EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000006846 (Gene tree)
Gene ID: -
Gene Symbol: farsb
Alias: cb428|farsl|zgc:92055
Full Name: phenylalanyl-tRNA synthetase subunit beta
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 75540 bases
Position: chrFYBX02005469.1:276562-352101
Accession: ZDB-GENE-021206-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000010642	B3_4	PF03483.17	1.6e-27	1	1
ENSEBUP00000010685	B3_4	PF03483.17	9.5e-25	1	1
ENSEBUP00000010685	B5	PF03484.15	3.1e-17	1	1
ENSEBUP00000010642	B5	PF03484.15	3.7e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000011193	-	4780	-	ENSEBUP00000010642	588 (aa)	-	-
ENSEBUT00000011236	-	4666	-	ENSEBUP00000010685	550 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000006846's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000006846's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000006846	farsb	100	65.254	ENSG00000116120	FARSB	100	65.254	Homo_sapiens
ENSEBUG00000006846	farsb	100	64.746	ENSAPOG00000013072	farsb	100	62.635	Acanthochromis_polyacanthus
ENSEBUG00000006846	farsb	100	66.102	ENSAMEG00000005984	FARSB	100	66.102	Ailuropoda_melanoleuca
ENSEBUG00000006846	farsb	100	63.220	ENSACIG00000021623	farsb	100	63.220	Amphilophus_citrinellus
ENSEBUG00000006846	farsb	100	64.576	ENSAOCG00000004912	farsb	100	62.034	Amphiprion_ocellaris
ENSEBUG00000006846	farsb	100	64.576	ENSAPEG00000001153	farsb	100	62.455	Amphiprion_percula
ENSEBUG00000006846	farsb	100	65.593	ENSATEG00000021441	farsb	70	65.593	Anabas_testudineus
ENSEBUG00000006846	farsb	97	64.737	ENSAPLG00000010292	FARSB	97	64.737	Anas_platyrhynchos
ENSEBUG00000006846	farsb	100	64.576	ENSACAG00000004769	FARSB	98	64.576	Anolis_carolinensis
ENSEBUG00000006846	farsb	100	65.085	ENSANAG00000024637	FARSB	100	65.085	Aotus_nancymaae
ENSEBUG00000006846	farsb	100	65.593	ENSACLG00000013951	farsb	100	64.134	Astatotilapia_calliptera
ENSEBUG00000006846	farsb	85	66.400	ENSAMXG00000033881	farsb	100	66.400	Astyanax_mexicanus
ENSEBUG00000006846	farsb	100	65.424	ENSBTAG00000011649	FARSB	100	65.424	Bos_taurus
ENSEBUG00000006846	farsb	96	64.248	ENSBTAG00000045523	-	100	64.248	Bos_taurus
ENSEBUG00000006846	farsb	100	53.885	WBGene00001498	fars-3	100	53.885	Caenorhabditis_elegans
ENSEBUG00000006846	farsb	100	65.424	ENSCJAG00000012181	FARSB	100	65.424	Callithrix_jacchus
ENSEBUG00000006846	farsb	100	65.763	ENSCAFG00000016094	-	100	65.763	Canis_familiaris
ENSEBUG00000006846	farsb	100	63.283	ENSCAFG00020026684	FARSB	100	65.248	Canis_lupus_dingo
ENSEBUG00000006846	farsb	100	65.593	ENSCHIG00000014275	FARSB	100	65.593	Capra_hircus
ENSEBUG00000006846	farsb	100	64.407	ENSTSYG00000008461	FARSB	100	64.407	Carlito_syrichta
ENSEBUG00000006846	farsb	96	59.233	ENSCAPG00000016436	FARSB	99	59.233	Cavia_aperea
ENSEBUG00000006846	farsb	100	65.424	ENSCPOG00000013109	FARSB	100	65.424	Cavia_porcellus
ENSEBUG00000006846	farsb	100	61.695	ENSCCAG00000025840	FARSB	100	61.695	Cebus_capucinus
ENSEBUG00000006846	farsb	100	65.763	ENSCATG00000036168	FARSB	100	65.763	Cercocebus_atys
ENSEBUG00000006846	farsb	100	65.932	ENSCLAG00000011954	FARSB	100	65.932	Chinchilla_lanigera
ENSEBUG00000006846	farsb	100	65.763	ENSCSAG00000007806	FARSB	100	65.763	Chlorocebus_sabaeus
ENSEBUG00000006846	farsb	81	70.787	ENSCHOG00000011785	FARSB	81	70.787	Choloepus_hoffmanni
ENSEBUG00000006846	farsb	100	65.593	ENSCPBG00000019346	FARSB	98	65.593	Chrysemys_picta_bellii
ENSEBUG00000006846	farsb	99	53.266	ENSCING00000004180	-	99	53.266	Ciona_intestinalis
ENSEBUG00000006846	farsb	99	55.946	ENSCSAVG00000005346	-	99	55.946	Ciona_savignyi
ENSEBUG00000006846	farsb	97	65.263	ENSCANG00000036239	FARSB	100	65.263	Colobus_angolensis_palliatus
ENSEBUG00000006846	farsb	100	65.085	ENSCGRG00001022928	Farsb	100	65.085	Cricetulus_griseus_chok1gshd
ENSEBUG00000006846	farsb	100	65.085	ENSCGRG00000001513	Farsb	100	65.085	Cricetulus_griseus_crigri
ENSEBUG00000006846	farsb	100	64.576	ENSCSEG00000005415	farsb	97	63.327	Cynoglossus_semilaevis
ENSEBUG00000006846	farsb	76	68.444	ENSCVAG00000018815	farsb	98	68.444	Cyprinodon_variegatus
ENSEBUG00000006846	farsb	100	67.343	ENSDARG00000016864	farsb	100	67.343	Danio_rerio
ENSEBUG00000006846	farsb	100	63.220	ENSDNOG00000002511	FARSB	100	63.220	Dasypus_novemcinctus
ENSEBUG00000006846	farsb	100	64.746	ENSDORG00000011102	Farsb	100	64.746	Dipodomys_ordii
ENSEBUG00000006846	farsb	100	56.492	FBgn0039175	beta-PheRS	100	56.492	Drosophila_melanogaster
ENSEBUG00000006846	farsb	97	63.333	ENSETEG00000015080	FARSB	100	63.333	Echinops_telfairi
ENSEBUG00000006846	farsb	100	65.085	ENSEASG00005011297	FARSB	100	65.085	Equus_asinus_asinus
ENSEBUG00000006846	farsb	100	62.848	ENSECAG00000023086	FARSB	99	64.771	Equus_caballus
ENSEBUG00000006846	farsb	100	52.542	ENSEEUG00000007441	FARSB	100	52.542	Erinaceus_europaeus
ENSEBUG00000006846	farsb	97	65.734	ENSELUG00000014767	farsb	99	65.734	Esox_lucius
ENSEBUG00000006846	farsb	100	65.593	ENSFCAG00000026772	FARSB	100	65.593	Felis_catus
ENSEBUG00000006846	farsb	99	63.667	ENSFALG00000006739	FARSB	99	63.667	Ficedula_albicollis
ENSEBUG00000006846	farsb	100	65.085	ENSFDAG00000008871	FARSB	100	65.085	Fukomys_damarensis
ENSEBUG00000006846	farsb	100	66.441	ENSFHEG00000020939	farsb	97	66.976	Fundulus_heteroclitus
ENSEBUG00000006846	farsb	91	67.718	ENSGMOG00000013047	farsb	99	67.718	Gadus_morhua
ENSEBUG00000006846	farsb	100	64.407	ENSGALG00000005236	FARSB	100	64.407	Gallus_gallus
ENSEBUG00000006846	farsb	100	66.271	ENSGAFG00000020900	farsb	100	58.752	Gambusia_affinis
ENSEBUG00000006846	farsb	91	65.677	ENSGACG00000000261	farsb	99	65.677	Gasterosteus_aculeatus
ENSEBUG00000006846	farsb	100	65.932	ENSGAGG00000016575	FARSB	98	65.932	Gopherus_agassizii
ENSEBUG00000006846	farsb	100	65.424	ENSHBUG00000022379	farsb	100	63.559	Haplochromis_burtoni
ENSEBUG00000006846	farsb	100	64.915	ENSHGLG00000015965	FARSB	100	64.915	Heterocephalus_glaber_female
ENSEBUG00000006846	farsb	100	64.915	ENSHGLG00100001035	FARSB	100	64.915	Heterocephalus_glaber_male
ENSEBUG00000006846	farsb	91	59.701	ENSHCOG00000016462	farsb	99	59.701	Hippocampus_comes
ENSEBUG00000006846	farsb	100	68.305	ENSIPUG00000002754	farsb	100	68.305	Ictalurus_punctatus
ENSEBUG00000006846	farsb	100	64.746	ENSSTOG00000016169	FARSB	100	64.746	Ictidomys_tridecemlineatus
ENSEBUG00000006846	farsb	100	64.407	ENSJJAG00000003267	Farsb	100	64.407	Jaculus_jaculus
ENSEBUG00000006846	farsb	100	57.886	ENSKMAG00000005363	farsb	100	57.886	Kryptolebias_marmoratus
ENSEBUG00000006846	farsb	100	64.576	ENSLBEG00000018127	farsb	70	64.576	Labrus_bergylta
ENSEBUG00000006846	farsb	100	65.085	ENSLACG00000002551	FARSB	100	65.085	Latimeria_chalumnae
ENSEBUG00000006846	farsb	100	66.610	ENSLOCG00000004136	farsb	100	66.610	Lepisosteus_oculatus
ENSEBUG00000006846	farsb	100	65.254	ENSLAFG00000015659	FARSB	100	65.254	Loxodonta_africana
ENSEBUG00000006846	farsb	100	65.763	ENSMFAG00000036645	FARSB	100	65.763	Macaca_fascicularis
ENSEBUG00000006846	farsb	100	62.881	ENSMMUG00000007685	FARSB	100	62.881	Macaca_mulatta
ENSEBUG00000006846	farsb	100	65.593	ENSMNEG00000030672	FARSB	100	65.593	Macaca_nemestrina
ENSEBUG00000006846	farsb	100	65.763	ENSMLEG00000042060	FARSB	100	65.763	Mandrillus_leucophaeus
ENSEBUG00000006846	farsb	100	65.424	ENSMAMG00000011835	farsb	100	60.000	Mastacembelus_armatus
ENSEBUG00000006846	farsb	96	64.071	ENSMZEG00005004544	farsb	100	64.071	Maylandia_zebra
ENSEBUG00000006846	farsb	95	63.214	ENSMGAG00000004670	FARSB	100	63.214	Meleagris_gallopavo
ENSEBUG00000006846	farsb	72	69.697	ENSMAUG00000017805	Farsb	100	69.697	Mesocricetus_auratus
ENSEBUG00000006846	farsb	100	65.424	ENSMICG00000002495	FARSB	100	65.424	Microcebus_murinus
ENSEBUG00000006846	farsb	100	64.915	ENSMOCG00000003181	Farsb	100	64.915	Microtus_ochrogaster
ENSEBUG00000006846	farsb	100	60.071	ENSMMOG00000006265	farsb	100	60.071	Mola_mola
ENSEBUG00000006846	farsb	100	66.102	ENSMODG00000021192	FARSB	100	66.102	Monodelphis_domestica
ENSEBUG00000006846	farsb	94	66.304	ENSMALG00000021188	farsb	92	66.304	Monopterus_albus
ENSEBUG00000006846	farsb	100	65.254	MGP_CAROLIEiJ_G0014310	Farsb	99	69.492	Mus_caroli
ENSEBUG00000006846	farsb	100	65.424	ENSMUSG00000026245	Farsb	99	69.492	Mus_musculus
ENSEBUG00000006846	farsb	100	65.424	MGP_PahariEiJ_G0027548	Farsb	99	69.915	Mus_pahari
ENSEBUG00000006846	farsb	100	65.424	MGP_SPRETEiJ_G0015116	Farsb	99	69.915	Mus_spretus
ENSEBUG00000006846	farsb	100	65.424	ENSMPUG00000016677	FARSB	100	65.424	Mustela_putorius_furo
ENSEBUG00000006846	farsb	100	65.932	ENSMLUG00000010904	FARSB	100	65.932	Myotis_lucifugus
ENSEBUG00000006846	farsb	100	64.407	ENSNGAG00000014602	Farsb	100	64.407	Nannospalax_galili
ENSEBUG00000006846	farsb	100	65.254	ENSNBRG00000003198	farsb	100	61.695	Neolamprologus_brichardi
ENSEBUG00000006846	farsb	100	65.254	ENSNLEG00000009638	FARSB	100	65.254	Nomascus_leucogenys
ENSEBUG00000006846	farsb	100	57.627	ENSMEUG00000010798	FARSB	100	57.627	Notamacropus_eugenii
ENSEBUG00000006846	farsb	89	60.000	ENSOPRG00000003292	FARSB	89	60.000	Ochotona_princeps
ENSEBUG00000006846	farsb	100	64.915	ENSODEG00000005451	FARSB	100	64.915	Octodon_degus
ENSEBUG00000006846	farsb	100	64.746	ENSONIG00000014639	farsb	100	64.746	Oreochromis_niloticus
ENSEBUG00000006846	farsb	88	65.577	ENSOANG00000015387	FARSB	97	65.577	Ornithorhynchus_anatinus
ENSEBUG00000006846	farsb	91	64.564	ENSOCUG00000007828	FARSB	94	64.564	Oryctolagus_cuniculus
ENSEBUG00000006846	farsb	100	65.763	ENSORLG00000009135	farsb	100	63.390	Oryzias_latipes
ENSEBUG00000006846	farsb	100	65.763	ENSORLG00015001072	farsb	100	59.153	Oryzias_latipes_hsok
ENSEBUG00000006846	farsb	100	65.990	ENSOMEG00000019009	farsb	100	63.415	Oryzias_melastigma
ENSEBUG00000006846	farsb	100	60.201	ENSOGAG00000010125	FARSB	100	60.201	Otolemur_garnettii
ENSEBUG00000006846	farsb	100	65.763	ENSOARG00000020329	FARSB	100	65.763	Ovis_aries
ENSEBUG00000006846	farsb	100	65.763	ENSPPAG00000039268	FARSB	100	65.763	Pan_paniscus
ENSEBUG00000006846	farsb	100	65.254	ENSPPRG00000010687	FARSB	100	65.254	Panthera_pardus
ENSEBUG00000006846	farsb	100	65.254	ENSPTIG00000004299	FARSB	100	65.254	Panthera_tigris_altaica
ENSEBUG00000006846	farsb	100	65.763	ENSPTRG00000012974	FARSB	100	65.763	Pan_troglodytes
ENSEBUG00000006846	farsb	100	65.763	ENSPANG00000016304	FARSB	100	65.763	Papio_anubis
ENSEBUG00000006846	farsb	100	65.932	ENSPKIG00000006661	farsb	100	65.932	Paramormyrops_kingsleyae
ENSEBUG00000006846	farsb	99	64.796	ENSPSIG00000006248	FARSB	99	64.796	Pelodiscus_sinensis
ENSEBUG00000006846	farsb	83	65.377	ENSPMGG00000002815	farsb	100	65.377	Periophthalmus_magnuspinnatus
ENSEBUG00000006846	farsb	100	64.746	ENSPEMG00000003131	Farsb	100	64.746	Peromyscus_maniculatus_bairdii
ENSEBUG00000006846	farsb	100	65.593	ENSPCIG00000019458	FARSB	100	65.593	Phascolarctos_cinereus
ENSEBUG00000006846	farsb	100	66.271	ENSPLAG00000001104	farsb	100	61.131	Poecilia_latipinna
ENSEBUG00000006846	farsb	100	66.271	ENSPMEG00000017658	farsb	100	61.131	Poecilia_mexicana
ENSEBUG00000006846	farsb	100	66.271	ENSPREG00000010583	farsb	100	61.695	Poecilia_reticulata
ENSEBUG00000006846	farsb	100	65.424	ENSPPYG00000013221	FARSB	100	65.424	Pongo_abelii
ENSEBUG00000006846	farsb	84	58.149	ENSPCAG00000002757	FARSB	84	58.149	Procavia_capensis
ENSEBUG00000006846	farsb	66	81.579	ENSPCOG00000028852	FARSB	100	81.579	Propithecus_coquereli
ENSEBUG00000006846	farsb	100	65.254	ENSPVAG00000006985	FARSB	100	65.254	Pteropus_vampyrus
ENSEBUG00000006846	farsb	100	56.610	ENSPNYG00000011433	farsb	100	56.610	Pundamilia_nyererei
ENSEBUG00000006846	farsb	100	67.966	ENSPNAG00000021802	farsb	100	67.966	Pygocentrus_nattereri
ENSEBUG00000006846	farsb	100	65.424	ENSRNOG00000014119	Farsb	100	65.424	Rattus_norvegicus
ENSEBUG00000006846	farsb	92	65.746	ENSRBIG00000033191	FARSB	97	66.048	Rhinopithecus_bieti
ENSEBUG00000006846	farsb	100	65.763	ENSRROG00000029388	FARSB	100	65.763	Rhinopithecus_roxellana
ENSEBUG00000006846	farsb	100	45.024	YLR060W	FRS1	100	45.024	Saccharomyces_cerevisiae
ENSEBUG00000006846	farsb	100	59.831	ENSSBOG00000019084	FARSB	100	59.831	Saimiri_boliviensis_boliviensis
ENSEBUG00000006846	farsb	89	63.128	ENSSHAG00000015752	FARSB	98	63.128	Sarcophilus_harrisii
ENSEBUG00000006846	farsb	100	63.559	ENSSFOG00015007850	farsb	100	63.559	Scleropages_formosus
ENSEBUG00000006846	farsb	100	65.254	ENSSMAG00000020668	farsb	100	63.390	Scophthalmus_maximus
ENSEBUG00000006846	farsb	100	64.746	ENSSDUG00000009685	farsb	100	60.403	Seriola_dumerili
ENSEBUG00000006846	farsb	100	64.576	ENSSLDG00000025206	farsb	100	61.812	Seriola_lalandi_dorsalis
ENSEBUG00000006846	farsb	53	71.918	ENSSARG00000005655	-	66	62.019	Sorex_araneus
ENSEBUG00000006846	farsb	95	60.676	ENSSPUG00000002245	FARSB	100	60.676	Sphenodon_punctatus
ENSEBUG00000006846	farsb	100	65.085	ENSSPAG00000007367	farsb	69	65.085	Stegastes_partitus
ENSEBUG00000006846	farsb	100	60.406	ENSSSCG00000032016	-	100	60.406	Sus_scrofa
ENSEBUG00000006846	farsb	100	66.102	ENSSSCG00000016226	-	100	66.102	Sus_scrofa
ENSEBUG00000006846	farsb	97	64.561	ENSTGUG00000007788	FARSB	99	64.561	Taeniopygia_guttata
ENSEBUG00000006846	farsb	100	64.407	ENSTRUG00000009483	farsb	70	64.407	Takifugu_rubripes
ENSEBUG00000006846	farsb	100	64.915	ENSTNIG00000014310	farsb	100	64.915	Tetraodon_nigroviridis
ENSEBUG00000006846	farsb	96	53.556	ENSTBEG00000003136	FARSB	100	43.898	Tupaia_belangeri
ENSEBUG00000006846	farsb	88	60.804	ENSTTRG00000009082	FARSB	88	60.804	Tursiops_truncatus
ENSEBUG00000006846	farsb	84	63.655	ENSUAMG00000024613	FARSB	98	63.655	Ursus_americanus
ENSEBUG00000006846	farsb	100	65.763	ENSUMAG00000017995	FARSB	100	65.763	Ursus_maritimus
ENSEBUG00000006846	farsb	91	63.586	ENSVPAG00000006844	FARSB	99	63.586	Vicugna_pacos
ENSEBUG00000006846	farsb	100	65.763	ENSVVUG00000024025	FARSB	100	65.763	Vulpes_vulpes
ENSEBUG00000006846	farsb	100	65.144	ENSXETG00000002934	farsb	100	65.144	Xenopus_tropicalis
ENSEBUG00000006846	farsb	100	66.780	ENSXMAG00000008280	farsb	100	59.831	Xiphophorus_maculatus