EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000006709 (Gene tree)
Gene ID: -
Gene Symbol: zic1 (1 of many)
Alias: ZIC|ZNF201
Full Name: zic family member 1 (odd-paired homolog%2C Drosophila)
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 4878 bases
Position: chrFYBX02010267.1:1767631-1772508
Accession: ZDB-GENE-000208-4
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000010428	zf-C2H2	PF00096.26	1.8e-21	1	4
ENSEBUP00000010428	zf-C2H2	PF00096.26	1.8e-21	2	4
ENSEBUP00000010428	zf-C2H2	PF00096.26	1.8e-21	3	4
ENSEBUP00000010428	zf-C2H2	PF00096.26	1.8e-21	4	4
ENSEBUP00000010428	zf-met	PF12874.7	3.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000010975	-	1389	-	ENSEBUP00000010428	462 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000006709's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000006709's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000006709	zic1	100	100.000	ENSEBUG00000002180	zic1	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000006709	zic1	100	56.735	ENSG00000152977	ZIC1	100	55.670	Homo_sapiens
ENSEBUG00000006709	zic1	80	59.733	ENSACIG00000018732	zic1	93	58.445	Amphilophus_citrinellus
ENSEBUG00000006709	zic1	65	66.118	ENSFDAG00000013872	ZIC1	100	64.590	Fukomys_damarensis
ENSEBUG00000006709	zic1	100	57.377	ENSKMAG00000011689	zic1	98	59.474	Kryptolebias_marmoratus
ENSEBUG00000006709	zic1	90	57.381	ENSORLG00020012199	zic1	94	57.035	Oryzias_latipes_hni
ENSEBUG00000006709	zic1	70	72.680	ENSSHAG00000015025	ZIC1	98	73.057	Sarcophilus_harrisii