EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000006528 (Gene tree)
Gene ID: -
Gene Symbol: arl13b
Alias: arl2l1|chunp6872|dkfzp761h079|fc23g07|scorpion|un-named hi459|unm hi459|wu:fc23g07|zgc:123149
Full Name: ADP-ribosylation factor-like 13b
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 187818 bases
Position: chrFYBX02009600.1:1727952-1915769
Accession: ZDB-GENE-021217-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000010192	MMR_HSR1	PF01926.23	6e-06	1	1
ENSEBUP00000010158	MMR_HSR1	PF01926.23	6.5e-06	1	1
ENSEBUP00000010178	MMR_HSR1	PF01926.23	6.5e-06	1	1
ENSEBUP00000010218	MMR_HSR1	PF01926.23	6.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000010762	-	3221	-	ENSEBUP00000010218	293 (aa)	-	-
ENSEBUT00000010720	-	2203	-	ENSEBUP00000010178	291 (aa)	-	-
ENSEBUT00000010699	-	2294	-	ENSEBUP00000010158	291 (aa)	-	-
ENSEBUT00000010735	-	3364	-	ENSEBUP00000010192	267 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000006528's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000006528's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000006528	arl13b	59	36.047	ENSEBUG00000014954	arl2	73	36.047
ENSEBUG00000006528	arl13b	53	35.616	ENSEBUG00000011004	arl6	78	35.616
ENSEBUG00000006528	arl13b	52	32.624	ENSEBUG00000010483	-	76	32.624
ENSEBUG00000006528	arl13b	50	37.226	ENSEBUG00000005056	arl4aa	63	37.226
ENSEBUG00000006528	arl13b	52	31.915	ENSEBUG00000009183	arl8ba	76	31.915
ENSEBUG00000006528	arl13b	56	33.758	ENSEBUG00000013459	arfrp1	65	33.758
ENSEBUG00000006528	arl13b	70	31.383	ENSEBUG00000016195	arl15b	84	31.383
ENSEBUG00000006528	arl13b	53	34.752	ENSEBUG00000004484	-	84	34.752
ENSEBUG00000006528	arl13b	50	37.037	ENSEBUG00000004741	arl4cb	67	37.037
ENSEBUG00000006528	arl13b	70	30.457	ENSEBUG00000011723	sar1b	97	30.964
ENSEBUG00000006528	arl13b	70	30.319	ENSEBUG00000016527	-	80	30.319
ENSEBUG00000006528	arl13b	61	30.178	ENSEBUG00000007051	-	84	30.178
ENSEBUG00000006528	arl13b	58	37.013	ENSEBUG00000005272	arf2b	74	37.013

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000006528	arl13b	90	49.627	ENSAPOG00000013256	arl13b	65	52.612	Acanthochromis_polyacanthus
ENSEBUG00000006528	arl13b	90	52.060	ENSACIG00000017582	arl13b	99	53.909	Amphilophus_citrinellus
ENSEBUG00000006528	arl13b	90	49.627	ENSAOCG00000002828	arl13b	69	52.612	Amphiprion_ocellaris
ENSEBUG00000006528	arl13b	90	49.627	ENSAPEG00000014654	arl13b	69	52.612	Amphiprion_percula
ENSEBUG00000006528	arl13b	84	53.012	ENSATEG00000017586	arl13b	66	52.381	Anabas_testudineus
ENSEBUG00000006528	arl13b	90	51.128	ENSACAG00000000523	ARL13B	64	51.128	Anolis_carolinensis
ENSEBUG00000006528	arl13b	91	48.327	ENSACLG00000024227	arl13b	91	56.744	Astatotilapia_calliptera
ENSEBUG00000006528	arl13b	90	50.746	ENSAMXG00000042824	arl13b	69	51.866	Astyanax_mexicanus
ENSEBUG00000006528	arl13b	77	53.398	ENSCAPG00000006764	ARL13B	58	53.398	Cavia_aperea
ENSEBUG00000006528	arl13b	82	51.802	ENSCPOG00000002558	ARL13B	58	51.802	Cavia_porcellus
ENSEBUG00000006528	arl13b	83	49.799	ENSCLAG00000006379	ARL13B	60	49.799	Chinchilla_lanigera
ENSEBUG00000006528	arl13b	90	52.985	ENSCPBG00000005599	ARL13B	66	52.985	Chrysemys_picta_bellii
ENSEBUG00000006528	arl13b	87	54.701	ENSCSEG00000005258	arl13b	68	54.701	Cynoglossus_semilaevis
ENSEBUG00000006528	arl13b	90	52.045	ENSCVAG00000001545	arl13b	96	52.869	Cyprinodon_variegatus
ENSEBUG00000006528	arl13b	90	49.627	ENSDARG00000012763	arl13b	88	55.217	Danio_rerio
ENSEBUG00000006528	arl13b	90	48.889	ENSEEUG00000010823	ARL13B	62	48.708	Erinaceus_europaeus
ENSEBUG00000006528	arl13b	90	49.624	ENSFALG00000001654	ARL13B	66	49.624	Ficedula_albicollis
ENSEBUG00000006528	arl13b	90	48.872	ENSFDAG00000006556	ARL13B	62	48.872	Fukomys_damarensis
ENSEBUG00000006528	arl13b	90	51.866	ENSFHEG00000016049	arl13b	70	52.222	Fundulus_heteroclitus
ENSEBUG00000006528	arl13b	84	52.209	ENSGMOG00000018628	arl13b	74	51.779	Gadus_morhua
ENSEBUG00000006528	arl13b	90	51.504	ENSGAFG00000000025	arl13b	84	55.507	Gambusia_affinis
ENSEBUG00000006528	arl13b	90	50.000	ENSGACG00000014228	arl13b	66	50.746	Gasterosteus_aculeatus
ENSEBUG00000006528	arl13b	90	50.746	ENSGAGG00000019336	ARL13B	66	52.612	Gopherus_agassizii
ENSEBUG00000006528	arl13b	91	48.327	ENSHBUG00000020619	arl13b	69	51.301	Haplochromis_burtoni
ENSEBUG00000006528	arl13b	90	49.627	ENSHCOG00000006106	arl13b	70	52.612	Hippocampus_comes
ENSEBUG00000006528	arl13b	90	51.866	ENSKMAG00000001122	arl13b	66	51.866	Kryptolebias_marmoratus
ENSEBUG00000006528	arl13b	90	49.624	ENSLBEG00000014612	arl13b	69	51.504	Labrus_bergylta
ENSEBUG00000006528	arl13b	90	52.612	ENSLOCG00000010465	arl13b	62	52.612	Lepisosteus_oculatus
ENSEBUG00000006528	arl13b	90	52.239	ENSMAMG00000021452	arl13b	69	52.239	Mastacembelus_armatus
ENSEBUG00000006528	arl13b	91	48.327	ENSMZEG00005017827	arl13b	69	51.301	Maylandia_zebra
ENSEBUG00000006528	arl13b	91	52.045	ENSMMOG00000010253	arl13b	69	52.045	Mola_mola
ENSEBUG00000006528	arl13b	87	56.034	ENSMALG00000014655	arl13b	72	56.034	Monopterus_albus
ENSEBUG00000006528	arl13b	90	49.430	MGP_CAROLIEiJ_G0020856	Arl13b	62	49.430	Mus_caroli
ENSEBUG00000006528	arl13b	90	49.430	ENSMUSG00000022911	Arl13b	62	49.430	Mus_musculus
ENSEBUG00000006528	arl13b	90	46.667	MGP_PahariEiJ_G0016561	Arl13b	62	49.259	Mus_pahari
ENSEBUG00000006528	arl13b	90	49.430	MGP_SPRETEiJ_G0021763	Arl13b	62	49.430	Mus_spretus
ENSEBUG00000006528	arl13b	84	49.798	ENSMLUG00000017473	ARL13B	58	49.609	Myotis_lucifugus
ENSEBUG00000006528	arl13b	85	55.947	ENSNBRG00000004078	arl13b	95	54.167	Neolamprologus_brichardi
ENSEBUG00000006528	arl13b	90	48.485	ENSNLEG00000001772	ARL13B	62	48.485	Nomascus_leucogenys
ENSEBUG00000006528	arl13b	79	56.190	ENSMEUG00000008036	-	60	51.012	Notamacropus_eugenii
ENSEBUG00000006528	arl13b	90	48.496	ENSODEG00000011381	ARL13B	62	48.872	Octodon_degus
ENSEBUG00000006528	arl13b	90	48.507	ENSONIG00000001864	arl13b	62	51.493	Oreochromis_niloticus
ENSEBUG00000006528	arl13b	91	52.985	ENSORLG00000006350	arl13b	91	56.087	Oryzias_latipes
ENSEBUG00000006528	arl13b	91	53.358	ENSORLG00020013754	arl13b	68	53.358	Oryzias_latipes_hni
ENSEBUG00000006528	arl13b	91	52.985	ENSORLG00015012586	arl13b	68	52.985	Oryzias_latipes_hsok
ENSEBUG00000006528	arl13b	81	52.074	ENSOMEG00000010187	arl13b	90	52.814	Oryzias_melastigma
ENSEBUG00000006528	arl13b	90	54.135	ENSPSIG00000018115	ARL13B	65	54.135	Pelodiscus_sinensis
ENSEBUG00000006528	arl13b	90	51.493	ENSPMGG00000004584	arl13b	67	51.493	Periophthalmus_magnuspinnatus
ENSEBUG00000006528	arl13b	84	48.413	ENSPCIG00000026984	ARL13B	58	48.413	Phascolarctos_cinereus
ENSEBUG00000006528	arl13b	90	52.239	ENSPFOG00000005379	arl13b	67	52.239	Poecilia_formosa
ENSEBUG00000006528	arl13b	90	52.239	ENSPLAG00000008699	arl13b	71	52.239	Poecilia_latipinna
ENSEBUG00000006528	arl13b	84	53.414	ENSPMEG00000015387	arl13b	64	52.610	Poecilia_mexicana
ENSEBUG00000006528	arl13b	90	51.493	ENSPREG00000006291	arl13b	68	51.493	Poecilia_reticulata
ENSEBUG00000006528	arl13b	85	48.800	ENSPNYG00000022879	arl13b	67	52.000	Pundamilia_nyererei
ENSEBUG00000006528	arl13b	90	51.111	ENSPNAG00000003803	arl13b	67	51.685	Pygocentrus_nattereri
ENSEBUG00000006528	arl13b	73	52.284	ENSSFOG00015023057	arl13b	77	52.284	Scleropages_formosus
ENSEBUG00000006528	arl13b	82	55.455	ENSSFOG00015005491	arl13b	86	55.455	Scleropages_formosus
ENSEBUG00000006528	arl13b	91	48.889	ENSSMAG00000015450	arl13b	69	48.889	Scophthalmus_maximus
ENSEBUG00000006528	arl13b	90	48.881	ENSSDUG00000005560	arl13b	67	51.866	Seriola_dumerili
ENSEBUG00000006528	arl13b	90	48.881	ENSSLDG00000013361	arl13b	69	51.866	Seriola_lalandi_dorsalis
ENSEBUG00000006528	arl13b	90	48.134	ENSSARG00000003872	ARL13B	62	49.630	Sorex_araneus
ENSEBUG00000006528	arl13b	86	53.913	ENSSPUG00000006649	ARL13B	93	53.913	Sphenodon_punctatus
ENSEBUG00000006528	arl13b	90	51.866	ENSSPAG00000016442	arl13b	62	52.612	Stegastes_partitus
ENSEBUG00000006528	arl13b	86	52.609	ENSTGUG00000013493	ARL13B	63	49.071	Taeniopygia_guttata
ENSEBUG00000006528	arl13b	85	51.982	ENSTRUG00000013035	-	90	51.515	Takifugu_rubripes
ENSEBUG00000006528	arl13b	81	52.778	ENSTRUG00000003641	arl13b	82	52.778	Takifugu_rubripes
ENSEBUG00000006528	arl13b	90	48.120	ENSVVUG00000021511	ARL13B	65	48.872	Vulpes_vulpes
ENSEBUG00000006528	arl13b	85	38.889	ENSXETG00000026166	arl13a	57	38.889	Xenopus_tropicalis
ENSEBUG00000006528	arl13b	90	51.698	ENSXETG00000032383	ARL13B	96	51.698	Xenopus_tropicalis
ENSEBUG00000006528	arl13b	91	52.045	ENSXCOG00000016955	arl13b	73	51.673	Xiphophorus_couchianus
ENSEBUG00000006528	arl13b	90	52.239	ENSXMAG00000002089	arl13b	70	51.493	Xiphophorus_maculatus