EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000006535 (Gene tree)
Gene ID: -
Gene Symbol: tdp2a
Alias: -
Full Name: tyrosyl-DNA phosphodiesterase 2a
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 86694 bases
Position: chrFYBX02006215.1:235742-322435
Accession: ZDB-GENE-110218-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000010184	Exo_endo_phos	PF03372.23	7.3e-11	1	1
ENSEBUP00000010195	Exo_endo_phos	PF03372.23	7.3e-11	1	1
ENSEBUP00000010206	Exo_endo_phos	PF03372.23	7.3e-11	1	1
ENSEBUP00000010171	Exo_endo_phos	PF03372.23	9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000010738	-	2154	-	ENSEBUP00000010195	429 (aa)	-	-
ENSEBUT00000010713	-	2121	-	ENSEBUP00000010171	418 (aa)	-	-
ENSEBUT00000010727	-	1656	-	ENSEBUP00000010184	429 (aa)	-	-
ENSEBUT00000010749	-	1533	-	ENSEBUP00000010206	429 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000006535's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000006535's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000006535	tdp2a	62	53.008	ENSG00000111802	TDP2	87	53.008	Homo_sapiens
ENSEBUG00000006535	tdp2a	62	44.981	ENSAPOG00000018379	-	93	44.981	Acanthochromis_polyacanthus
ENSEBUG00000006535	tdp2a	59	52.941	ENSAMEG00000010230	TDP2	90	52.941	Ailuropoda_melanoleuca
ENSEBUG00000006535	tdp2a	59	44.531	ENSAPEG00000004208	-	91	44.531	Amphiprion_percula
ENSEBUG00000006535	tdp2a	73	41.379	ENSATEG00000010663	-	97	41.379	Anabas_testudineus
ENSEBUG00000006535	tdp2a	60	52.140	ENSACAG00000002332	TDP2	70	52.140	Anolis_carolinensis
ENSEBUG00000006535	tdp2a	61	53.409	ENSANAG00000020033	TDP2	72	53.409	Aotus_nancymaae
ENSEBUG00000006535	tdp2a	60	44.015	ENSACLG00000016132	tdp2b	87	44.015	Astatotilapia_calliptera
ENSEBUG00000006535	tdp2a	60	46.388	ENSACLG00000016148	tdp2b	93	46.388	Astatotilapia_calliptera
ENSEBUG00000006535	tdp2a	61	43.893	ENSACLG00000016174	tdp2b	88	43.893	Astatotilapia_calliptera
ENSEBUG00000006535	tdp2a	57	45.968	ENSAMXG00000036549	tdp2a	79	45.968	Astyanax_mexicanus
ENSEBUG00000006535	tdp2a	96	35.351	ENSAMXG00000011775	tdp2b	94	35.351	Astyanax_mexicanus
ENSEBUG00000006535	tdp2a	59	53.725	ENSBTAG00000000365	TDP2	70	53.725	Bos_taurus
ENSEBUG00000006535	tdp2a	57	36.759	WBGene00013405	tdpt-1	66	36.759	Caenorhabditis_elegans
ENSEBUG00000006535	tdp2a	62	53.008	ENSCJAG00000006074	TDP2	87	53.008	Callithrix_jacchus
ENSEBUG00000006535	tdp2a	62	52.256	ENSCJAG00000021963	-	73	52.256	Callithrix_jacchus
ENSEBUG00000006535	tdp2a	74	44.795	ENSCAFG00000010428	TDP2	97	50.175	Canis_familiaris
ENSEBUG00000006535	tdp2a	63	50.175	ENSCAFG00020009994	TDP2	97	50.175	Canis_lupus_dingo
ENSEBUG00000006535	tdp2a	62	53.731	ENSCHIG00000015294	-	90	53.731	Capra_hircus
ENSEBUG00000006535	tdp2a	59	54.510	ENSTSYG00000037199	TDP2	84	53.612	Carlito_syrichta
ENSEBUG00000006535	tdp2a	63	52.015	ENSCPOG00000006390	TDP2	76	52.015	Cavia_porcellus
ENSEBUG00000006535	tdp2a	62	53.383	ENSCCAG00000022734	TDP2	87	53.383	Cebus_capucinus
ENSEBUG00000006535	tdp2a	59	54.724	ENSCATG00000022076	TDP2	83	54.724	Cercocebus_atys
ENSEBUG00000006535	tdp2a	62	53.383	ENSCLAG00000002072	TDP2	74	53.383	Chinchilla_lanigera
ENSEBUG00000006535	tdp2a	59	54.724	ENSCSAG00000007769	TDP2	70	54.724	Chlorocebus_sabaeus
ENSEBUG00000006535	tdp2a	59	51.969	ENSCPBG00000006551	TDP2	64	51.969	Chrysemys_picta_bellii
ENSEBUG00000006535	tdp2a	59	54.331	ENSCANG00000040122	TDP2	83	54.331	Colobus_angolensis_palliatus
ENSEBUG00000006535	tdp2a	61	51.331	ENSCGRG00001000384	Tdp2	70	51.331	Cricetulus_griseus_chok1gshd
ENSEBUG00000006535	tdp2a	61	51.527	ENSCGRG00000010250	Tdp2	74	51.331	Cricetulus_griseus_crigri
ENSEBUG00000006535	tdp2a	60	44.402	ENSCVAG00000003114	tdp2b	72	44.402	Cyprinodon_variegatus
ENSEBUG00000006535	tdp2a	96	36.408	ENSDARG00000035954	tdp2b	92	36.408	Danio_rerio
ENSEBUG00000006535	tdp2a	57	42.449	ENSDARG00000069941	tdp2a	54	42.449	Danio_rerio
ENSEBUG00000006535	tdp2a	62	51.880	ENSDNOG00000044082	TDP2	72	51.880	Dasypus_novemcinctus
ENSEBUG00000006535	tdp2a	62	52.256	ENSETEG00000019096	TDP2	95	52.256	Echinops_telfairi
ENSEBUG00000006535	tdp2a	62	53.030	ENSEASG00005007656	TDP2	72	53.030	Equus_asinus_asinus
ENSEBUG00000006535	tdp2a	62	53.030	ENSECAG00000014264	TDP2	72	53.030	Equus_caballus
ENSEBUG00000006535	tdp2a	59	56.299	ENSEEUG00000010776	TDP2	71	56.299	Erinaceus_europaeus
ENSEBUG00000006535	tdp2a	58	45.783	ENSELUG00000009321	tdp2a	77	45.783	Esox_lucius
ENSEBUG00000006535	tdp2a	96	34.550	ENSELUG00000016449	tdp2b	93	34.550	Esox_lucius
ENSEBUG00000006535	tdp2a	59	53.150	ENSFCAG00000025612	TDP2	70	53.150	Felis_catus
ENSEBUG00000006535	tdp2a	66	47.163	ENSFALG00000004710	TDP2	78	47.163	Ficedula_albicollis
ENSEBUG00000006535	tdp2a	61	54.198	ENSFDAG00000006512	TDP2	90	54.198	Fukomys_damarensis
ENSEBUG00000006535	tdp2a	62	41.729	ENSFHEG00000013560	-	91	41.729	Fundulus_heteroclitus
ENSEBUG00000006535	tdp2a	65	47.292	ENSGALG00000013637	TDP2	75	47.292	Gallus_gallus
ENSEBUG00000006535	tdp2a	59	51.181	ENSGAGG00000002853	TDP2	65	51.181	Gopherus_agassizii
ENSEBUG00000006535	tdp2a	62	53.008	ENSGGOG00000014237	TDP2	87	53.008	Gorilla_gorilla
ENSEBUG00000006535	tdp2a	58	47.368	ENSHBUG00000002714	tdp2b	68	47.368	Haplochromis_burtoni
ENSEBUG00000006535	tdp2a	51	45.205	ENSHBUG00000005421	-	91	45.205	Haplochromis_burtoni
ENSEBUG00000006535	tdp2a	59	55.294	ENSHGLG00000008655	TDP2	71	55.294	Heterocephalus_glaber_female
ENSEBUG00000006535	tdp2a	59	55.294	ENSHGLG00100019087	TDP2	71	55.294	Heterocephalus_glaber_male
ENSEBUG00000006535	tdp2a	99	37.002	ENSIPUG00000013691	tdp2b	96	37.002	Ictalurus_punctatus
ENSEBUG00000006535	tdp2a	59	51.765	ENSJJAG00000021685	Tdp2	73	51.765	Jaculus_jaculus
ENSEBUG00000006535	tdp2a	58	44.400	ENSKMAG00000015485	-	80	44.400	Kryptolebias_marmoratus
ENSEBUG00000006535	tdp2a	59	49.213	ENSLACG00000008852	TDP2	69	49.213	Latimeria_chalumnae
ENSEBUG00000006535	tdp2a	58	47.177	ENSLOCG00000005817	tdp2b	88	47.177	Lepisosteus_oculatus
ENSEBUG00000006535	tdp2a	59	54.118	ENSLAFG00000002567	TDP2	72	54.118	Loxodonta_africana
ENSEBUG00000006535	tdp2a	59	54.724	ENSMFAG00000045296	TDP2	83	54.724	Macaca_fascicularis
ENSEBUG00000006535	tdp2a	59	54.724	ENSMMUG00000009803	TDP2	70	54.724	Macaca_mulatta
ENSEBUG00000006535	tdp2a	59	54.724	ENSMNEG00000038003	TDP2	83	54.724	Macaca_nemestrina
ENSEBUG00000006535	tdp2a	59	54.724	ENSMLEG00000028883	TDP2	83	54.724	Mandrillus_leucophaeus
ENSEBUG00000006535	tdp2a	59	45.817	ENSMAMG00000013654	tdp2b	70	45.817	Mastacembelus_armatus
ENSEBUG00000006535	tdp2a	59	46.565	ENSMZEG00005004077	tdp2b	89	46.565	Maylandia_zebra
ENSEBUG00000006535	tdp2a	60	40.800	ENSMZEG00005003980	-	81	40.800	Maylandia_zebra
ENSEBUG00000006535	tdp2a	58	47.773	ENSMZEG00005003950	tdp2b	68	47.773	Maylandia_zebra
ENSEBUG00000006535	tdp2a	61	43.893	ENSMZEG00005004103	tdp2b	88	43.893	Maylandia_zebra
ENSEBUG00000006535	tdp2a	59	45.703	ENSMZEG00005004153	tdp2b	90	45.703	Maylandia_zebra
ENSEBUG00000006535	tdp2a	60	45.174	ENSMZEG00005004055	tdp2b	85	45.174	Maylandia_zebra
ENSEBUG00000006535	tdp2a	63	43.333	ENSMZEG00005004126	tdp2b	88	44.402	Maylandia_zebra
ENSEBUG00000006535	tdp2a	62	49.434	ENSMGAG00000008014	TDP2	71	49.434	Meleagris_gallopavo
ENSEBUG00000006535	tdp2a	61	51.711	ENSMAUG00000014451	Tdp2	70	51.711	Mesocricetus_auratus
ENSEBUG00000006535	tdp2a	62	53.759	ENSMICG00000000039	TDP2	89	53.759	Microcebus_murinus
ENSEBUG00000006535	tdp2a	61	51.711	ENSMOCG00000002823	Tdp2	70	51.711	Microtus_ochrogaster
ENSEBUG00000006535	tdp2a	51	52.336	ENSMODG00000011653	TDP2	65	52.336	Monodelphis_domestica
ENSEBUG00000006535	tdp2a	57	45.082	ENSMALG00000005368	-	82	45.082	Monopterus_albus
ENSEBUG00000006535	tdp2a	61	52.471	MGP_CAROLIEiJ_G0018354	Tdp2	70	52.471	Mus_caroli
ENSEBUG00000006535	tdp2a	61	52.852	ENSMUSG00000035958	Tdp2	70	52.852	Mus_musculus
ENSEBUG00000006535	tdp2a	61	51.711	MGP_PahariEiJ_G0019417	Tdp2	70	51.711	Mus_pahari
ENSEBUG00000006535	tdp2a	61	52.852	MGP_SPRETEiJ_G0019220	Tdp2	70	52.852	Mus_spretus
ENSEBUG00000006535	tdp2a	59	53.725	ENSMPUG00000004516	TDP2	70	53.725	Mustela_putorius_furo
ENSEBUG00000006535	tdp2a	61	51.711	ENSMLUG00000013506	TDP2	73	51.711	Myotis_lucifugus
ENSEBUG00000006535	tdp2a	58	50.800	ENSNGAG00000001375	Tdp2	67	50.800	Nannospalax_galili
ENSEBUG00000006535	tdp2a	62	53.008	ENSNLEG00000002447	TDP2	84	53.008	Nomascus_leucogenys
ENSEBUG00000006535	tdp2a	65	50.896	ENSOPRG00000016299	TDP2	80	50.896	Ochotona_princeps
ENSEBUG00000006535	tdp2a	61	53.435	ENSODEG00000014018	TDP2	88	53.435	Octodon_degus
ENSEBUG00000006535	tdp2a	62	54.545	ENSOCUG00000013773	TDP2	73	54.545	Oryctolagus_cuniculus
ENSEBUG00000006535	tdp2a	58	43.145	ENSORLG00000001661	-	90	43.145	Oryzias_latipes
ENSEBUG00000006535	tdp2a	59	42.292	ENSORLG00020004634	-	90	43.145	Oryzias_latipes_hni
ENSEBUG00000006535	tdp2a	58	37.097	ENSORLG00015008190	-	89	37.097	Oryzias_latipes_hsok
ENSEBUG00000006535	tdp2a	59	42.520	ENSOMEG00000015899	-	94	41.961	Oryzias_melastigma
ENSEBUG00000006535	tdp2a	62	52.632	ENSOGAG00000025303	TDP2	72	52.632	Otolemur_garnettii
ENSEBUG00000006535	tdp2a	62	53.008	ENSPPAG00000029023	TDP2	87	53.008	Pan_paniscus
ENSEBUG00000006535	tdp2a	59	53.543	ENSPPRG00000015398	TDP2	70	53.543	Panthera_pardus
ENSEBUG00000006535	tdp2a	59	53.543	ENSPTIG00000018574	TDP2	86	53.543	Panthera_tigris_altaica
ENSEBUG00000006535	tdp2a	62	53.008	ENSPTRG00000017778	TDP2	87	53.008	Pan_troglodytes
ENSEBUG00000006535	tdp2a	59	55.512	ENSPANG00000017590	TDP2	83	55.512	Papio_anubis
ENSEBUG00000006535	tdp2a	60	47.287	ENSPKIG00000006483	tdp2b	69	47.287	Paramormyrops_kingsleyae
ENSEBUG00000006535	tdp2a	59	51.181	ENSPSIG00000004948	TDP2	87	51.181	Pelodiscus_sinensis
ENSEBUG00000006535	tdp2a	65	49.110	ENSPEMG00000001788	Tdp2	75	49.110	Peromyscus_maniculatus_bairdii
ENSEBUG00000006535	tdp2a	59	47.212	ENSPMAG00000001570	tdp2b	98	47.212	Petromyzon_marinus
ENSEBUG00000006535	tdp2a	59	49.213	ENSPCIG00000007316	TDP2	66	49.213	Phascolarctos_cinereus
ENSEBUG00000006535	tdp2a	59	41.667	ENSPFOG00000017990	-	90	41.667	Poecilia_formosa
ENSEBUG00000006535	tdp2a	57	42.276	ENSPLAG00000019439	-	78	42.276	Poecilia_latipinna
ENSEBUG00000006535	tdp2a	58	42.400	ENSPMEG00000010824	-	84	42.400	Poecilia_mexicana
ENSEBUG00000006535	tdp2a	62	52.632	ENSPPYG00000016282	TDP2	67	52.632	Pongo_abelii
ENSEBUG00000006535	tdp2a	62	52.632	ENSPCOG00000021415	TDP2	93	52.632	Propithecus_coquereli
ENSEBUG00000006535	tdp2a	66	38.926	ENSPNYG00000011504	tdp2b	97	38.926	Pundamilia_nyererei
ENSEBUG00000006535	tdp2a	58	48.178	ENSPNYG00000011532	tdp2b	68	48.178	Pundamilia_nyererei
ENSEBUG00000006535	tdp2a	57	45.492	ENSPNAG00000022162	tdp2a	62	45.492	Pygocentrus_nattereri
ENSEBUG00000006535	tdp2a	61	51.711	ENSRNOG00000018246	Tdp2	71	51.711	Rattus_norvegicus
ENSEBUG00000006535	tdp2a	59	54.331	ENSRBIG00000037119	TDP2	83	54.331	Rhinopithecus_bieti
ENSEBUG00000006535	tdp2a	59	54.331	ENSRROG00000005025	TDP2	83	54.331	Rhinopithecus_roxellana
ENSEBUG00000006535	tdp2a	62	53.759	ENSSBOG00000028734	TDP2	87	53.759	Saimiri_boliviensis_boliviensis
ENSEBUG00000006535	tdp2a	59	51.181	ENSSHAG00000002506	TDP2	67	51.181	Sarcophilus_harrisii
ENSEBUG00000006535	tdp2a	59	47.755	ENSSFOG00015011322	-	69	46.964	Scleropages_formosus
ENSEBUG00000006535	tdp2a	59	51.969	ENSSARG00000013547	TDP2	90	51.969	Sorex_araneus
ENSEBUG00000006535	tdp2a	68	47.423	ENSSPUG00000008288	TDP2	78	47.423	Sphenodon_punctatus
ENSEBUG00000006535	tdp2a	62	52.985	ENSSSCG00000001092	TDP2	73	52.985	Sus_scrofa
ENSEBUG00000006535	tdp2a	59	48.819	ENSTGUG00000009035	TDP2	97	48.819	Taeniopygia_guttata
ENSEBUG00000006535	tdp2a	64	44.526	ENSTRUG00000014347	tdp2b	74	44.526	Takifugu_rubripes
ENSEBUG00000006535	tdp2a	58	46.371	ENSTRUG00000012218	-	86	46.371	Takifugu_rubripes
ENSEBUG00000006535	tdp2a	58	45.382	ENSTNIG00000010260	TDP2	94	45.382	Tetraodon_nigroviridis
ENSEBUG00000006535	tdp2a	61	44.656	ENSTNIG00000017792	tdp2b	72	44.656	Tetraodon_nigroviridis
ENSEBUG00000006535	tdp2a	59	56.078	ENSTTRG00000016376	TDP2	72	54.545	Tursiops_truncatus
ENSEBUG00000006535	tdp2a	59	52.549	ENSUAMG00000025939	TDP2	73	52.549	Ursus_americanus
ENSEBUG00000006535	tdp2a	63	49.474	ENSUMAG00000020111	TDP2	94	49.474	Ursus_maritimus
ENSEBUG00000006535	tdp2a	99	37.736	ENSXETG00000014826	tdp2	94	37.736	Xenopus_tropicalis
ENSEBUG00000006535	tdp2a	66	41.017	ENSXCOG00000010778	-	82	41.017	Xiphophorus_couchianus
ENSEBUG00000006535	tdp2a	62	42.007	ENSXMAG00000022252	-	78	42.007	Xiphophorus_maculatus