EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000006555 (Gene tree)
Gene ID: -
Gene Symbol: rrp12
Alias: im:7142677|im:7149218|zgc:111822
Full Name: ribosomal RNA processing 12 homolog
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 176264 bases
Position: chrFYBX02010568.1:2705437-2881700
Accession: ZDB-GENE-050706-182
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000010256	NUC173	PF08161.12	9e-45	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000010800	-	3039	-	ENSEBUP00000010256	1012 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000006555's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000006555's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000006555	rrp12	98	69.388	ENSG00000052749	RRP12	88	67.857	Homo_sapiens
ENSEBUG00000006555	rrp12	98	74.359	ENSAPOG00000013355	rrp12	88	71.186	Acanthochromis_polyacanthus
ENSEBUG00000006555	rrp12	97	68.085	ENSAMEG00000000134	RRP12	87	61.333	Ailuropoda_melanoleuca
ENSEBUG00000006555	rrp12	98	71.795	ENSACIG00000022673	rrp12	90	53.750	Amphilophus_citrinellus
ENSEBUG00000006555	rrp12	98	74.359	ENSAOCG00000016149	rrp12	90	53.750	Amphiprion_ocellaris
ENSEBUG00000006555	rrp12	98	74.359	ENSAPEG00000016023	rrp12	91	51.042	Amphiprion_percula
ENSEBUG00000006555	rrp12	96	74.359	ENSATEG00000022627	rrp12	88	68.750	Anabas_testudineus
ENSEBUG00000006555	rrp12	95	63.830	ENSAPLG00000014387	RRP12	86	64.407	Anas_platyrhynchos
ENSEBUG00000006555	rrp12	98	69.565	ENSACAG00000002175	RRP12	88	56.757	Anolis_carolinensis
ENSEBUG00000006555	rrp12	99	60.274	ENSANAG00000037485	RRP12	91	60.274	Aotus_nancymaae
ENSEBUG00000006555	rrp12	97	59.701	ENSACLG00000007354	rrp12	86	58.667	Astatotilapia_calliptera
ENSEBUG00000006555	rrp12	98	70.213	ENSAMXG00000012852	rrp12	87	69.492	Astyanax_mexicanus
ENSEBUG00000006555	rrp12	99	65.957	ENSBTAG00000002191	RRP12	88	57.333	Bos_taurus
ENSEBUG00000006555	rrp12	82	58.904	ENSCJAG00000016549	-	84	58.904	Callithrix_jacchus
ENSEBUG00000006555	rrp12	99	67.347	ENSCAFG00000009043	RRP12	88	61.333	Canis_familiaris
ENSEBUG00000006555	rrp12	99	67.347	ENSCAFG00020005991	RRP12	88	61.333	Canis_lupus_dingo
ENSEBUG00000006555	rrp12	94	45.882	ENSCHIG00000011876	RRP12	83	50.000	Capra_hircus
ENSEBUG00000006555	rrp12	93	68.750	ENSCAPG00000008991	RRP12	86	57.895	Cavia_aperea
ENSEBUG00000006555	rrp12	98	68.750	ENSCPOG00000004215	RRP12	84	59.211	Cavia_porcellus
ENSEBUG00000006555	rrp12	76	60.274	ENSCCAG00000024088	RRP12	79	60.274	Cebus_capucinus
ENSEBUG00000006555	rrp12	61	60.274	ENSCCAG00000033123	-	61	60.274	Cebus_capucinus
ENSEBUG00000006555	rrp12	99	69.388	ENSCATG00000045310	RRP12	89	62.667	Cercocebus_atys
ENSEBUG00000006555	rrp12	99	65.957	ENSCLAG00000003753	RRP12	88	57.333	Chinchilla_lanigera
ENSEBUG00000006555	rrp12	80	69.388	ENSCSAG00000005877	RRP12	75	62.667	Chlorocebus_sabaeus
ENSEBUG00000006555	rrp12	60	65.957	ENSCHOG00000003095	-	51	67.797	Choloepus_hoffmanni
ENSEBUG00000006555	rrp12	92	61.250	ENSCPBG00000011935	RRP12	80	61.250	Chrysemys_picta_bellii
ENSEBUG00000006555	rrp12	54	59.322	ENSCSAVG00000006059	-	73	59.322	Ciona_savignyi
ENSEBUG00000006555	rrp12	99	67.347	ENSCANG00000031653	RRP12	83	61.333	Colobus_angolensis_palliatus
ENSEBUG00000006555	rrp12	87	68.889	ENSCGRG00001004338	Rrp12	81	61.644	Cricetulus_griseus_chok1gshd
ENSEBUG00000006555	rrp12	98	68.889	ENSCGRG00000011965	Rrp12	83	61.644	Cricetulus_griseus_crigri
ENSEBUG00000006555	rrp12	99	54.667	ENSCSEG00000007799	rrp12	90	54.667	Cynoglossus_semilaevis
ENSEBUG00000006555	rrp12	97	50.633	ENSCVAG00000003418	rrp12	92	50.633	Cyprinodon_variegatus
ENSEBUG00000006555	rrp12	99	43.038	ENSDARG00000022410	rrp12	89	66.102	Danio_rerio
ENSEBUG00000006555	rrp12	97	56.522	ENSDNOG00000005120	RRP12	83	57.895	Dasypus_novemcinctus
ENSEBUG00000006555	rrp12	98	71.111	ENSDORG00000009199	Rrp12	83	60.274	Dipodomys_ordii
ENSEBUG00000006555	rrp12	80	58.537	ENSETEG00000002455	RRP12	73	55.556	Echinops_telfairi
ENSEBUG00000006555	rrp12	96	68.085	ENSEASG00005008693	RRP12	84	61.644	Equus_asinus_asinus
ENSEBUG00000006555	rrp12	90	65.957	ENSECAG00000010892	RRP12	83	60.000	Equus_caballus
ENSEBUG00000006555	rrp12	99	66.667	ENSELUG00000010510	rrp12	86	66.667	Esox_lucius
ENSEBUG00000006555	rrp12	98	68.085	ENSFCAG00000028639	RRP12	85	60.000	Felis_catus
ENSEBUG00000006555	rrp12	92	66.667	ENSFALG00000008458	RRP12	87	55.556	Ficedula_albicollis
ENSEBUG00000006555	rrp12	98	66.000	ENSFDAG00000019108	RRP12	80	58.667	Fukomys_damarensis
ENSEBUG00000006555	rrp12	98	69.231	ENSFHEG00000004148	rrp12	88	57.333	Fundulus_heteroclitus
ENSEBUG00000006555	rrp12	91	53.571	ENSGMOG00000004188	rrp12	73	55.357	Gadus_morhua
ENSEBUG00000006555	rrp12	98	66.667	ENSGALG00000041331	RRP12	84	66.667	Gallus_gallus
ENSEBUG00000006555	rrp12	96	69.231	ENSGAFG00000009038	rrp12	90	50.633	Gambusia_affinis
ENSEBUG00000006555	rrp12	97	50.617	ENSGACG00000007175	rrp12	86	67.188	Gasterosteus_aculeatus
ENSEBUG00000006555	rrp12	74	47.596	ENSGAGG00000019169	RRP12	89	48.284	Gopherus_agassizii
ENSEBUG00000006555	rrp12	98	69.388	ENSGGOG00000014850	RRP12	83	62.667	Gorilla_gorilla
ENSEBUG00000006555	rrp12	98	74.359	ENSHBUG00000023527	rrp12	90	55.000	Haplochromis_burtoni
ENSEBUG00000006555	rrp12	99	68.085	ENSHGLG00000016772	RRP12	88	57.333	Heterocephalus_glaber_female
ENSEBUG00000006555	rrp12	99	68.085	ENSHGLG00100015110	RRP12	88	57.333	Heterocephalus_glaber_male
ENSEBUG00000006555	rrp12	99	67.797	ENSHCOG00000019519	rrp12	85	67.797	Hippocampus_comes
ENSEBUG00000006555	rrp12	99	47.000	ENSIPUG00000000311	RRP12	93	46.835	Ictalurus_punctatus
ENSEBUG00000006555	rrp12	98	66.000	ENSSTOG00000006515	RRP12	83	60.000	Ictidomys_tridecemlineatus
ENSEBUG00000006555	rrp12	92	56.000	ENSJJAG00000000110	Rrp12	82	56.000	Jaculus_jaculus
ENSEBUG00000006555	rrp12	97	71.053	ENSKMAG00000020621	rrp12	89	53.571	Kryptolebias_marmoratus
ENSEBUG00000006555	rrp12	99	58.667	ENSLBEG00000015335	rrp12	86	67.188	Labrus_bergylta
ENSEBUG00000006555	rrp12	71	44.944	ENSLACG00000016633	RRP12	56	58.333	Latimeria_chalumnae
ENSEBUG00000006555	rrp12	90	48.522	ENSLOCG00000003846	rrp12	89	60.526	Lepisosteus_oculatus
ENSEBUG00000006555	rrp12	99	47.952	ENSLAFG00000015965	RRP12	83	56.410	Loxodonta_africana
ENSEBUG00000006555	rrp12	99	69.388	ENSMFAG00000041558	RRP12	88	62.667	Macaca_fascicularis
ENSEBUG00000006555	rrp12	99	69.388	ENSMMUG00000019634	RRP12	88	62.667	Macaca_mulatta
ENSEBUG00000006555	rrp12	99	69.388	ENSMNEG00000036759	RRP12	89	62.667	Macaca_nemestrina
ENSEBUG00000006555	rrp12	99	69.388	ENSMLEG00000041317	RRP12	88	62.667	Mandrillus_leucophaeus
ENSEBUG00000006555	rrp12	97	49.268	ENSMAMG00000002964	rrp12	89	61.333	Mastacembelus_armatus
ENSEBUG00000006555	rrp12	96	74.359	ENSMZEG00005003241	rrp12	85	55.000	Maylandia_zebra
ENSEBUG00000006555	rrp12	94	65.957	ENSMGAG00000009829	RRP12	83	66.102	Meleagris_gallopavo
ENSEBUG00000006555	rrp12	99	47.711	ENSMAUG00000020743	Rrp12	88	47.711	Mesocricetus_auratus
ENSEBUG00000006555	rrp12	99	61.644	ENSMICG00000007624	RRP12	84	61.644	Microcebus_murinus
ENSEBUG00000006555	rrp12	98	68.085	ENSMOCG00000006753	Rrp12	83	60.000	Microtus_ochrogaster
ENSEBUG00000006555	rrp12	99	65.517	ENSMMOG00000010708	rrp12	89	65.517	Mola_mola
ENSEBUG00000006555	rrp12	99	49.157	ENSMODG00000004315	RRP12	83	63.291	Monodelphis_domestica
ENSEBUG00000006555	rrp12	98	48.120	ENSMALG00000016560	rrp12	90	55.000	Monopterus_albus
ENSEBUG00000006555	rrp12	98	63.830	MGP_CAROLIEiJ_G0022957	Rrp12	82	57.333	Mus_caroli
ENSEBUG00000006555	rrp12	98	63.830	ENSMUSG00000035049	Rrp12	87	57.333	Mus_musculus
ENSEBUG00000006555	rrp12	98	63.830	MGP_PahariEiJ_G0014447	Rrp12	83	57.333	Mus_pahari
ENSEBUG00000006555	rrp12	98	63.830	MGP_SPRETEiJ_G0023878	Rrp12	87	57.333	Mus_spretus
ENSEBUG00000006555	rrp12	98	68.085	ENSMPUG00000017046	RRP12	88	60.000	Mustela_putorius_furo
ENSEBUG00000006555	rrp12	99	68.085	ENSMLUG00000017160	RRP12	83	61.333	Myotis_lucifugus
ENSEBUG00000006555	rrp12	98	71.111	ENSNGAG00000024144	Rrp12	83	60.274	Nannospalax_galili
ENSEBUG00000006555	rrp12	98	74.359	ENSNBRG00000009987	rrp12	84	51.042	Neolamprologus_brichardi
ENSEBUG00000006555	rrp12	99	70.213	ENSNLEG00000013762	RRP12	87	63.014	Nomascus_leucogenys
ENSEBUG00000006555	rrp12	92	71.429	ENSMEUG00000003185	RRP12	75	71.429	Notamacropus_eugenii
ENSEBUG00000006555	rrp12	91	70.213	ENSOPRG00000005001	RRP12	78	60.811	Ochotona_princeps
ENSEBUG00000006555	rrp12	99	70.213	ENSODEG00000016439	RRP12	87	58.667	Octodon_degus
ENSEBUG00000006555	rrp12	96	74.359	ENSONIG00000009528	rrp12	90	55.000	Oreochromis_niloticus
ENSEBUG00000006555	rrp12	97	73.438	ENSOANG00000006560	RRP12	81	73.438	Ornithorhynchus_anatinus
ENSEBUG00000006555	rrp12	98	64.444	ENSOCUG00000005662	RRP12	84	54.795	Oryctolagus_cuniculus
ENSEBUG00000006555	rrp12	98	69.231	ENSORLG00000008688	rrp12	86	51.250	Oryzias_latipes
ENSEBUG00000006555	rrp12	95	48.936	ENSORLG00020002355	rrp12	86	55.000	Oryzias_latipes_hni
ENSEBUG00000006555	rrp12	98	69.231	ENSORLG00015006709	rrp12	86	53.750	Oryzias_latipes_hsok
ENSEBUG00000006555	rrp12	93	53.086	ENSOMEG00000002609	rrp12	89	53.750	Oryzias_melastigma
ENSEBUG00000006555	rrp12	99	63.934	ENSOGAG00000001626	RRP12	83	63.934	Otolemur_garnettii
ENSEBUG00000006555	rrp12	99	65.957	ENSOARG00000009681	RRP12	88	57.333	Ovis_aries
ENSEBUG00000006555	rrp12	99	70.213	ENSPPAG00000043885	RRP12	88	61.333	Pan_paniscus
ENSEBUG00000006555	rrp12	98	68.889	ENSPPRG00000002029	RRP12	85	60.274	Panthera_pardus
ENSEBUG00000006555	rrp12	99	68.889	ENSPTIG00000004428	RRP12	84	60.274	Panthera_tigris_altaica
ENSEBUG00000006555	rrp12	99	70.213	ENSPTRG00000002806	RRP12	88	61.333	Pan_troglodytes
ENSEBUG00000006555	rrp12	99	69.388	ENSPANG00000021360	RRP12	88	62.667	Papio_anubis
ENSEBUG00000006555	rrp12	99	56.000	ENSPKIG00000016516	rrp12	90	56.000	Paramormyrops_kingsleyae
ENSEBUG00000006555	rrp12	98	46.753	ENSPMGG00000020217	rrp12	89	56.757	Periophthalmus_magnuspinnatus
ENSEBUG00000006555	rrp12	98	65.217	ENSPEMG00000008437	Rrp12	83	56.757	Peromyscus_maniculatus_bairdii
ENSEBUG00000006555	rrp12	85	67.797	ENSPMAG00000007493	rrp12	75	67.797	Petromyzon_marinus
ENSEBUG00000006555	rrp12	99	67.188	ENSPCIG00000002157	RRP12	83	67.188	Phascolarctos_cinereus
ENSEBUG00000006555	rrp12	97	71.795	ENSPFOG00000014975	rrp12	88	60.000	Poecilia_formosa
ENSEBUG00000006555	rrp12	98	71.795	ENSPLAG00000009840	rrp12	88	60.000	Poecilia_latipinna
ENSEBUG00000006555	rrp12	99	71.795	ENSPMEG00000021871	rrp12	91	60.000	Poecilia_mexicana
ENSEBUG00000006555	rrp12	98	71.795	ENSPREG00000020950	rrp12	86	60.000	Poecilia_reticulata
ENSEBUG00000006555	rrp12	99	69.388	ENSPPYG00000002528	RRP12	88	62.667	Pongo_abelii
ENSEBUG00000006555	rrp12	90	68.421	ENSPCAG00000008967	RRP12	79	68.421	Procavia_capensis
ENSEBUG00000006555	rrp12	99	60.000	ENSPCOG00000014009	RRP12	84	60.000	Propithecus_coquereli
ENSEBUG00000006555	rrp12	99	68.085	ENSPVAG00000003370	RRP12	88	60.000	Pteropus_vampyrus
ENSEBUG00000006555	rrp12	97	74.359	ENSPNYG00000009451	rrp12	86	60.000	Pundamilia_nyererei
ENSEBUG00000006555	rrp12	98	70.213	ENSPNAG00000007658	rrp12	91	68.750	Pygocentrus_nattereri
ENSEBUG00000006555	rrp12	99	47.711	ENSRNOG00000048495	Rrp12	83	57.895	Rattus_norvegicus
ENSEBUG00000006555	rrp12	98	71.429	ENSRBIG00000021296	RRP12	83	64.000	Rhinopithecus_bieti
ENSEBUG00000006555	rrp12	99	69.388	ENSRROG00000032482	RRP12	84	62.667	Rhinopithecus_roxellana
ENSEBUG00000006555	rrp12	99	57.534	ENSSBOG00000030992	RRP12	92	57.534	Saimiri_boliviensis_boliviensis
ENSEBUG00000006555	rrp12	99	57.143	ENSSHAG00000018275	RRP12	86	71.429	Sarcophilus_harrisii
ENSEBUG00000006555	rrp12	99	68.085	ENSSFOG00015016400	rrp12	86	60.000	Scleropages_formosus
ENSEBUG00000006555	rrp12	98	74.359	ENSSMAG00000004047	rrp12	82	61.333	Scophthalmus_maximus
ENSEBUG00000006555	rrp12	99	48.558	ENSSDUG00000022871	rrp12	84	60.000	Seriola_dumerili
ENSEBUG00000006555	rrp12	99	61.194	ENSSLDG00000003038	rrp12	87	53.165	Seriola_lalandi_dorsalis
ENSEBUG00000006555	rrp12	99	56.164	ENSSPUG00000012221	RRP12	88	56.164	Sphenodon_punctatus
ENSEBUG00000006555	rrp12	96	74.359	ENSSPAG00000002261	rrp12	91	56.250	Stegastes_partitus
ENSEBUG00000006555	rrp12	99	68.085	ENSSSCG00000010514	RRP12	84	60.000	Sus_scrofa
ENSEBUG00000006555	rrp12	80	66.667	ENSTGUG00000009711	RRP12	79	66.667	Taeniopygia_guttata
ENSEBUG00000006555	rrp12	99	48.052	ENSTRUG00000012017	rrp12	84	50.909	Takifugu_rubripes
ENSEBUG00000006555	rrp12	99	63.830	ENSTNIG00000016522	rrp12	89	54.667	Tetraodon_nigroviridis
ENSEBUG00000006555	rrp12	78	62.121	ENSTBEG00000004907	RRP12	70	62.121	Tupaia_belangeri
ENSEBUG00000006555	rrp12	98	68.889	ENSTTRG00000009878	RRP12	79	60.274	Tursiops_truncatus
ENSEBUG00000006555	rrp12	98	68.085	ENSUAMG00000009092	RRP12	87	67.213	Ursus_americanus
ENSEBUG00000006555	rrp12	98	68.085	ENSUMAG00000021621	RRP12	87	67.213	Ursus_maritimus
ENSEBUG00000006555	rrp12	98	71.795	ENSVVUG00000023168	RRP12	88	64.615	Vulpes_vulpes
ENSEBUG00000006555	rrp12	100	53.448	ENSXETG00000003430	rrp12	84	76.271	Xenopus_tropicalis
ENSEBUG00000006555	rrp12	95	50.000	ENSXCOG00000012082	rrp12	92	50.413	Xiphophorus_couchianus
ENSEBUG00000006555	rrp12	96	68.421	ENSXMAG00000013498	rrp12	90	50.633	Xiphophorus_maculatus