EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000006229 (Gene tree)
Gene ID: -
Gene Symbol: srsf5b
Alias: sfrs5b|wu:fe15e05|zgc:113907|zgc:92278
Full Name: serine/arginine-rich splicing factor 5b
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 51772 bases
Position: chrFYBX02008842.1:1509130-1560901
Accession: ZDB-GENE-040718-354
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000009722	RRM_1	PF00076.22	2.5e-33	1	2
ENSEBUP00000009722	RRM_1	PF00076.22	2.5e-33	2	2
ENSEBUP00000009693	RRM_1	PF00076.22	3.4e-33	1	2
ENSEBUP00000009693	RRM_1	PF00076.22	3.4e-33	2	2
ENSEBUP00000009709	RRM_1	PF00076.22	3.8e-33	1	2
ENSEBUP00000009709	RRM_1	PF00076.22	3.8e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000010252	-	4341	-	ENSEBUP00000009722	262 (aa)	-	-
ENSEBUT00000010238	-	4455	-	ENSEBUP00000009709	300 (aa)	-	-
ENSEBUT00000010222	-	4240	-	ENSEBUP00000009693	290 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000006229's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000006229's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000006229	srsf5b	64	41.860	ENSEBUG00000009582	-	71	41.860
ENSEBUG00000006229	srsf5b	61	51.235	ENSEBUG00000003129	srsf4	69	52.532
ENSEBUG00000006229	srsf5b	90	40.299	ENSEBUG00000001681	srsf4	67	50.549
ENSEBUG00000006229	srsf5b	59	31.818	ENSEBUG00000001322	-	52	30.986

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000006229	srsf5b	68	65.730	ENSG00000100650	SRSF5	98	61.600	Homo_sapiens
ENSEBUG00000006229	srsf5b	69	63.874	ENSAPOG00000008642	srsf5b	65	62.245	Acanthochromis_polyacanthus
ENSEBUG00000006229	srsf5b	68	65.730	ENSAMEG00000014574	SRSF5	67	64.865	Ailuropoda_melanoleuca
ENSEBUG00000006229	srsf5b	92	46.429	ENSACIG00000010742	srsf5b	81	57.037	Amphilophus_citrinellus
ENSEBUG00000006229	srsf5b	69	63.874	ENSAOCG00000005719	srsf5b	65	62.245	Amphiprion_ocellaris
ENSEBUG00000006229	srsf5b	69	63.874	ENSAPEG00000007830	srsf5b	65	62.245	Amphiprion_percula
ENSEBUG00000006229	srsf5b	83	51.724	ENSATEG00000019112	srsf5b	64	63.265	Anabas_testudineus
ENSEBUG00000006229	srsf5b	65	64.740	ENSAPLG00000014681	SRSF5	66	64.804	Anas_platyrhynchos
ENSEBUG00000006229	srsf5b	68	64.835	ENSACAG00000005143	SRSF5	69	64.706	Anolis_carolinensis
ENSEBUG00000006229	srsf5b	55	46.541	ENSANAG00000037529	-	95	59.200	Aotus_nancymaae
ENSEBUG00000006229	srsf5b	68	65.730	ENSANAG00000027977	-	95	62.766	Aotus_nancymaae
ENSEBUG00000006229	srsf5b	91	51.429	ENSACLG00000026424	srsf5b	64	62.755	Astatotilapia_calliptera
ENSEBUG00000006229	srsf5b	69	65.591	ENSAMXG00000011932	srsf5b	84	62.400	Astyanax_mexicanus
ENSEBUG00000006229	srsf5b	68	65.730	ENSBTAG00000011596	SRSF5	67	64.865	Bos_taurus
ENSEBUG00000006229	srsf5b	68	65.730	ENSCJAG00000014884	SRSF5	95	62.766	Callithrix_jacchus
ENSEBUG00000006229	srsf5b	68	65.730	ENSCAFG00000016589	SRSF5	67	64.865	Canis_familiaris
ENSEBUG00000006229	srsf5b	68	65.730	ENSCAFG00020005661	SRSF5	67	64.865	Canis_lupus_dingo
ENSEBUG00000006229	srsf5b	68	65.730	ENSCHIG00000016794	SRSF5	66	64.865	Capra_hircus
ENSEBUG00000006229	srsf5b	68	65.730	ENSTSYG00000007786	SRSF5	95	62.766	Carlito_syrichta
ENSEBUG00000006229	srsf5b	68	65.730	ENSCAPG00000008801	SRSF5	88	58.025	Cavia_aperea
ENSEBUG00000006229	srsf5b	68	65.730	ENSCPOG00000039926	SRSF5	66	64.865	Cavia_porcellus
ENSEBUG00000006229	srsf5b	68	65.730	ENSCCAG00000029002	SRSF5	95	62.766	Cebus_capucinus
ENSEBUG00000006229	srsf5b	68	65.730	ENSCATG00000045051	SRSF5	95	62.766	Cercocebus_atys
ENSEBUG00000006229	srsf5b	68	65.730	ENSCSAG00000013041	SRSF5	67	64.865	Chlorocebus_sabaeus
ENSEBUG00000006229	srsf5b	68	66.292	ENSCPBG00000021653	SRSF5	68	65.405	Chrysemys_picta_bellii
ENSEBUG00000006229	srsf5b	68	65.730	ENSCANG00000030560	SRSF5	95	62.766	Colobus_angolensis_palliatus
ENSEBUG00000006229	srsf5b	68	65.730	ENSCGRG00001015339	Srsf5	68	64.865	Cricetulus_griseus_chok1gshd
ENSEBUG00000006229	srsf5b	68	65.730	ENSCGRG00000009833	Srsf5	89	58.848	Cricetulus_griseus_crigri
ENSEBUG00000006229	srsf5b	76	55.251	ENSCSEG00000003801	srsf5b	66	61.735	Cynoglossus_semilaevis
ENSEBUG00000006229	srsf5b	69	62.827	ENSCVAG00000017240	srsf5b	58	61.735	Cyprinodon_variegatus
ENSEBUG00000006229	srsf5b	68	67.403	ENSDARG00000027734	srsf5b	94	59.542	Danio_rerio
ENSEBUG00000006229	srsf5b	68	65.730	ENSDNOG00000006160	SRSF5	68	64.865	Dasypus_novemcinctus
ENSEBUG00000006229	srsf5b	68	65.730	ENSDORG00000003989	Srsf5	68	64.865	Dipodomys_ordii
ENSEBUG00000006229	srsf5b	68	62.147	ENSETEG00000020396	SRSF5	68	63.736	Echinops_telfairi
ENSEBUG00000006229	srsf5b	68	65.730	ENSEASG00005016615	SRSF5	67	64.865	Equus_asinus_asinus
ENSEBUG00000006229	srsf5b	68	65.730	ENSECAG00000026873	SRSF5	90	60.630	Equus_caballus
ENSEBUG00000006229	srsf5b	76	56.364	ENSELUG00000019852	srsf5b	85	52.381	Esox_lucius
ENSEBUG00000006229	srsf5b	68	65.730	ENSFCAG00000008848	SRSF5	94	62.766	Felis_catus
ENSEBUG00000006229	srsf5b	68	64.407	ENSFALG00000004979	SRSF5	68	65.761	Ficedula_albicollis
ENSEBUG00000006229	srsf5b	68	65.730	ENSFDAG00000011562	SRSF5	68	64.865	Fukomys_damarensis
ENSEBUG00000006229	srsf5b	69	63.351	ENSFHEG00000009476	srsf5b	61	62.245	Fundulus_heteroclitus
ENSEBUG00000006229	srsf5b	76	48.594	ENSGMOG00000000595	srsf5b	99	53.947	Gadus_morhua
ENSEBUG00000006229	srsf5b	68	64.407	ENSGALG00000009421	SRSF5	90	61.111	Gallus_gallus
ENSEBUG00000006229	srsf5b	89	51.825	ENSGAFG00000002865	srsf5b	62	62.755	Gambusia_affinis
ENSEBUG00000006229	srsf5b	74	45.059	ENSGACG00000007834	srsf5b	86	55.147	Gasterosteus_aculeatus
ENSEBUG00000006229	srsf5b	68	66.292	ENSGAGG00000004447	SRSF5	68	65.405	Gopherus_agassizii
ENSEBUG00000006229	srsf5b	68	65.730	ENSGGOG00000016462	SRSF5	95	62.766	Gorilla_gorilla
ENSEBUG00000006229	srsf5b	95	46.429	ENSHBUG00000012462	srsf5b	93	56.618	Haplochromis_burtoni
ENSEBUG00000006229	srsf5b	68	65.730	ENSHGLG00000010147	SRSF5	67	64.865	Heterocephalus_glaber_female
ENSEBUG00000006229	srsf5b	68	65.730	ENSHGLG00100015328	SRSF5	67	64.865	Heterocephalus_glaber_male
ENSEBUG00000006229	srsf5b	65	50.000	ENSHGLG00100000095	-	62	64.516	Heterocephalus_glaber_male
ENSEBUG00000006229	srsf5b	68	61.702	ENSHCOG00000005592	srsf5b	64	62.051	Hippocampus_comes
ENSEBUG00000006229	srsf5b	68	65.730	ENSSTOG00000020672	SRSF5	67	64.865	Ictidomys_tridecemlineatus
ENSEBUG00000006229	srsf5b	93	57.551	ENSJJAG00000001688	Srsf5	67	64.865	Jaculus_jaculus
ENSEBUG00000006229	srsf5b	69	63.978	ENSKMAG00000020486	srsf5b	84	59.843	Kryptolebias_marmoratus
ENSEBUG00000006229	srsf5b	69	61.658	ENSLBEG00000013647	srsf5b	85	56.641	Labrus_bergylta
ENSEBUG00000006229	srsf5b	68	65.027	ENSLACG00000005874	SRSF5	68	65.241	Latimeria_chalumnae
ENSEBUG00000006229	srsf5b	68	64.516	ENSLOCG00000012438	srsf5b	70	64.894	Lepisosteus_oculatus
ENSEBUG00000006229	srsf5b	68	65.169	ENSLAFG00000005260	SRSF5	67	64.324	Loxodonta_africana
ENSEBUG00000006229	srsf5b	68	65.730	ENSMFAG00000002393	SRSF5	95	62.766	Macaca_fascicularis
ENSEBUG00000006229	srsf5b	68	65.730	ENSMNEG00000030872	SRSF5	95	62.766	Macaca_nemestrina
ENSEBUG00000006229	srsf5b	68	65.730	ENSMLEG00000030017	SRSF5	95	62.766	Mandrillus_leucophaeus
ENSEBUG00000006229	srsf5b	69	63.298	ENSMAMG00000002673	srsf5b	64	62.755	Mastacembelus_armatus
ENSEBUG00000006229	srsf5b	91	51.429	ENSMZEG00005003550	srsf5b	64	62.755	Maylandia_zebra
ENSEBUG00000006229	srsf5b	53	59.420	ENSMGAG00000011835	SRSF5	63	61.379	Meleagris_gallopavo
ENSEBUG00000006229	srsf5b	68	65.730	ENSMAUG00000009544	Srsf5	89	58.848	Mesocricetus_auratus
ENSEBUG00000006229	srsf5b	68	65.730	ENSMICG00000037432	-	95	62.766	Microcebus_murinus
ENSEBUG00000006229	srsf5b	68	65.730	ENSMOCG00000013134	Srsf5	89	59.259	Microtus_ochrogaster
ENSEBUG00000006229	srsf5b	68	63.636	ENSMMOG00000000137	srsf5b	93	45.255	Mola_mola
ENSEBUG00000006229	srsf5b	68	66.292	ENSMODG00000011362	SRSF5	68	65.405	Monodelphis_domestica
ENSEBUG00000006229	srsf5b	69	62.963	ENSMALG00000021875	srsf5b	84	57.353	Monopterus_albus
ENSEBUG00000006229	srsf5b	68	65.730	ENSMUSG00000021134	Srsf5	96	77.273	Mus_musculus
ENSEBUG00000006229	srsf5b	68	65.730	MGP_PahariEiJ_G0029659	Srsf5	89	58.848	Mus_pahari
ENSEBUG00000006229	srsf5b	68	65.730	ENSMPUG00000007458	SRSF5	67	64.865	Mustela_putorius_furo
ENSEBUG00000006229	srsf5b	68	65.730	ENSMLUG00000011939	SRSF5	65	64.865	Myotis_lucifugus
ENSEBUG00000006229	srsf5b	68	65.730	ENSNGAG00000010073	-	67	64.865	Nannospalax_galili
ENSEBUG00000006229	srsf5b	95	46.732	ENSNBRG00000001285	srsf5b	65	62.755	Neolamprologus_brichardi
ENSEBUG00000006229	srsf5b	68	65.730	ENSNLEG00000001615	SRSF5	95	62.766	Nomascus_leucogenys
ENSEBUG00000006229	srsf5b	68	65.730	ENSOPRG00000008286	SRSF5	65	64.865	Ochotona_princeps
ENSEBUG00000006229	srsf5b	68	65.730	ENSODEG00000013469	-	68	64.865	Octodon_degus
ENSEBUG00000006229	srsf5b	68	65.169	ENSODEG00000000700	-	69	64.324	Octodon_degus
ENSEBUG00000006229	srsf5b	91	51.429	ENSONIG00000005759	srsf5b	64	62.755	Oreochromis_niloticus
ENSEBUG00000006229	srsf5b	68	61.798	ENSOANG00000013336	SRSF5	63	64.912	Ornithorhynchus_anatinus
ENSEBUG00000006229	srsf5b	68	65.730	ENSOCUG00000009274	SRSF5	66	64.865	Oryctolagus_cuniculus
ENSEBUG00000006229	srsf5b	69	64.362	ENSORLG00000029854	srsf5b	68	57.466	Oryzias_latipes
ENSEBUG00000006229	srsf5b	89	51.812	ENSORLG00015001720	srsf5b	65	62.245	Oryzias_latipes_hsok
ENSEBUG00000006229	srsf5b	68	65.730	ENSOGAG00000015122	SRSF5	67	64.865	Otolemur_garnettii
ENSEBUG00000006229	srsf5b	68	65.730	ENSPPAG00000029921	SRSF5	95	62.766	Pan_paniscus
ENSEBUG00000006229	srsf5b	68	65.730	ENSPPRG00000012903	SRSF5	94	62.766	Panthera_pardus
ENSEBUG00000006229	srsf5b	68	65.730	ENSPTIG00000018589	SRSF5	94	62.766	Panthera_tigris_altaica
ENSEBUG00000006229	srsf5b	68	65.730	ENSPTRG00000006488	SRSF5	95	62.766	Pan_troglodytes
ENSEBUG00000006229	srsf5b	68	65.730	ENSPANG00000021091	SRSF5	95	62.766	Papio_anubis
ENSEBUG00000006229	srsf5b	68	66.292	ENSPSIG00000012522	SRSF5	69	65.405	Pelodiscus_sinensis
ENSEBUG00000006229	srsf5b	55	47.170	ENSPMGG00000021646	srsf5b	91	60.465	Periophthalmus_magnuspinnatus
ENSEBUG00000006229	srsf5b	68	65.730	ENSPEMG00000020173	Srsf5	68	64.865	Peromyscus_maniculatus_bairdii
ENSEBUG00000006229	srsf5b	69	68.182	ENSPMAG00000007790	srsf5b	68	70.051	Petromyzon_marinus
ENSEBUG00000006229	srsf5b	68	66.292	ENSPCIG00000011877	SRSF5	68	65.405	Phascolarctos_cinereus
ENSEBUG00000006229	srsf5b	89	53.285	ENSPFOG00000017700	srsf5b	62	62.245	Poecilia_formosa
ENSEBUG00000006229	srsf5b	89	52.727	ENSPLAG00000006480	srsf5b	63	62.564	Poecilia_latipinna
ENSEBUG00000006229	srsf5b	89	53.285	ENSPMEG00000012751	srsf5b	84	56.618	Poecilia_mexicana
ENSEBUG00000006229	srsf5b	89	51.825	ENSPREG00000010381	srsf5b	62	64.062	Poecilia_reticulata
ENSEBUG00000006229	srsf5b	68	65.730	ENSPPYG00000005945	SRSF5	67	64.865	Pongo_abelii
ENSEBUG00000006229	srsf5b	55	63.699	ENSPCAG00000004405	SRSF5	100	63.758	Procavia_capensis
ENSEBUG00000006229	srsf5b	68	65.730	ENSPCOG00000014442	SRSF5	90	60.630	Propithecus_coquereli
ENSEBUG00000006229	srsf5b	91	52.747	ENSPNYG00000002669	srsf5b	94	56.618	Pundamilia_nyererei
ENSEBUG00000006229	srsf5b	69	66.129	ENSPNAG00000011262	srsf5b	84	63.200	Pygocentrus_nattereri
ENSEBUG00000006229	srsf5b	68	65.730	ENSRNOG00000005513	Srsf5	68	64.865	Rattus_norvegicus
ENSEBUG00000006229	srsf5b	68	65.730	ENSRBIG00000013003	SRSF5	95	62.766	Rhinopithecus_bieti
ENSEBUG00000006229	srsf5b	68	65.730	ENSRROG00000043407	SRSF5	95	62.766	Rhinopithecus_roxellana
ENSEBUG00000006229	srsf5b	68	65.730	ENSSBOG00000030784	SRSF5	95	62.766	Saimiri_boliviensis_boliviensis
ENSEBUG00000006229	srsf5b	68	66.292	ENSSHAG00000002871	SRSF5	68	65.405	Sarcophilus_harrisii
ENSEBUG00000006229	srsf5b	76	56.164	ENSSMAG00000019728	srsf5b	62	58.937	Scophthalmus_maximus
ENSEBUG00000006229	srsf5b	69	63.351	ENSSDUG00000005766	srsf5b	66	62.755	Seriola_dumerili
ENSEBUG00000006229	srsf5b	69	63.351	ENSSLDG00000023255	srsf5b	84	57.353	Seriola_lalandi_dorsalis
ENSEBUG00000006229	srsf5b	50	75.000	ENSSARG00000001059	SRSF5	67	56.216	Sorex_araneus
ENSEBUG00000006229	srsf5b	68	63.102	ENSSPUG00000002464	SRSF5	90	57.895	Sphenodon_punctatus
ENSEBUG00000006229	srsf5b	69	64.398	ENSSPAG00000015325	srsf5b	65	62.755	Stegastes_partitus
ENSEBUG00000006229	srsf5b	93	57.959	ENSSSCG00000032583	SRSF5	67	64.865	Sus_scrofa
ENSEBUG00000006229	srsf5b	68	64.407	ENSTGUG00000011425	SRSF5	68	65.761	Taeniopygia_guttata
ENSEBUG00000006229	srsf5b	69	63.492	ENSTRUG00000017811	srsf5b	60	63.021	Takifugu_rubripes
ENSEBUG00000006229	srsf5b	69	63.978	ENSTNIG00000016411	srsf5b	67	65.054	Tetraodon_nigroviridis
ENSEBUG00000006229	srsf5b	68	64.045	ENSTBEG00000001972	SRSF5	96	46.254	Tupaia_belangeri
ENSEBUG00000006229	srsf5b	67	65.537	ENSTTRG00000003318	SRSF5	66	64.674	Tursiops_truncatus
ENSEBUG00000006229	srsf5b	68	65.730	ENSUAMG00000014184	SRSF5	67	64.865	Ursus_americanus
ENSEBUG00000006229	srsf5b	56	64.626	ENSUMAG00000009827	SRSF5	67	64.865	Ursus_maritimus
ENSEBUG00000006229	srsf5b	68	65.730	ENSVPAG00000006448	SRSF5	67	64.865	Vicugna_pacos
ENSEBUG00000006229	srsf5b	68	65.730	ENSVVUG00000003790	SRSF5	67	64.865	Vulpes_vulpes
ENSEBUG00000006229	srsf5b	69	66.120	ENSXETG00000002211	srsf5	68	65.957	Xenopus_tropicalis
ENSEBUG00000006229	srsf5b	89	52.632	ENSXCOG00000001570	srsf5b	65	62.564	Xiphophorus_couchianus
ENSEBUG00000006229	srsf5b	95	46.254	ENSXMAG00000026416	srsf5b	84	57.037	Xiphophorus_maculatus