EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000006412 (Gene tree)
Gene ID: -
Gene Symbol: TREX1
Alias: AGS1|DRN3
Full Name: three prime repair exonuclease 1
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 21491 bases
Position: chrFYBX02009634.1:1142209-1163699
Accession: 12269
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000009995	RNase_T	PF00929.24	4.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000010531	TREX1-201	765	-	ENSEBUP00000009995	255 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000006412's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000006412's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000006412	TREX1	92	37.500	ENSAMEG00000008933	TREX2	84	37.500	Ailuropoda_melanoleuca
ENSEBUG00000006412	TREX1	82	40.476	ENSACAG00000012912	TREX2	88	40.476	Anolis_carolinensis
ENSEBUG00000006412	TREX1	86	38.158	ENSACAG00000008936	TREX1	93	38.158	Anolis_carolinensis
ENSEBUG00000006412	TREX1	89	37.662	ENSCAFG00000019185	TREX2	81	37.662	Canis_familiaris
ENSEBUG00000006412	TREX1	91	37.131	ENSCAFG00020023190	TREX2	74	37.131	Canis_lupus_dingo
ENSEBUG00000006412	TREX1	84	39.091	ENSCAPG00000004768	TREX2	80	39.091	Cavia_aperea
ENSEBUG00000006412	TREX1	84	39.091	ENSCPOG00000025702	TREX2	91	39.091	Cavia_porcellus
ENSEBUG00000006412	TREX1	84	38.532	ENSCLAG00000002698	TREX2	90	38.532	Chinchilla_lanigera
ENSEBUG00000006412	TREX1	83	42.654	ENSCPBG00000008273	TREX2	76	42.654	Chrysemys_picta_bellii
ENSEBUG00000006412	TREX1	84	39.091	ENSCGRG00001012110	Trex2	91	39.091	Cricetulus_griseus_chok1gshd
ENSEBUG00000006412	TREX1	84	34.091	ENSDORG00000016464	Trex1	70	34.091	Dipodomys_ordii
ENSEBUG00000006412	TREX1	95	33.840	ENSEASG00005019558	TREX2	94	33.840	Equus_asinus_asinus
ENSEBUG00000006412	TREX1	95	34.221	ENSECAG00000016012	TREX2	94	34.221	Equus_caballus
ENSEBUG00000006412	TREX1	83	38.462	ENSFCAG00000018938	TREX2	89	38.462	Felis_catus
ENSEBUG00000006412	TREX1	84	40.090	ENSFDAG00000014463	TREX2	91	40.090	Fukomys_damarensis
ENSEBUG00000006412	TREX1	84	38.636	ENSHGLG00000008010	TREX2	91	38.636	Heterocephalus_glaber_female
ENSEBUG00000006412	TREX1	84	38.636	ENSHGLG00100011918	TREX2	91	38.636	Heterocephalus_glaber_male
ENSEBUG00000006412	TREX1	84	37.727	ENSSTOG00000027213	TREX2	91	37.727	Ictidomys_tridecemlineatus
ENSEBUG00000006412	TREX1	84	39.545	ENSJJAG00000012484	Trex2	91	39.545	Jaculus_jaculus
ENSEBUG00000006412	TREX1	83	41.981	ENSLACG00000000797	-	83	41.981	Latimeria_chalumnae
ENSEBUG00000006412	TREX1	84	38.636	ENSMOCG00000001305	Trex2	91	38.636	Microtus_ochrogaster
ENSEBUG00000006412	TREX1	76	38.500	ENSMODG00000025322	-	80	38.500	Monodelphis_domestica
ENSEBUG00000006412	TREX1	76	39.000	ENSMODG00000022848	-	80	39.000	Monodelphis_domestica
ENSEBUG00000006412	TREX1	84	38.636	MGP_CAROLIEiJ_G0033149	Trex2	91	38.636	Mus_caroli
ENSEBUG00000006412	TREX1	84	38.182	ENSMUSG00000031372	Trex2	91	38.182	Mus_musculus
ENSEBUG00000006412	TREX1	84	38.636	MGP_PahariEiJ_G0031692	Trex2	91	38.636	Mus_pahari
ENSEBUG00000006412	TREX1	84	38.182	MGP_SPRETEiJ_G0034304	Trex2	91	38.182	Mus_spretus
ENSEBUG00000006412	TREX1	84	38.182	ENSMPUG00000019552	TREX2	91	38.182	Mustela_putorius_furo
ENSEBUG00000006412	TREX1	84	39.091	ENSMLUG00000027143	TREX2	91	39.091	Myotis_lucifugus
ENSEBUG00000006412	TREX1	83	35.945	ENSMEUG00000016646	TREX2	93	35.945	Notamacropus_eugenii
ENSEBUG00000006412	TREX1	84	38.636	ENSODEG00000019142	TREX2	83	38.636	Octodon_degus
ENSEBUG00000006412	TREX1	83	39.815	ENSOANG00000000686	TREX2	90	39.815	Ornithorhynchus_anatinus
ENSEBUG00000006412	TREX1	87	36.564	ENSOGAG00000033175	TREX2	87	36.564	Otolemur_garnettii
ENSEBUG00000006412	TREX1	83	38.914	ENSPPRG00000017457	TREX2	89	38.914	Panthera_pardus
ENSEBUG00000006412	TREX1	83	39.336	ENSPSIG00000006116	TREX2	87	39.336	Pelodiscus_sinensis
ENSEBUG00000006412	TREX1	82	38.710	ENSPEMG00000004918	Trex2	89	38.710	Peromyscus_maniculatus_bairdii
ENSEBUG00000006412	TREX1	83	36.866	ENSPCIG00000009700	TREX2	89	36.866	Phascolarctos_cinereus
ENSEBUG00000006412	TREX1	84	39.545	ENSPCAG00000005411	TREX2	82	39.545	Procavia_capensis
ENSEBUG00000006412	TREX1	84	38.636	ENSPVAG00000001122	TREX2	78	38.636	Pteropus_vampyrus
ENSEBUG00000006412	TREX1	84	38.182	ENSRNOG00000056983	Trex2	91	38.182	Rattus_norvegicus
ENSEBUG00000006412	TREX1	76	38.000	ENSSHAG00000004059	TREX2	81	38.000	Sarcophilus_harrisii
ENSEBUG00000006412	TREX1	86	41.441	ENSSPUG00000015575	-	92	41.441	Sphenodon_punctatus
ENSEBUG00000006412	TREX1	84	46.296	ENSSPUG00000012485	-	86	46.296	Sphenodon_punctatus
ENSEBUG00000006412	TREX1	84	46.296	ENSSPUG00000012467	-	86	46.296	Sphenodon_punctatus
ENSEBUG00000006412	TREX1	84	46.296	ENSSPUG00000012496	-	85	46.296	Sphenodon_punctatus
ENSEBUG00000006412	TREX1	84	46.296	ENSSPUG00000012477	-	86	46.296	Sphenodon_punctatus
ENSEBUG00000006412	TREX1	89	37.229	ENSUAMG00000027544	TREX2	84	37.229	Ursus_americanus
ENSEBUG00000006412	TREX1	84	38.636	ENSVVUG00000029714	TREX2	80	38.636	Vulpes_vulpes