EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000006783 (Gene tree)
Gene ID: -
Gene Symbol: polr3f
Alias: zgc:56299|zgc:76983
Full Name: polymerase (RNA) III (DNA directed) polypeptide F
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 32611 bases
Position: chrFYBX02000162.1:1064667-1097277
Accession: ZDB-GENE-040426-972
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000010556	RNA_pol_Rpc34	PF05158.12	1.3e-94	1	1
ENSEBUP00000010583	RNA_pol_Rpc34	PF05158.12	1.3e-94	1	1
ENSEBUP00000010536	RNA_pol_Rpc34	PF05158.12	1.1e-93	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000011105	-	4393	-	ENSEBUP00000010556	311 (aa)	-	-
ENSEBUT00000011085	-	4709	-	ENSEBUP00000010536	339 (aa)	-	-
ENSEBUT00000011133	-	4277	-	ENSEBUP00000010583	311 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000006783's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000006783's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000006783	polr3f	97	77.228	ENSG00000132664	POLR3F	96	77.228	Homo_sapiens
ENSEBUG00000006783	polr3f	100	74.367	ENSAPOG00000008271	polr3f	100	74.367	Acanthochromis_polyacanthus
ENSEBUG00000006783	polr3f	97	77.228	ENSAMEG00000005222	POLR3F	96	77.228	Ailuropoda_melanoleuca
ENSEBUG00000006783	polr3f	100	72.026	ENSACIG00000006705	polr3f	100	72.026	Amphilophus_citrinellus
ENSEBUG00000006783	polr3f	100	75.000	ENSAOCG00000000687	polr3f	100	75.000	Amphiprion_ocellaris
ENSEBUG00000006783	polr3f	100	75.000	ENSAPEG00000015263	polr3f	100	75.000	Amphiprion_percula
ENSEBUG00000006783	polr3f	88	78.909	ENSATEG00000015539	polr3f	100	78.909	Anabas_testudineus
ENSEBUG00000006783	polr3f	88	80.000	ENSAPLG00000005533	POLR3F	100	80.000	Anas_platyrhynchos
ENSEBUG00000006783	polr3f	97	76.238	ENSACAG00000014293	POLR3F	98	76.238	Anolis_carolinensis
ENSEBUG00000006783	polr3f	97	77.228	ENSANAG00000026726	POLR3F	96	77.228	Aotus_nancymaae
ENSEBUG00000006783	polr3f	100	74.684	ENSACLG00000003615	polr3f	100	74.684	Astatotilapia_calliptera
ENSEBUG00000006783	polr3f	100	76.433	ENSAMXG00000036020	polr3f	100	76.433	Astyanax_mexicanus
ENSEBUG00000006783	polr3f	97	77.228	ENSBTAG00000008825	POLR3F	96	77.228	Bos_taurus
ENSEBUG00000006783	polr3f	98	33.657	WBGene00021112	W09C3.4	98	33.657	Caenorhabditis_elegans
ENSEBUG00000006783	polr3f	97	77.228	ENSCJAG00000005159	POLR3F	96	77.228	Callithrix_jacchus
ENSEBUG00000006783	polr3f	97	76.898	ENSCAFG00000005420	POLR3F	97	76.299	Canis_familiaris
ENSEBUG00000006783	polr3f	97	76.898	ENSCAFG00020027500	POLR3F	97	76.299	Canis_lupus_dingo
ENSEBUG00000006783	polr3f	97	77.228	ENSCHIG00000014743	POLR3F	96	77.228	Capra_hircus
ENSEBUG00000006783	polr3f	97	77.228	ENSTSYG00000004207	POLR3F	96	77.228	Carlito_syrichta
ENSEBUG00000006783	polr3f	83	66.013	ENSCAPG00000008423	POLR3F	100	66.013	Cavia_aperea
ENSEBUG00000006783	polr3f	96	78.333	ENSCPOG00000002400	POLR3F	95	78.333	Cavia_porcellus
ENSEBUG00000006783	polr3f	97	67.987	ENSCCAG00000021800	POLR3F	97	67.208	Cebus_capucinus
ENSEBUG00000006783	polr3f	97	77.228	ENSCATG00000019507	POLR3F	96	77.228	Cercocebus_atys
ENSEBUG00000006783	polr3f	96	78.000	ENSCLAG00000016296	POLR3F	95	78.000	Chinchilla_lanigera
ENSEBUG00000006783	polr3f	97	77.228	ENSCSAG00000011513	POLR3F	96	77.228	Chlorocebus_sabaeus
ENSEBUG00000006783	polr3f	70	76.404	ENSCHOG00000013268	POLR3F	71	76.404	Choloepus_hoffmanni
ENSEBUG00000006783	polr3f	88	77.455	ENSCPBG00000023473	POLR3F	100	77.455	Chrysemys_picta_bellii
ENSEBUG00000006783	polr3f	99	60.064	ENSCING00000001212	-	99	60.064	Ciona_intestinalis
ENSEBUG00000006783	polr3f	70	60.633	ENSCSAVG00000003340	-	96	64.497	Ciona_savignyi
ENSEBUG00000006783	polr3f	89	79.137	ENSCANG00000037390	POLR3F	96	79.137	Colobus_angolensis_palliatus
ENSEBUG00000006783	polr3f	97	77.558	ENSCGRG00001002032	Polr3f	96	77.558	Cricetulus_griseus_chok1gshd
ENSEBUG00000006783	polr3f	97	77.558	ENSCGRG00000010852	Polr3f	96	77.558	Cricetulus_griseus_crigri
ENSEBUG00000006783	polr3f	97	76.238	ENSCSEG00000001247	polr3f	96	76.238	Cynoglossus_semilaevis
ENSEBUG00000006783	polr3f	100	76.582	ENSCVAG00000007611	polr3f	100	76.582	Cyprinodon_variegatus
ENSEBUG00000006783	polr3f	100	77.070	ENSDARG00000012572	polr3f	100	77.070	Danio_rerio
ENSEBUG00000006783	polr3f	97	75.578	ENSDNOG00000010719	POLR3F	96	75.578	Dasypus_novemcinctus
ENSEBUG00000006783	polr3f	97	77.888	ENSDORG00000016352	Polr3f	96	77.888	Dipodomys_ordii
ENSEBUG00000006783	polr3f	97	48.675	FBgn0038951	CG5380	99	48.675	Drosophila_melanogaster
ENSEBUG00000006783	polr3f	89	47.312	ENSETEG00000015485	-	99	47.312	Echinops_telfairi
ENSEBUG00000006783	polr3f	97	77.228	ENSEASG00005002022	POLR3F	96	77.228	Equus_asinus_asinus
ENSEBUG00000006783	polr3f	97	77.228	ENSECAG00000009920	POLR3F	96	77.228	Equus_caballus
ENSEBUG00000006783	polr3f	69	60.748	ENSEEUG00000000184	POLR3F	69	59.817	Erinaceus_europaeus
ENSEBUG00000006783	polr3f	100	77.389	ENSELUG00000001558	polr3f	100	77.389	Esox_lucius
ENSEBUG00000006783	polr3f	97	77.228	ENSFCAG00000013828	POLR3F	96	77.228	Felis_catus
ENSEBUG00000006783	polr3f	88	80.000	ENSFALG00000007623	POLR3F	100	80.000	Ficedula_albicollis
ENSEBUG00000006783	polr3f	96	77.667	ENSFDAG00000002528	POLR3F	95	77.667	Fukomys_damarensis
ENSEBUG00000006783	polr3f	100	74.367	ENSFHEG00000006450	polr3f	100	74.367	Fundulus_heteroclitus
ENSEBUG00000006783	polr3f	100	76.752	ENSGALG00000008749	POLR3F	100	76.752	Gallus_gallus
ENSEBUG00000006783	polr3f	100	75.949	ENSGAFG00000003698	polr3f	100	75.949	Gambusia_affinis
ENSEBUG00000006783	polr3f	100	74.841	ENSGAGG00000006151	POLR3F	100	74.841	Gopherus_agassizii
ENSEBUG00000006783	polr3f	97	77.228	ENSGGOG00000011543	POLR3F	96	77.228	Gorilla_gorilla
ENSEBUG00000006783	polr3f	100	74.684	ENSHBUG00000013806	polr3f	100	74.684	Haplochromis_burtoni
ENSEBUG00000006783	polr3f	96	78.000	ENSHGLG00000011867	POLR3F	95	78.000	Heterocephalus_glaber_female
ENSEBUG00000006783	polr3f	96	78.000	ENSHGLG00100012577	POLR3F	95	78.000	Heterocephalus_glaber_male
ENSEBUG00000006783	polr3f	100	72.468	ENSHCOG00000011751	polr3f	100	72.468	Hippocampus_comes
ENSEBUG00000006783	polr3f	100	76.433	ENSIPUG00000013347	polr3f	100	76.433	Ictalurus_punctatus
ENSEBUG00000006783	polr3f	97	77.228	ENSSTOG00000013588	POLR3F	96	77.228	Ictidomys_tridecemlineatus
ENSEBUG00000006783	polr3f	97	77.558	ENSJJAG00000017513	Polr3f	96	77.558	Jaculus_jaculus
ENSEBUG00000006783	polr3f	88	74.182	ENSKMAG00000016495	polr3f	100	74.182	Kryptolebias_marmoratus
ENSEBUG00000006783	polr3f	75	80.603	ENSLBEG00000011998	polr3f	100	80.603	Labrus_bergylta
ENSEBUG00000006783	polr3f	100	76.433	ENSLACG00000009371	POLR3F	100	76.433	Latimeria_chalumnae
ENSEBUG00000006783	polr3f	100	78.025	ENSLOCG00000015701	polr3f	100	78.025	Lepisosteus_oculatus
ENSEBUG00000006783	polr3f	97	76.898	ENSLAFG00000004929	POLR3F	96	76.898	Loxodonta_africana
ENSEBUG00000006783	polr3f	97	77.228	ENSMFAG00000002227	POLR3F	96	77.228	Macaca_fascicularis
ENSEBUG00000006783	polr3f	88	78.909	ENSMMUG00000004143	POLR3F	100	78.909	Macaca_mulatta
ENSEBUG00000006783	polr3f	97	77.228	ENSMNEG00000033404	POLR3F	96	77.228	Macaca_nemestrina
ENSEBUG00000006783	polr3f	97	77.228	ENSMLEG00000021905	POLR3F	96	77.228	Mandrillus_leucophaeus
ENSEBUG00000006783	polr3f	100	77.215	ENSMAMG00000017975	polr3f	100	77.215	Mastacembelus_armatus
ENSEBUG00000006783	polr3f	100	74.684	ENSMZEG00005015134	polr3f	100	74.684	Maylandia_zebra
ENSEBUG00000006783	polr3f	100	77.389	ENSMGAG00000006691	POLR3F	100	77.389	Meleagris_gallopavo
ENSEBUG00000006783	polr3f	97	77.228	ENSMAUG00000020176	Polr3f	96	77.228	Mesocricetus_auratus
ENSEBUG00000006783	polr3f	97	77.228	ENSMICG00000044519	POLR3F	96	77.228	Microcebus_murinus
ENSEBUG00000006783	polr3f	97	77.558	ENSMOCG00000018352	Polr3f	96	77.558	Microtus_ochrogaster
ENSEBUG00000006783	polr3f	94	78.983	ENSMMOG00000018477	polr3f	99	78.983	Mola_mola
ENSEBUG00000006783	polr3f	97	77.228	ENSMODG00000005624	POLR3F	96	77.228	Monodelphis_domestica
ENSEBUG00000006783	polr3f	100	76.266	ENSMALG00000006685	polr3f	100	76.266	Monopterus_albus
ENSEBUG00000006783	polr3f	97	77.228	MGP_CAROLIEiJ_G0024385	Polr3f	96	77.228	Mus_caroli
ENSEBUG00000006783	polr3f	97	77.228	ENSMUSG00000027427	Polr3f	96	77.228	Mus_musculus
ENSEBUG00000006783	polr3f	97	77.228	MGP_PahariEiJ_G0025829	Polr3f	96	77.228	Mus_pahari
ENSEBUG00000006783	polr3f	97	77.228	MGP_SPRETEiJ_G0025304	Polr3f	96	77.228	Mus_spretus
ENSEBUG00000006783	polr3f	100	56.923	ENSMPUG00000001252	-	100	56.923	Mustela_putorius_furo
ENSEBUG00000006783	polr3f	97	77.228	ENSMLUG00000014844	POLR3F	96	77.228	Myotis_lucifugus
ENSEBUG00000006783	polr3f	97	77.228	ENSNGAG00000010898	Polr3f	96	77.228	Nannospalax_galili
ENSEBUG00000006783	polr3f	100	75.000	ENSNBRG00000020796	polr3f	100	75.000	Neolamprologus_brichardi
ENSEBUG00000006783	polr3f	97	77.228	ENSNLEG00000009778	POLR3F	96	77.228	Nomascus_leucogenys
ENSEBUG00000006783	polr3f	95	72.542	ENSMEUG00000010320	POLR3F	100	72.542	Notamacropus_eugenii
ENSEBUG00000006783	polr3f	97	77.558	ENSOPRG00000003385	POLR3F	96	77.558	Ochotona_princeps
ENSEBUG00000006783	polr3f	96	78.333	ENSODEG00000011521	POLR3F	95	78.333	Octodon_degus
ENSEBUG00000006783	polr3f	100	75.316	ENSONIG00000006858	polr3f	100	75.316	Oreochromis_niloticus
ENSEBUG00000006783	polr3f	97	77.228	ENSOANG00000001253	POLR3F	96	77.228	Ornithorhynchus_anatinus
ENSEBUG00000006783	polr3f	97	77.228	ENSOCUG00000015067	POLR3F	96	77.228	Oryctolagus_cuniculus
ENSEBUG00000006783	polr3f	100	76.582	ENSORLG00000022412	polr3f	100	76.582	Oryzias_latipes
ENSEBUG00000006783	polr3f	100	76.582	ENSORLG00020021944	polr3f	100	76.582	Oryzias_latipes_hni
ENSEBUG00000006783	polr3f	97	76.898	ENSOGAG00000002916	POLR3F	96	76.898	Otolemur_garnettii
ENSEBUG00000006783	polr3f	97	46.865	ENSOARG00000008647	-	95	46.865	Ovis_aries
ENSEBUG00000006783	polr3f	97	77.228	ENSOARG00000000315	-	96	77.228	Ovis_aries
ENSEBUG00000006783	polr3f	97	77.228	ENSPPAG00000036681	POLR3F	96	77.228	Pan_paniscus
ENSEBUG00000006783	polr3f	97	77.228	ENSPPRG00000024604	POLR3F	96	77.228	Panthera_pardus
ENSEBUG00000006783	polr3f	97	77.228	ENSPTIG00000020292	POLR3F	96	77.228	Panthera_tigris_altaica
ENSEBUG00000006783	polr3f	97	77.228	ENSPTRG00000013287	POLR3F	96	77.228	Pan_troglodytes
ENSEBUG00000006783	polr3f	97	77.228	ENSPANG00000025015	POLR3F	96	77.228	Papio_anubis
ENSEBUG00000006783	polr3f	100	75.478	ENSPKIG00000004427	polr3f	100	75.478	Paramormyrops_kingsleyae
ENSEBUG00000006783	polr3f	88	78.909	ENSPSIG00000016613	POLR3F	100	78.909	Pelodiscus_sinensis
ENSEBUG00000006783	polr3f	100	47.785	ENSPMGG00000018350	polr3f	100	51.899	Periophthalmus_magnuspinnatus
ENSEBUG00000006783	polr3f	97	77.228	ENSPEMG00000006966	Polr3f	96	77.228	Peromyscus_maniculatus_bairdii
ENSEBUG00000006783	polr3f	100	78.662	ENSPMAG00000005530	polr3f	100	78.662	Petromyzon_marinus
ENSEBUG00000006783	polr3f	97	77.228	ENSPCIG00000000908	POLR3F	83	75.974	Phascolarctos_cinereus
ENSEBUG00000006783	polr3f	100	75.316	ENSPFOG00000018334	polr3f	100	75.316	Poecilia_formosa
ENSEBUG00000006783	polr3f	100	75.316	ENSPLAG00000021803	polr3f	100	75.316	Poecilia_latipinna
ENSEBUG00000006783	polr3f	100	75.316	ENSPMEG00000013150	polr3f	100	75.316	Poecilia_mexicana
ENSEBUG00000006783	polr3f	100	75.316	ENSPREG00000005278	polr3f	100	75.316	Poecilia_reticulata
ENSEBUG00000006783	polr3f	97	77.228	ENSPPYG00000010737	POLR3F	96	77.228	Pongo_abelii
ENSEBUG00000006783	polr3f	62	83.108	ENSPCAG00000004893	POLR3F	68	83.108	Procavia_capensis
ENSEBUG00000006783	polr3f	97	77.228	ENSPCOG00000004543	POLR3F	96	77.228	Propithecus_coquereli
ENSEBUG00000006783	polr3f	97	76.898	ENSPVAG00000000403	POLR3F	96	76.898	Pteropus_vampyrus
ENSEBUG00000006783	polr3f	100	74.684	ENSPNYG00000016276	polr3f	100	74.684	Pundamilia_nyererei
ENSEBUG00000006783	polr3f	100	77.707	ENSPNAG00000005164	polr3f	100	77.707	Pygocentrus_nattereri
ENSEBUG00000006783	polr3f	97	77.228	ENSRNOG00000007548	Polr3f	91	70.796	Rattus_norvegicus
ENSEBUG00000006783	polr3f	97	77.228	ENSRBIG00000021268	POLR3F	96	77.228	Rhinopithecus_bieti
ENSEBUG00000006783	polr3f	97	77.228	ENSRROG00000039911	POLR3F	96	77.228	Rhinopithecus_roxellana
ENSEBUG00000006783	polr3f	97	77.228	ENSSBOG00000018207	POLR3F	96	77.228	Saimiri_boliviensis_boliviensis
ENSEBUG00000006783	polr3f	72	78.222	ENSSHAG00000018160	POLR3F	74	77.253	Sarcophilus_harrisii
ENSEBUG00000006783	polr3f	100	77.564	ENSSFOG00015022433	polr3f	100	77.564	Scleropages_formosus
ENSEBUG00000006783	polr3f	100	75.000	ENSSMAG00000021029	polr3f	100	75.000	Scophthalmus_maximus
ENSEBUG00000006783	polr3f	100	68.671	ENSSDUG00000022435	polr3f	100	68.671	Seriola_dumerili
ENSEBUG00000006783	polr3f	100	76.266	ENSSLDG00000012761	polr3f	100	76.266	Seriola_lalandi_dorsalis
ENSEBUG00000006783	polr3f	100	68.671	ENSSARG00000006039	POLR3F	100	68.671	Sorex_araneus
ENSEBUG00000006783	polr3f	100	75.796	ENSSPUG00000001873	POLR3F	100	75.796	Sphenodon_punctatus
ENSEBUG00000006783	polr3f	100	68.038	ENSSPAG00000002092	polr3f	100	68.038	Stegastes_partitus
ENSEBUG00000006783	polr3f	97	77.228	ENSSSCG00000007095	POLR3F	100	81.034	Sus_scrofa
ENSEBUG00000006783	polr3f	100	76.752	ENSTGUG00000005839	POLR3F	100	76.752	Taeniopygia_guttata
ENSEBUG00000006783	polr3f	100	75.000	ENSTRUG00000012101	polr3f	100	75.000	Takifugu_rubripes
ENSEBUG00000006783	polr3f	100	75.316	ENSTNIG00000006456	polr3f	100	75.316	Tetraodon_nigroviridis
ENSEBUG00000006783	polr3f	97	62.706	ENSTBEG00000007921	POLR3F	96	62.706	Tupaia_belangeri
ENSEBUG00000006783	polr3f	97	76.898	ENSTTRG00000002580	POLR3F	96	76.898	Tursiops_truncatus
ENSEBUG00000006783	polr3f	53	78.313	ENSUAMG00000024166	POLR3F	100	78.313	Ursus_americanus
ENSEBUG00000006783	polr3f	97	76.898	ENSUMAG00000024944	POLR3F	96	76.898	Ursus_maritimus
ENSEBUG00000006783	polr3f	97	77.228	ENSVPAG00000009063	POLR3F	96	77.228	Vicugna_pacos
ENSEBUG00000006783	polr3f	97	76.898	ENSVVUG00000012925	POLR3F	97	76.299	Vulpes_vulpes
ENSEBUG00000006783	polr3f	100	74.522	ENSXETG00000024898	polr3f	100	74.522	Xenopus_tropicalis
ENSEBUG00000006783	polr3f	88	78.182	ENSXCOG00000010301	polr3f	100	78.182	Xiphophorus_couchianus
ENSEBUG00000006783	polr3f	100	75.000	ENSXMAG00000004604	polr3f	100	75.000	Xiphophorus_maculatus