	61.085	ENSPMGG00000011059	hfm1	53	61.453	Periophthalmus_magnuspinnatus
ENSEBUG00000006133	-	91	61.416	ENSPREG00000007803	hfm1	73	57.080	Poecilia_reticulata
ENSEBUG00000006133	-	92	60.841	ENSPNYG00000001795	hfm1	53	60.841	Pundamilia_nyererei
ENSEBUG00000006133	-	88	65.823	ENSSPAG00000001023	hfm1	50	62.471	Stegastes_partitus
ENSEBUG00000006133	-	90	57.991	ENSTNIG00000006962	hfm1	87	57.991	Tetraodon_nigroviridis
ENSEBUG00000006133	-	55	44.390	ENSUAMG00000008754	-	53	44.030	Ursus_americanus
ENSEBUG00000006133	-	55	58.537	ENSUMAG00000001345	-	55	56.818	Ursus_maritimus
ENSEBUG00000006133	-	86	67.883	ENSVVUG00000020760	HFM1	52	55.731	Vulpes_vulpes