EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000006548 (Gene tree)
Gene ID: -
Gene Symbol: prpf8
Alias: -
Full Name: pre-mRNA processing factor 8
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 95396 bases
Position: chrFYBX02009901.1:470818-566213
Accession: ZDB-GENE-030131-577
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000010303	RRM_4	PF10598.9	7.6e-14	1	1
ENSEBUP00000010303	U5_2-snRNA_bdg	PF10597.9	6.7e-74	1	1
ENSEBUP00000010303	PRO8NT	PF08082.11	8.1e-86	1	1
ENSEBUP00000010303	U6-snRNA_bdg	PF10596.9	2.1e-88	1	1
ENSEBUP00000010303	PROCN	PF08083.11	7.5e-234	1	1
ENSEBUP00000010303	PRP8_domainIV	PF12134.8	8.8e-130	1	1
ENSEBUP00000010303	PROCT	PF08084.11	2.2e-54	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000010848	-	6882	-	ENSEBUP00000010303	2293 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000006548's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000006548's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000006548	prpf8	99	93.729	ENSG00000174231	PRPF8	99	93.729	Homo_sapiens
ENSEBUG00000006548	prpf8	99	93.562	ENSAPOG00000010079	prpf8	99	93.562	Acanthochromis_polyacanthus
ENSEBUG00000006548	prpf8	99	93.729	ENSAMEG00000007940	PRPF8	99	93.729	Ailuropoda_melanoleuca
ENSEBUG00000006548	prpf8	99	92.721	ENSACIG00000018280	prpf8	98	92.721	Amphilophus_citrinellus
ENSEBUG00000006548	prpf8	99	93.562	ENSAOCG00000010725	prpf8	99	93.562	Amphiprion_ocellaris
ENSEBUG00000006548	prpf8	99	93.562	ENSAPEG00000014397	prpf8	99	93.562	Amphiprion_percula
ENSEBUG00000006548	prpf8	99	93.574	ENSATEG00000010062	prpf8	98	93.574	Anabas_testudineus
ENSEBUG00000006548	prpf8	96	94.175	ENSAPLG00000010357	PRPF8	100	94.175	Anas_platyrhynchos
ENSEBUG00000006548	prpf8	81	92.618	ENSACAG00000014784	PRPF8	98	92.618	Anolis_carolinensis
ENSEBUG00000006548	prpf8	99	93.729	ENSANAG00000032629	PRPF8	99	93.729	Aotus_nancymaae
ENSEBUG00000006548	prpf8	99	94.051	ENSACLG00000020858	prpf8	99	94.051	Astatotilapia_calliptera
ENSEBUG00000006548	prpf8	99	93.419	ENSAMXG00000020291	prpf8	99	93.419	Astyanax_mexicanus
ENSEBUG00000006548	prpf8	99	93.729	ENSBTAG00000011488	PRPF8	99	93.729	Bos_taurus
ENSEBUG00000006548	prpf8	99	84.285	WBGene00004187	prp-8	99	84.972	Caenorhabditis_elegans
ENSEBUG00000006548	prpf8	99	93.729	ENSCJAG00000001911	PRPF8	99	93.729	Callithrix_jacchus
ENSEBUG00000006548	prpf8	99	93.729	ENSCAFG00000019221	PRPF8	99	93.729	Canis_familiaris
ENSEBUG00000006548	prpf8	96	94.335	ENSCAFG00020009943	PRPF8	100	94.335	Canis_lupus_dingo
ENSEBUG00000006548	prpf8	99	93.729	ENSCHIG00000017499	PRPF8	99	93.729	Capra_hircus
ENSEBUG00000006548	prpf8	99	93.729	ENSTSYG00000014120	PRPF8	99	93.729	Carlito_syrichta
ENSEBUG00000006548	prpf8	96	92.119	ENSCAPG00000009459	PRPF8	99	92.119	Cavia_aperea
ENSEBUG00000006548	prpf8	99	93.729	ENSCPOG00000010379	PRPF8	99	93.729	Cavia_porcellus
ENSEBUG00000006548	prpf8	99	93.729	ENSCCAG00000031983	-	99	93.729	Cebus_capucinus
ENSEBUG00000006548	prpf8	99	93.729	ENSCATG00000038595	PRPF8	99	93.729	Cercocebus_atys
ENSEBUG00000006548	prpf8	99	93.729	ENSCLAG00000004388	PRPF8	99	93.729	Chinchilla_lanigera
ENSEBUG00000006548	prpf8	99	93.729	ENSCSAG00000013929	PRPF8	99	93.729	Chlorocebus_sabaeus
ENSEBUG00000006548	prpf8	80	94.667	ENSCHOG00000008590	PRPF8	88	94.667	Choloepus_hoffmanni
ENSEBUG00000006548	prpf8	99	93.720	ENSCPBG00000020409	PRPF8	99	93.720	Chrysemys_picta_bellii
ENSEBUG00000006548	prpf8	99	91.160	ENSCSAVG00000007825	-	100	89.844	Ciona_savignyi
ENSEBUG00000006548	prpf8	99	93.729	ENSCANG00000043088	PRPF8	99	93.729	Colobus_angolensis_palliatus
ENSEBUG00000006548	prpf8	73	97.244	ENSCGRG00000005129	Prpf8	100	97.244	Cricetulus_griseus_crigri
ENSEBUG00000006548	prpf8	99	93.617	ENSCSEG00000007905	prpf8	99	93.439	Cynoglossus_semilaevis
ENSEBUG00000006548	prpf8	99	93.490	ENSDARG00000026180	prpf8	99	93.490	Danio_rerio
ENSEBUG00000006548	prpf8	93	93.764	ENSDNOG00000018471	PRPF8	99	93.764	Dasypus_novemcinctus
ENSEBUG00000006548	prpf8	83	91.298	ENSDORG00000006185	Prpf8	94	92.375	Dipodomys_ordii
ENSEBUG00000006548	prpf8	99	89.315	FBgn0033688	Prp8	96	89.757	Drosophila_melanogaster
ENSEBUG00000006548	prpf8	99	88.617	ENSETEG00000017592	PRPF8	99	89.231	Echinops_telfairi
ENSEBUG00000006548	prpf8	99	93.729	ENSEASG00005009514	PRPF8	99	93.729	Equus_asinus_asinus
ENSEBUG00000006548	prpf8	97	94.376	ENSECAG00000021318	PRPF8	100	94.376	Equus_caballus
ENSEBUG00000006548	prpf8	66	97.778	ENSEEUG00000012120	-	66	97.778	Erinaceus_europaeus
ENSEBUG00000006548	prpf8	98	92.412	ENSELUG00000007120	prpf8	99	92.412	Esox_lucius
ENSEBUG00000006548	prpf8	99	93.729	ENSFCAG00000006297	PRPF8	99	93.729	Felis_catus
ENSEBUG00000006548	prpf8	99	93.763	ENSFALG00000006628	PRPF8	99	93.763	Ficedula_albicollis
ENSEBUG00000006548	prpf8	99	93.729	ENSFDAG00000004711	PRPF8	99	93.729	Fukomys_damarensis
ENSEBUG00000006548	prpf8	99	93.305	ENSFHEG00000021084	prpf8	99	93.305	Fundulus_heteroclitus
ENSEBUG00000006548	prpf8	99	91.885	ENSGMOG00000002028	prpf8	98	91.885	Gadus_morhua
ENSEBUG00000006548	prpf8	99	93.763	ENSGALG00000002943	PRPF8	99	93.763	Gallus_gallus
ENSEBUG00000006548	prpf8	99	93.353	ENSGAFG00000010337	prpf8	99	93.353	Gambusia_affinis
ENSEBUG00000006548	prpf8	99	93.422	ENSGACG00000008504	prpf8	100	92.918	Gasterosteus_aculeatus
ENSEBUG00000006548	prpf8	99	93.723	ENSGAGG00000008350	PRPF8	99	93.723	Gopherus_agassizii
ENSEBUG00000006548	prpf8	99	93.729	ENSGGOG00000005516	PRPF8	99	93.729	Gorilla_gorilla
ENSEBUG00000006548	prpf8	99	93.262	ENSHBUG00000016192	prpf8	99	93.262	Haplochromis_burtoni
ENSEBUG00000006548	prpf8	99	93.729	ENSHGLG00000012029	PRPF8	99	93.729	Heterocephalus_glaber_female
ENSEBUG00000006548	prpf8	99	93.729	ENSHGLG00100016494	PRPF8	99	93.729	Heterocephalus_glaber_male
ENSEBUG00000006548	prpf8	99	93.310	ENSHCOG00000016414	prpf8	99	93.310	Hippocampus_comes
ENSEBUG00000006548	prpf8	99	93.133	ENSIPUG00000023230	prpf8	99	93.133	Ictalurus_punctatus
ENSEBUG00000006548	prpf8	99	93.729	ENSSTOG00000005128	PRPF8	99	93.729	Ictidomys_tridecemlineatus
ENSEBUG00000006548	prpf8	99	91.874	ENSJJAG00000021159	Prpf8	99	92.525	Jaculus_jaculus
ENSEBUG00000006548	prpf8	99	93.433	ENSKMAG00000016118	prpf8	99	93.433	Kryptolebias_marmoratus
ENSEBUG00000006548	prpf8	99	93.348	ENSLBEG00000026903	prpf8	99	93.348	Labrus_bergylta
ENSEBUG00000006548	prpf8	94	91.565	ENSLACG00000010479	PRPF8	99	94.254	Latimeria_chalumnae
ENSEBUG00000006548	prpf8	99	93.059	ENSLOCG00000005409	prpf8	99	93.059	Lepisosteus_oculatus
ENSEBUG00000006548	prpf8	99	93.729	ENSLAFG00000015445	PRPF8	99	93.729	Loxodonta_africana
ENSEBUG00000006548	prpf8	99	93.729	ENSMFAG00000039995	PRPF8	99	93.729	Macaca_fascicularis
ENSEBUG00000006548	prpf8	99	93.729	ENSMMUG00000004820	PRPF8	99	93.729	Macaca_mulatta
ENSEBUG00000006548	prpf8	99	93.729	ENSMNEG00000035713	PRPF8	99	93.729	Macaca_nemestrina
ENSEBUG00000006548	prpf8	99	93.729	ENSMLEG00000037937	PRPF8	99	93.729	Mandrillus_leucophaeus
ENSEBUG00000006548	prpf8	99	93.476	ENSMAMG00000008919	prpf8	99	93.476	Mastacembelus_armatus
ENSEBUG00000006548	prpf8	99	93.276	ENSMZEG00005015073	prpf8	99	93.276	Maylandia_zebra
ENSEBUG00000006548	prpf8	99	93.763	ENSMGAG00000004769	PRPF8	99	93.763	Meleagris_gallopavo
ENSEBUG00000006548	prpf8	99	93.729	ENSMICG00000010320	PRPF8	99	93.729	Microcebus_murinus
ENSEBUG00000006548	prpf8	99	93.729	ENSMOCG00000016838	Prpf8	99	93.729	Microtus_ochrogaster
ENSEBUG00000006548	prpf8	99	93.090	ENSMMOG00000011887	prpf8	99	93.090	Mola_mola
ENSEBUG00000006548	prpf8	99	93.643	ENSMODG00000010480	PRPF8	99	93.643	Monodelphis_domestica
ENSEBUG00000006548	prpf8	96	95.517	ENSMALG00000003558	prpf8	98	95.517	Monopterus_albus
ENSEBUG00000006548	prpf8	99	93.771	MGP_CAROLIEiJ_G0016740	Prpf8	99	93.771	Mus_caroli
ENSEBUG00000006548	prpf8	99	93.771	ENSMUSG00000020850	Prpf8	99	93.771	Mus_musculus
ENSEBUG00000006548	prpf8	99	93.729	MGP_PahariEiJ_G0017877	Prpf8	99	93.729	Mus_pahari
ENSEBUG00000006548	prpf8	99	93.771	MGP_SPRETEiJ_G0017583	Prpf8	99	93.771	Mus_spretus
ENSEBUG00000006548	prpf8	99	93.729	ENSMPUG00000013227	PRPF8	99	93.729	Mustela_putorius_furo
ENSEBUG00000006548	prpf8	99	93.608	ENSMLUG00000002666	PRPF8	99	93.608	Myotis_lucifugus
ENSEBUG00000006548	prpf8	99	92.089	ENSNGAG00000005305	Prpf8	99	92.742	Nannospalax_galili
ENSEBUG00000006548	prpf8	99	93.319	ENSNBRG00000013127	prpf8	99	93.319	Neolamprologus_brichardi
ENSEBUG00000006548	prpf8	99	88.316	ENSNLEG00000000897	PRPF8	98	88.316	Nomascus_leucogenys
ENSEBUG00000006548	prpf8	99	93.831	ENSMEUG00000015999	PRPF8	100	93.831	Notamacropus_eugenii
ENSEBUG00000006548	prpf8	99	92.311	ENSOPRG00000003102	PRPF8	99	92.311	Ochotona_princeps
ENSEBUG00000006548	prpf8	99	93.729	ENSODEG00000008468	PRPF8	99	93.729	Octodon_degus
ENSEBUG00000006548	prpf8	99	93.519	ENSONIG00000008153	prpf8	99	93.519	Oreochromis_niloticus
ENSEBUG00000006548	prpf8	85	96.916	ENSOANG00000004250	PRPF8	98	96.916	Ornithorhynchus_anatinus
ENSEBUG00000006548	prpf8	99	93.729	ENSOCUG00000000081	PRPF8	99	93.729	Oryctolagus_cuniculus
ENSEBUG00000006548	prpf8	99	93.433	ENSORLG00000008036	prpf8	99	93.433	Oryzias_latipes
ENSEBUG00000006548	prpf8	99	93.393	ENSORLG00020021070	prpf8	99	93.393	Oryzias_latipes_hni
ENSEBUG00000006548	prpf8	99	93.433	ENSORLG00015002340	prpf8	99	93.433	Oryzias_latipes_hsok
ENSEBUG00000006548	prpf8	99	91.869	ENSOMEG00000016866	prpf8	98	92.401	Oryzias_melastigma
ENSEBUG00000006548	prpf8	99	93.608	ENSOARG00000013312	PRPF8	99	93.608	Ovis_aries
ENSEBUG00000006548	prpf8	99	93.729	ENSPPAG00000042753	PRPF8	99	93.729	Pan_paniscus
ENSEBUG00000006548	prpf8	99	93.729	ENSPPRG00000008746	PRPF8	99	93.729	Panthera_pardus
ENSEBUG00000006548	prpf8	99	93.643	ENSPTIG00000019200	PRPF8	99	93.643	Panthera_tigris_altaica
ENSEBUG00000006548	prpf8	99	93.729	ENSPTRG00000039576	PRPF8	99	93.729	Pan_troglodytes
ENSEBUG00000006548	prpf8	99	94.317	ENSPANG00000024607	PRPF8	99	94.317	Papio_anubis
ENSEBUG00000006548	prpf8	99	93.236	ENSPKIG00000011201	prpf8	99	93.236	Paramormyrops_kingsleyae
ENSEBUG00000006548	prpf8	99	93.677	ENSPSIG00000013393	PRPF8	99	93.677	Pelodiscus_sinensis
ENSEBUG00000006548	prpf8	99	93.729	ENSPEMG00000021699	Prpf8	99	93.729	Peromyscus_maniculatus_bairdii
ENSEBUG00000006548	prpf8	96	93.366	ENSPMAG00000005438	prpf8	100	93.366	Petromyzon_marinus
ENSEBUG00000006548	prpf8	99	93.643	ENSPCIG00000022603	PRPF8	100	94.246	Phascolarctos_cinereus
ENSEBUG00000006548	prpf8	99	93.433	ENSPFOG00000007005	prpf8	99	93.433	Poecilia_formosa
ENSEBUG00000006548	prpf8	99	92.172	ENSPLAG00000020777	prpf8	99	92.172	Poecilia_latipinna
ENSEBUG00000006548	prpf8	99	93.433	ENSPMEG00000004051	prpf8	99	93.433	Poecilia_mexicana
ENSEBUG00000006548	prpf8	99	93.333	ENSPREG00000021902	prpf8	99	93.333	Poecilia_reticulata
ENSEBUG00000006548	prpf8	99	93.729	ENSPPYG00000007777	PRPF8	99	93.729	Pongo_abelii
ENSEBUG00000006548	prpf8	90	94.059	ENSPCAG00000008938	PRPF8	87	94.377	Procavia_capensis
ENSEBUG00000006548	prpf8	99	93.729	ENSPCOG00000015182	PRPF8	99	93.729	Propithecus_coquereli
ENSEBUG00000006548	prpf8	92	94.623	ENSPVAG00000002134	PRPF8	93	94.623	Pteropus_vampyrus
ENSEBUG00000006548	prpf8	99	93.262	ENSPNYG00000016356	prpf8	99	93.262	Pundamilia_nyererei
ENSEBUG00000006548	prpf8	99	93.348	ENSPNAG00000009247	prpf8	99	93.348	Pygocentrus_nattereri
ENSEBUG00000006548	prpf8	99	93.771	ENSRNOG00000003495	Prpf8	99	93.771	Rattus_norvegicus
ENSEBUG00000006548	prpf8	99	93.729	ENSRBIG00000031219	PRPF8	100	93.979	Rhinopithecus_bieti
ENSEBUG00000006548	prpf8	99	93.729	ENSRROG00000038014	PRPF8	100	93.979	Rhinopithecus_roxellana
ENSEBUG00000006548	prpf8	98	60.744	YHR165C	PRP8	95	60.787	Saccharomyces_cerevisiae
ENSEBUG00000006548	prpf8	99	93.729	ENSSBOG00000029717	PRPF8	99	93.729	Saimiri_boliviensis_boliviensis
ENSEBUG00000006548	prpf8	99	93.600	ENSSHAG00000006167	PRPF8	99	93.600	Sarcophilus_harrisii
ENSEBUG00000006548	prpf8	99	93.262	ENSSFOG00015013905	prpf8	99	93.262	Scleropages_formosus
ENSEBUG00000006548	prpf8	99	93.487	ENSSMAG00000017736	prpf8	99	93.391	Scophthalmus_maximus
ENSEBUG00000006548	prpf8	99	93.433	ENSSDUG00000003029	prpf8	99	93.433	Seriola_dumerili
ENSEBUG00000006548	prpf8	68	94.305	ENSSLDG00000017096	prpf8	100	94.305	Seriola_lalandi_dorsalis
ENSEBUG00000006548	prpf8	87	90.826	ENSSARG00000002892	PRPF8	87	90.826	Sorex_araneus
ENSEBUG00000006548	prpf8	99	93.514	ENSSPUG00000007463	PRPF8	99	93.514	Sphenodon_punctatus
ENSEBUG00000006548	prpf8	99	93.325	ENSSPAG00000015639	prpf8	99	93.325	Stegastes_partitus
ENSEBUG00000006548	prpf8	99	93.729	ENSSSCG00000017817	PRPF8	99	93.729	Sus_scrofa
ENSEBUG00000006548	prpf8	51	92.744	ENSTGUG00000015597	-	95	92.744	Taeniopygia_guttata
ENSEBUG00000006548	prpf8	99	93.763	ENSTGUG00000005648	-	99	93.763	Taeniopygia_guttata
ENSEBUG00000006548	prpf8	99	93.476	ENSTRUG00000015906	prpf8	99	93.476	Takifugu_rubripes
ENSEBUG00000006548	prpf8	94	94.265	ENSTNIG00000003460	prpf8	99	94.265	Tetraodon_nigroviridis
ENSEBUG00000006548	prpf8	88	94.554	ENSTBEG00000006431	PRPF8	89	94.554	Tupaia_belangeri
ENSEBUG00000006548	prpf8	99	93.170	ENSTTRG00000006869	PRPF8	99	93.834	Tursiops_truncatus
ENSEBUG00000006548	prpf8	53	90.895	ENSUAMG00000015644	-	94	91.579	Ursus_americanus
ENSEBUG00000006548	prpf8	99	93.471	ENSUMAG00000009385	PRPF8	99	93.471	Ursus_maritimus
ENSEBUG00000006548	prpf8	67	97.241	ENSVPAG00000006063	-	67	97.241	Vicugna_pacos
ENSEBUG00000006548	prpf8	99	93.729	ENSVVUG00000021695	PRPF8	99	93.729	Vulpes_vulpes
ENSEBUG00000006548	prpf8	99	93.777	ENSXETG00000022259	prpf8	99	93.777	Xenopus_tropicalis
ENSEBUG00000006548	prpf8	99	93.188	ENSXCOG00000012775	prpf8	99	93.188	Xiphophorus_couchianus
ENSEBUG00000006548	prpf8	99	93.145	ENSXMAG00000008505	prpf8	99	93.145	Xiphophorus_maculatus