EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000006305 (Gene tree)
Gene ID: -
Gene Symbol: alyref (1 of many)
Alias: -
Full Name: Aly/REF export factor
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 61823 bases
Position: chrFYBX02010146.1:3773445-3835267
Accession: ZDB-GENE-070928-29
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000009811	RRM_1	PF00076.22	1.3e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000010342	-	2993	-	ENSEBUP00000009811	213 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000006305's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000006305's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000006305	alyref	99	38.258	ENSEBUG00000008253	alyref	66	39.894

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000006305	alyref	100	42.688	ENSAPOG00000000183	-	100	43.307	Acanthochromis_polyacanthus
ENSEBUG00000006305	alyref	99	38.078	ENSACIG00000006351	alyref	70	43.284	Amphilophus_citrinellus
ENSEBUG00000006305	alyref	100	39.706	ENSACIG00000020351	-	100	40.152	Amphilophus_citrinellus
ENSEBUG00000006305	alyref	100	40.071	ENSAOCG00000014012	alyref	72	47.525	Amphiprion_ocellaris
ENSEBUG00000006305	alyref	100	42.460	ENSAOCG00000019305	-	100	44.048	Amphiprion_ocellaris
ENSEBUG00000006305	alyref	100	42.857	ENSAPEG00000013527	-	100	43.651	Amphiprion_percula
ENSEBUG00000006305	alyref	100	40.071	ENSAPEG00000014603	alyref	72	47.525	Amphiprion_percula
ENSEBUG00000006305	alyref	100	39.373	ENSATEG00000004307	alyref	72	42.308	Anabas_testudineus
ENSEBUG00000006305	alyref	100	42.636	ENSATEG00000000382	-	100	43.411	Anabas_testudineus
ENSEBUG00000006305	alyref	52	40.000	ENSAPLG00000014745	-	100	47.826	Anas_platyrhynchos
ENSEBUG00000006305	alyref	100	39.223	ENSACLG00000008432	alyref	72	46.305	Astatotilapia_calliptera
ENSEBUG00000006305	alyref	100	42.697	ENSACLG00000010184	-	100	42.912	Astatotilapia_calliptera
ENSEBUG00000006305	alyref	100	40.845	ENSAMXG00000007359	alyref	70	47.783	Astyanax_mexicanus
ENSEBUG00000006305	alyref	77	44.271	ENSCING00000013568	-	72	40.838	Ciona_intestinalis
ENSEBUG00000006305	alyref	99	38.783	ENSCSAVG00000003324	-	99	35.606	Ciona_savignyi
ENSEBUG00000006305	alyref	100	40.845	ENSCSEG00000017800	alyref	100	42.446	Cynoglossus_semilaevis
ENSEBUG00000006305	alyref	100	41.877	ENSCVAG00000014869	alyref	72	45.226	Cyprinodon_variegatus
ENSEBUG00000006305	alyref	100	40.927	ENSCVAG00000007789	-	100	41.833	Cyprinodon_variegatus
ENSEBUG00000006305	alyref	100	40.702	ENSDARG00000077732	alyref	70	48.768	Danio_rerio
ENSEBUG00000006305	alyref	97	36.264	FBgn0010774	Ref1	70	35.678	Drosophila_melanogaster
ENSEBUG00000006305	alyref	100	42.146	ENSELUG00000008849	-	100	42.205	Esox_lucius
ENSEBUG00000006305	alyref	100	39.209	ENSELUG00000017178	alyref	70	47.716	Esox_lucius
ENSEBUG00000006305	alyref	59	45.513	ENSFALG00000011923	-	96	50.968	Ficedula_albicollis
ENSEBUG00000006305	alyref	100	42.578	ENSFHEG00000004698	-	100	42.063	Fundulus_heteroclitus
ENSEBUG00000006305	alyref	100	39.502	ENSFHEG00000019426	alyref	71	47.938	Fundulus_heteroclitus
ENSEBUG00000006305	alyref	78	45.455	ENSGMOG00000013122	-	100	43.939	Gadus_morhua
ENSEBUG00000006305	alyref	100	41.241	ENSGMOG00000009882	alyref	100	38.828	Gadus_morhua
ENSEBUG00000006305	alyref	100	42.629	ENSGAFG00000007573	-	100	41.833	Gambusia_affinis
ENSEBUG00000006305	alyref	100	39.785	ENSGAFG00000006014	alyref	70	47.668	Gambusia_affinis
ENSEBUG00000006305	alyref	100	42.066	ENSHBUG00000001454	-	100	41.132	Haplochromis_burtoni
ENSEBUG00000006305	alyref	100	39.223	ENSHBUG00000020196	alyref	72	46.305	Haplochromis_burtoni
ENSEBUG00000006305	alyref	98	44.758	ENSHCOG00000012825	-	94	43.952	Hippocampus_comes
ENSEBUG00000006305	alyref	100	40.000	ENSIPUG00000009469	alyref	100	40.357	Ictalurus_punctatus
ENSEBUG00000006305	alyref	86	43.137	ENSSTOG00000016570	-	92	49.451	Ictidomys_tridecemlineatus
ENSEBUG00000006305	alyref	100	44.841	ENSKMAG00000006462	-	100	45.161	Kryptolebias_marmoratus
ENSEBUG00000006305	alyref	85	42.925	ENSKMAG00000008912	alyref	71	47.500	Kryptolebias_marmoratus
ENSEBUG00000006305	alyref	100	40.392	ENSLBEG00000023118	alyref	90	38.931	Labrus_bergylta
ENSEBUG00000006305	alyref	99	39.922	ENSLBEG00000012930	-	99	38.760	Labrus_bergylta
ENSEBUG00000006305	alyref	100	40.146	ENSLBEG00000005387	-	100	39.273	Labrus_bergylta
ENSEBUG00000006305	alyref	85	42.254	ENSLOCG00000013879	alyref	82	43.627	Lepisosteus_oculatus
ENSEBUG00000006305	alyref	100	38.811	ENSMAMG00000003034	alyref	100	37.809	Mastacembelus_armatus
ENSEBUG00000006305	alyref	100	42.529	ENSMAMG00000005464	-	100	42.636	Mastacembelus_armatus
ENSEBUG00000006305	alyref	100	39.223	ENSMZEG00005008639	alyref	72	46.305	Maylandia_zebra
ENSEBUG00000006305	alyref	100	40.000	ENSMZEG00005012096	-	100	43.295	Maylandia_zebra
ENSEBUG00000006305	alyref	99	46.222	ENSMMOG00000007032	-	98	42.609	Mola_mola
ENSEBUG00000006305	alyref	99	40.146	ENSMMOG00000012458	alyref	68	46.392	Mola_mola
ENSEBUG00000006305	alyref	100	42.105	ENSMALG00000006054	-	100	38.346	Monopterus_albus
ENSEBUG00000006305	alyref	100	39.130	ENSMLUG00000006521	-	69	45.596	Myotis_lucifugus
ENSEBUG00000006305	alyref	100	39.928	ENSMLUG00000004098	-	70	45.078	Myotis_lucifugus
ENSEBUG00000006305	alyref	98	38.489	ENSMLUG00000022178	-	68	41.538	Myotis_lucifugus
ENSEBUG00000006305	alyref	100	39.209	ENSMLUG00000014372	-	68	46.114	Myotis_lucifugus
ENSEBUG00000006305	alyref	98	38.246	ENSMLUG00000022467	-	68	37.561	Myotis_lucifugus
ENSEBUG00000006305	alyref	81	41.791	ENSMLUG00000028605	-	66	40.722	Myotis_lucifugus
ENSEBUG00000006305	alyref	98	39.636	ENSMLUG00000030671	-	67	40.816	Myotis_lucifugus
ENSEBUG00000006305	alyref	100	43.882	ENSNGAG00000022014	-	100	47.826	Nannospalax_galili
ENSEBUG00000006305	alyref	100	43.130	ENSNBRG00000017460	-	100	42.857	Neolamprologus_brichardi
ENSEBUG00000006305	alyref	100	38.947	ENSNBRG00000001747	alyref	71	46.305	Neolamprologus_brichardi
ENSEBUG00000006305	alyref	100	39.236	ENSONIG00000019434	alyref	72	47.087	Oreochromis_niloticus
ENSEBUG00000006305	alyref	100	41.509	ENSONIG00000003296	-	100	41.221	Oreochromis_niloticus
ENSEBUG00000006305	alyref	77	47.027	ENSORLG00000001620	-	52	43.243	Oryzias_latipes
ENSEBUG00000006305	alyref	100	39.068	ENSORLG00020011942	alyref	71	45.455	Oryzias_latipes_hni
ENSEBUG00000006305	alyref	100	42.023	ENSORLG00020015673	-	100	39.370	Oryzias_latipes_hni
ENSEBUG00000006305	alyref	100	41.699	ENSORLG00015015143	-	100	40.234	Oryzias_latipes_hsok
ENSEBUG00000006305	alyref	100	39.350	ENSORLG00015022664	alyref	71	45.455	Oryzias_latipes_hsok
ENSEBUG00000006305	alyref	100	39.209	ENSOMEG00000019176	alyref	71	46.667	Oryzias_melastigma
ENSEBUG00000006305	alyref	99	43.725	ENSOMEG00000007158	-	97	39.676	Oryzias_melastigma
ENSEBUG00000006305	alyref	78	42.188	ENSPPAG00000036403	-	68	46.561	Pan_paniscus
ENSEBUG00000006305	alyref	99	40.909	ENSPKIG00000006233	-	81	41.887	Paramormyrops_kingsleyae
ENSEBUG00000006305	alyref	100	42.963	ENSPKIG00000007070	alyref	69	47.895	Paramormyrops_kingsleyae
ENSEBUG00000006305	alyref	99	39.636	ENSPMGG00000016600	alyref	65	45.960	Periophthalmus_magnuspinnatus
ENSEBUG00000006305	alyref	76	43.017	ENSPMGG00000012994	-	97	40.000	Periophthalmus_magnuspinnatus
ENSEBUG00000006305	alyref	100	46.957	ENSPEMG00000016628	-	100	48.246	Peromyscus_maniculatus_bairdii
ENSEBUG00000006305	alyref	100	41.569	ENSPFOG00000017094	-	100	44.223	Poecilia_formosa
ENSEBUG00000006305	alyref	100	39.502	ENSPFOG00000022825	alyref	69	46.907	Poecilia_formosa
ENSEBUG00000006305	alyref	100	39.643	ENSPLAG00000006948	alyref	70	46.907	Poecilia_latipinna
ENSEBUG00000006305	alyref	100	41.569	ENSPLAG00000014380	-	100	44.223	Poecilia_latipinna
ENSEBUG00000006305	alyref	100	39.502	ENSPMEG00000003547	alyref	70	46.907	Poecilia_mexicana
ENSEBUG00000006305	alyref	100	41.569	ENSPMEG00000023039	-	100	44.223	Poecilia_mexicana
ENSEBUG00000006305	alyref	100	39.643	ENSPREG00000015795	alyref	70	46.907	Poecilia_reticulata
ENSEBUG00000006305	alyref	100	42.636	ENSPREG00000003649	-	100	41.797	Poecilia_reticulata
ENSEBUG00000006305	alyref	100	39.223	ENSPNYG00000017498	alyref	72	46.305	Pundamilia_nyererei
ENSEBUG00000006305	alyref	99	40.234	ENSPNYG00000002879	-	98	40.392	Pundamilia_nyererei
ENSEBUG00000006305	alyref	100	39.007	ENSPNAG00000002531	alyref	71	46.535	Pygocentrus_nattereri
ENSEBUG00000006305	alyref	91	42.152	ENSSBOG00000030924	-	84	46.875	Saimiri_boliviensis_boliviensis
ENSEBUG00000006305	alyref	99	40.506	ENSSHAG00000000609	-	99	39.914	Sarcophilus_harrisii
ENSEBUG00000006305	alyref	99	40.076	ENSSHAG00000012866	-	70	36.898	Sarcophilus_harrisii
ENSEBUG00000006305	alyref	79	46.114	ENSSFOG00015003678	alyref	83	44.792	Scleropages_formosus
ENSEBUG00000006305	alyref	85	43.137	ENSSFOG00015003923	alyref	71	46.875	Scleropages_formosus
ENSEBUG00000006305	alyref	100	38.163	ENSSMAG00000009283	alyref	71	46.766	Scophthalmus_maximus
ENSEBUG00000006305	alyref	100	43.866	ENSSMAG00000011169	-	100	40.293	Scophthalmus_maximus
ENSEBUG00000006305	alyref	100	39.716	ENSSDUG00000016158	alyref	72	47.030	Seriola_dumerili
ENSEBUG00000006305	alyref	100	38.163	ENSSLDG00000017803	alyref	72	44.828	Seriola_lalandi_dorsalis
ENSEBUG00000006305	alyref	99	42.913	ENSSPAG00000017028	-	96	41.961	Stegastes_partitus
ENSEBUG00000006305	alyref	100	42.379	ENSTRUG00000003051	-	100	41.667	Takifugu_rubripes
ENSEBUG00000006305	alyref	100	46.614	ENSTNIG00000011595	alyref	100	46.559	Tetraodon_nigroviridis
ENSEBUG00000006305	alyref	100	45.200	ENSTNIG00000014136	-	100	42.041	Tetraodon_nigroviridis
ENSEBUG00000006305	alyref	80	43.878	ENSVVUG00000000272	-	82	47.668	Vulpes_vulpes
ENSEBUG00000006305	alyref	99	38.768	ENSXCOG00000018047	alyref	69	45.596	Xiphophorus_couchianus
ENSEBUG00000006305	alyref	99	38.768	ENSXMAG00000012218	alyref	69	45.596	Xiphophorus_maculatus
ENSEBUG00000006305	alyref	100	41.569	ENSXMAG00000018086	-	100	43.825	Xiphophorus_maculatus