EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000006844 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 29092 bases
Position: chrFYBX02010254.1:977692-1006783
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000010636	CPSF_A	PF03178.15	3e-91	1	1
ENSEBUP00000010651	CPSF_A	PF03178.15	3.1e-91	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000011187	-	3317	-	ENSEBUP00000010636	391 (aa)	-	-
ENSEBUT00000011201	-	2256	-	ENSEBUP00000010651	395 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000006844's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000006844's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000006844	-	97	74.541	ENSG00000071894	CPSF1	99	68.617	Homo_sapiens
ENSEBUG00000006844	-	97	39.896	WBGene00022301	cpsf-1	94	39.940	Caenorhabditis_elegans
ENSEBUG00000006844	-	98	74.869	ENSTSYG00000028560	CPSF1	90	62.755	Carlito_syrichta
ENSEBUG00000006844	-	97	74.541	ENSCCAG00000037658	CPSF1	90	62.626	Cebus_capucinus
ENSEBUG00000006844	-	97	74.541	ENSCATG00000037234	CPSF1	90	62.245	Cercocebus_atys
ENSEBUG00000006844	-	98	52.196	ENSCSAVG00000002293	-	90	50.256	Ciona_savignyi
ENSEBUG00000006844	-	97	70.866	ENSCANG00000032760	CPSF1	90	62.755	Colobus_angolensis_palliatus
ENSEBUG00000006844	-	98	77.344	ENSCVAG00000014059	cpsf1	90	66.327	Cyprinodon_variegatus
ENSEBUG00000006844	-	61	52.521	ENSGGOG00000040487	-	88	51.795	Gorilla_gorilla
ENSEBUG00000006844	-	97	74.541	ENSGGOG00000016185	CPSF1	90	62.245	Gorilla_gorilla
ENSEBUG00000006844	-	97	74.541	ENSMFAG00000037013	CPSF1	90	62.245	Macaca_fascicularis
ENSEBUG00000006844	-	97	74.541	ENSMMUG00000007380	CPSF1	90	62.245	Macaca_mulatta
ENSEBUG00000006844	-	97	74.541	ENSMNEG00000043564	CPSF1	90	62.245	Macaca_nemestrina
ENSEBUG00000006844	-	97	74.541	ENSMLEG00000043010	CPSF1	90	62.245	Mandrillus_leucophaeus
ENSEBUG00000006844	-	97	74.803	ENSMUSG00000034022	Cpsf1	70	71.765	Mus_musculus
ENSEBUG00000006844	-	50	62.245	ENSNLEG00000010633	-	90	62.245	Nomascus_leucogenys
ENSEBUG00000006844	-	98	75.521	ENSORLG00000013544	cpsf1	92	81.481	Oryzias_latipes
ENSEBUG00000006844	-	98	75.521	ENSORLG00020021693	cpsf1	92	81.481	Oryzias_latipes_hni
ENSEBUG00000006844	-	97	74.541	ENSPPAG00000019280	CPSF1	91	64.677	Pan_paniscus
ENSEBUG00000006844	-	61	51.681	ENSPPAG00000042686	-	74	51.681	Pan_paniscus
ENSEBUG00000006844	-	50	51.795	ENSPTRG00000052516	-	89	51.795	Pan_troglodytes
ENSEBUG00000006844	-	97	74.541	ENSPTRG00000049288	-	91	64.677	Pan_troglodytes
ENSEBUG00000006844	-	97	74.541	ENSPTRG00000051253	-	91	64.677	Pan_troglodytes
ENSEBUG00000006844	-	97	74.541	ENSPANG00000015005	CPSF1	90	62.437	Papio_anubis
ENSEBUG00000006844	-	50	69.898	ENSPMGG00000022177	-	91	69.898	Periophthalmus_magnuspinnatus
ENSEBUG00000006844	-	61	81.933	ENSPLAG00000022739	-	95	81.933	Poecilia_latipinna
ENSEBUG00000006844	-	61	81.933	ENSPMEG00000019534	-	94	81.933	Poecilia_mexicana
ENSEBUG00000006844	-	97	64.660	ENSPCOG00000020001	CPSF1	90	62.121	Propithecus_coquereli
ENSEBUG00000006844	-	97	74.541	ENSRBIG00000044907	CPSF1	90	62.755	Rhinopithecus_bieti
ENSEBUG00000006844	-	97	74.541	ENSRROG00000044861	CPSF1	90	62.755	Rhinopithecus_roxellana
ENSEBUG00000006844	-	97	74.803	ENSSPUG00000014396	CPSF1	90	61.224	Sphenodon_punctatus
ENSEBUG00000006844	-	50	61.224	ENSVVUG00000005940	-	90	61.224	Vulpes_vulpes