EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000006874 (Gene tree)
Gene ID: -
Gene Symbol: c1d
Alias: zgc:103509
Full Name: C1D nuclear receptor corepressor
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 11436 bases
Position: chrFYBX02010101.1:3406727-3418162
Accession: ZDB-GENE-041024-8
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000010687	Sas10_Utp3	PF04000.15	5e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000011238	-	480	-	ENSEBUP00000010687	159 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000006874's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000006874's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000006874	c1d	86	53.285	ENSG00000197223	C1D	89	56.000	Homo_sapiens
ENSEBUG00000006874	c1d	75	53.782	ENSAPOG00000005466	c1d	80	53.782	Acanthochromis_polyacanthus
ENSEBUG00000006874	c1d	77	56.557	ENSAMEG00000004859	C1D	84	56.557	Ailuropoda_melanoleuca
ENSEBUG00000006874	c1d	76	52.066	ENSACIG00000012684	c1d	79	52.066	Amphilophus_citrinellus
ENSEBUG00000006874	c1d	80	51.538	ENSAOCG00000020354	c1d	88	51.538	Amphiprion_ocellaris
ENSEBUG00000006874	c1d	75	53.333	ENSAPEG00000001403	c1d	82	50.394	Amphiprion_percula
ENSEBUG00000006874	c1d	72	53.509	ENSATEG00000012922	c1d	74	53.509	Anabas_testudineus
ENSEBUG00000006874	c1d	84	54.412	ENSAPLG00000009320	C1D	95	53.623	Anas_platyrhynchos
ENSEBUG00000006874	c1d	74	57.265	ENSACAG00000001337	C1D	96	57.265	Anolis_carolinensis
ENSEBUG00000006874	c1d	77	57.377	ENSANAG00000035972	-	87	57.377	Aotus_nancymaae
ENSEBUG00000006874	c1d	77	55.738	ENSANAG00000005773	-	87	55.738	Aotus_nancymaae
ENSEBUG00000006874	c1d	72	54.386	ENSACLG00000026206	c1d	81	52.066	Astatotilapia_calliptera
ENSEBUG00000006874	c1d	80	49.231	ENSAMXG00000043212	c1d	89	49.231	Astyanax_mexicanus
ENSEBUG00000006874	c1d	76	57.025	ENSBTAG00000049002	C1D	86	57.025	Bos_taurus
ENSEBUG00000006874	c1d	66	52.381	ENSCJAG00000044668	-	73	53.191	Callithrix_jacchus
ENSEBUG00000006874	c1d	77	57.377	ENSCJAG00000006589	C1D	80	57.377	Callithrix_jacchus
ENSEBUG00000006874	c1d	77	56.557	ENSCAFG00000030099	C1D	87	56.557	Canis_familiaris
ENSEBUG00000006874	c1d	77	56.557	ENSCAFG00020026997	C1D	87	56.557	Canis_lupus_dingo
ENSEBUG00000006874	c1d	76	57.025	ENSCHIG00000025729	C1D	86	57.025	Capra_hircus
ENSEBUG00000006874	c1d	84	49.624	ENSTSYG00000026573	-	82	49.624	Carlito_syrichta
ENSEBUG00000006874	c1d	77	55.738	ENSTSYG00000035739	-	87	55.738	Carlito_syrichta
ENSEBUG00000006874	c1d	70	47.321	ENSCAPG00000011523	-	81	47.423	Cavia_aperea
ENSEBUG00000006874	c1d	69	47.706	ENSCPOG00000020112	-	81	47.423	Cavia_porcellus
ENSEBUG00000006874	c1d	77	57.377	ENSCPOG00000037986	-	87	57.377	Cavia_porcellus
ENSEBUG00000006874	c1d	86	53.676	ENSCCAG00000030405	-	87	57.377	Cebus_capucinus
ENSEBUG00000006874	c1d	77	56.557	ENSCATG00000043348	-	87	56.557	Cercocebus_atys
ENSEBUG00000006874	c1d	77	57.377	ENSCATG00000045336	C1D	87	57.377	Cercocebus_atys
ENSEBUG00000006874	c1d	77	56.557	ENSCLAG00000011883	C1D	87	56.557	Chinchilla_lanigera
ENSEBUG00000006874	c1d	77	57.377	ENSCSAG00000014811	C1D	87	57.377	Chlorocebus_sabaeus
ENSEBUG00000006874	c1d	77	56.557	ENSCHOG00000006719	C1D	68	56.557	Choloepus_hoffmanni
ENSEBUG00000006874	c1d	76	56.198	ENSCPBG00000014451	C1D	82	56.198	Chrysemys_picta_bellii
ENSEBUG00000006874	c1d	74	42.373	ENSCING00000020906	-	62	42.373	Ciona_intestinalis
ENSEBUG00000006874	c1d	78	40.323	ENSCSAVG00000000150	-	71	40.323	Ciona_savignyi
ENSEBUG00000006874	c1d	75	49.580	ENSCANG00000036599	-	97	49.580	Colobus_angolensis_palliatus
ENSEBUG00000006874	c1d	86	54.412	ENSCANG00000035564	C1D	89	56.800	Colobus_angolensis_palliatus
ENSEBUG00000006874	c1d	77	57.724	ENSCGRG00001023376	C1d	87	57.724	Cricetulus_griseus_chok1gshd
ENSEBUG00000006874	c1d	77	57.724	ENSCGRG00000010245	C1d	87	57.724	Cricetulus_griseus_crigri
ENSEBUG00000006874	c1d	74	52.991	ENSCSEG00000000587	c1d	87	48.148	Cynoglossus_semilaevis
ENSEBUG00000006874	c1d	75	50.833	ENSCVAG00000004603	c1d	79	50.833	Cyprinodon_variegatus
ENSEBUG00000006874	c1d	72	55.263	ENSDARG00000021112	c1d	80	52.941	Danio_rerio
ENSEBUG00000006874	c1d	77	48.361	ENSDNOG00000046068	-	87	48.361	Dasypus_novemcinctus
ENSEBUG00000006874	c1d	77	56.098	ENSDORG00000003300	C1d	88	55.645	Dipodomys_ordii
ENSEBUG00000006874	c1d	50	66.250	ENSETEG00000014857	C1D	84	66.250	Echinops_telfairi
ENSEBUG00000006874	c1d	77	56.557	ENSEASG00005007307	C1D	79	56.557	Equus_asinus_asinus
ENSEBUG00000006874	c1d	77	56.557	ENSECAG00000002187	C1D	87	56.557	Equus_caballus
ENSEBUG00000006874	c1d	76	54.545	ENSELUG00000014823	c1d	83	54.545	Esox_lucius
ENSEBUG00000006874	c1d	77	56.557	ENSFCAG00000028933	C1D	87	56.557	Felis_catus
ENSEBUG00000006874	c1d	78	57.258	ENSFALG00000013640	C1D	75	57.258	Ficedula_albicollis
ENSEBUG00000006874	c1d	57	60.440	ENSFDAG00000014175	-	74	60.440	Fukomys_damarensis
ENSEBUG00000006874	c1d	78	56.452	ENSFDAG00000010462	-	88	56.452	Fukomys_damarensis
ENSEBUG00000006874	c1d	75	52.941	ENSFHEG00000010545	c1d	83	52.941	Fundulus_heteroclitus
ENSEBUG00000006874	c1d	72	47.826	ENSGMOG00000013911	-	91	47.826	Gadus_morhua
ENSEBUG00000006874	c1d	80	57.480	ENSGALG00000008765	C1D	88	57.480	Gallus_gallus
ENSEBUG00000006874	c1d	75	50.420	ENSGAFG00000012578	c1d	76	50.420	Gambusia_affinis
ENSEBUG00000006874	c1d	73	50.000	ENSGACG00000011981	c1d	91	50.000	Gasterosteus_aculeatus
ENSEBUG00000006874	c1d	76	55.372	ENSGAGG00000013383	C1D	82	55.372	Gopherus_agassizii
ENSEBUG00000006874	c1d	77	56.557	ENSGGOG00000022296	-	87	56.557	Gorilla_gorilla
ENSEBUG00000006874	c1d	74	56.410	ENSGGOG00000025808	-	67	56.410	Gorilla_gorilla
ENSEBUG00000006874	c1d	86	53.676	ENSGGOG00000025982	-	76	53.676	Gorilla_gorilla
ENSEBUG00000006874	c1d	72	54.386	ENSHBUG00000018531	c1d	72	52.066	Haplochromis_burtoni
ENSEBUG00000006874	c1d	77	50.820	ENSHGLG00000021219	-	87	50.820	Heterocephalus_glaber_female
ENSEBUG00000006874	c1d	77	58.197	ENSHGLG00000012332	-	87	58.197	Heterocephalus_glaber_female
ENSEBUG00000006874	c1d	77	51.639	ENSHGLG00100019951	-	87	51.639	Heterocephalus_glaber_male
ENSEBUG00000006874	c1d	77	59.016	ENSHGLG00100000221	-	86	59.016	Heterocephalus_glaber_male
ENSEBUG00000006874	c1d	76	50.413	ENSHCOG00000014589	c1d	82	50.413	Hippocampus_comes
ENSEBUG00000006874	c1d	76	50.413	ENSHCOG00000014568	C1D	82	50.413	Hippocampus_comes
ENSEBUG00000006874	c1d	74	49.153	ENSIPUG00000018661	c1d	82	49.153	Ictalurus_punctatus
ENSEBUG00000006874	c1d	79	56.800	ENSSTOG00000012346	C1D	89	56.800	Ictidomys_tridecemlineatus
ENSEBUG00000006874	c1d	77	54.098	ENSJJAG00000009540	-	88	54.098	Jaculus_jaculus
ENSEBUG00000006874	c1d	77	49.600	ENSJJAG00000016086	-	89	49.600	Jaculus_jaculus
ENSEBUG00000006874	c1d	77	52.381	ENSJJAG00000023186	-	96	52.381	Jaculus_jaculus
ENSEBUG00000006874	c1d	77	52.459	ENSJJAG00000005044	-	88	52.459	Jaculus_jaculus
ENSEBUG00000006874	c1d	80	50.746	ENSKMAG00000015077	c1d	85	50.746	Kryptolebias_marmoratus
ENSEBUG00000006874	c1d	73	51.724	ENSLBEG00000008351	c1d	75	51.724	Labrus_bergylta
ENSEBUG00000006874	c1d	78	59.677	ENSLACG00000007516	C1D	83	59.677	Latimeria_chalumnae
ENSEBUG00000006874	c1d	84	49.630	ENSLOCG00000016024	c1d	92	49.630	Lepisosteus_oculatus
ENSEBUG00000006874	c1d	77	56.557	ENSLAFG00000002083	C1D	87	56.557	Loxodonta_africana
ENSEBUG00000006874	c1d	77	56.557	ENSMFAG00000028681	-	87	56.557	Macaca_fascicularis
ENSEBUG00000006874	c1d	77	57.377	ENSMFAG00000034261	C1D	87	57.377	Macaca_fascicularis
ENSEBUG00000006874	c1d	77	55.738	ENSMFAG00000034034	-	87	55.738	Macaca_fascicularis
ENSEBUG00000006874	c1d	77	54.918	ENSMMUG00000043184	-	87	54.918	Macaca_mulatta
ENSEBUG00000006874	c1d	77	57.377	ENSMMUG00000017209	-	87	57.377	Macaca_mulatta
ENSEBUG00000006874	c1d	77	57.377	ENSMMUG00000041557	C1D	88	57.377	Macaca_mulatta
ENSEBUG00000006874	c1d	77	55.738	ENSMNEG00000020626	-	87	55.738	Macaca_nemestrina
ENSEBUG00000006874	c1d	77	57.377	ENSMNEG00000040612	C1D	87	57.377	Macaca_nemestrina
ENSEBUG00000006874	c1d	77	56.557	ENSMLEG00000028412	-	87	56.557	Mandrillus_leucophaeus
ENSEBUG00000006874	c1d	77	57.377	ENSMLEG00000027619	C1D	87	57.377	Mandrillus_leucophaeus
ENSEBUG00000006874	c1d	72	54.386	ENSMAMG00000022156	c1d	81	52.000	Mastacembelus_armatus
ENSEBUG00000006874	c1d	72	54.386	ENSMZEG00005027343	c1d	83	52.066	Maylandia_zebra
ENSEBUG00000006874	c1d	78	57.258	ENSMGAG00000004517	C1D	87	57.258	Meleagris_gallopavo
ENSEBUG00000006874	c1d	80	55.906	ENSMAUG00000008974	C1d	90	55.906	Mesocricetus_auratus
ENSEBUG00000006874	c1d	77	55.738	ENSMICG00000032141	C1D	87	55.738	Microcebus_murinus
ENSEBUG00000006874	c1d	77	57.724	ENSMOCG00000010860	C1d	87	57.724	Microtus_ochrogaster
ENSEBUG00000006874	c1d	75	52.941	ENSMMOG00000007332	c1d	81	49.580	Mola_mola
ENSEBUG00000006874	c1d	80	54.331	ENSMODG00000003561	C1D	89	54.331	Monodelphis_domestica
ENSEBUG00000006874	c1d	77	50.407	ENSMALG00000020864	c1d	92	50.407	Monopterus_albus
ENSEBUG00000006874	c1d	74	60.684	MGP_CAROLIEiJ_G0016110	C1d	92	59.633	Mus_caroli
ENSEBUG00000006874	c1d	74	60.684	ENSMUSG00000000581	C1d	92	59.633	Mus_musculus
ENSEBUG00000006874	c1d	74	59.829	MGP_PahariEiJ_G0016781	C1d	92	58.716	Mus_pahari
ENSEBUG00000006874	c1d	74	60.684	MGP_SPRETEiJ_G0016952	C1d	92	59.633	Mus_spretus
ENSEBUG00000006874	c1d	77	57.377	ENSMPUG00000006224	C1D	87	57.377	Mustela_putorius_furo
ENSEBUG00000006874	c1d	83	52.985	ENSMLUG00000029990	-	95	52.985	Myotis_lucifugus
ENSEBUG00000006874	c1d	79	56.000	ENSMLUG00000010791	-	89	56.000	Myotis_lucifugus
ENSEBUG00000006874	c1d	79	54.400	ENSMLUG00000024947	-	89	54.400	Myotis_lucifugus
ENSEBUG00000006874	c1d	77	53.279	ENSNGAG00000016675	-	87	53.279	Nannospalax_galili
ENSEBUG00000006874	c1d	77	55.738	ENSNGAG00000011872	-	87	55.738	Nannospalax_galili
ENSEBUG00000006874	c1d	69	55.046	ENSNGAG00000012482	-	87	55.046	Nannospalax_galili
ENSEBUG00000006874	c1d	72	55.263	ENSNBRG00000010704	c1d	83	52.893	Neolamprologus_brichardi
ENSEBUG00000006874	c1d	86	52.941	ENSNLEG00000032919	-	76	52.941	Nomascus_leucogenys
ENSEBUG00000006874	c1d	77	56.557	ENSOPRG00000009586	C1D	87	56.557	Ochotona_princeps
ENSEBUG00000006874	c1d	77	56.557	ENSODEG00000011242	-	87	56.557	Octodon_degus
ENSEBUG00000006874	c1d	77	56.557	ENSODEG00000018885	-	88	56.557	Octodon_degus
ENSEBUG00000006874	c1d	79	50.400	ENSODEG00000018525	-	89	50.400	Octodon_degus
ENSEBUG00000006874	c1d	72	53.509	ENSONIG00000001233	c1d	81	51.240	Oreochromis_niloticus
ENSEBUG00000006874	c1d	59	59.574	ENSOANG00000008385	C1D	95	56.190	Ornithorhynchus_anatinus
ENSEBUG00000006874	c1d	77	56.557	ENSOCUG00000009771	-	87	56.557	Oryctolagus_cuniculus
ENSEBUG00000006874	c1d	77	56.557	ENSOCUG00000025587	-	87	56.557	Oryctolagus_cuniculus
ENSEBUG00000006874	c1d	77	52.000	ENSORLG00000021968	c1d	86	49.254	Oryzias_latipes
ENSEBUG00000006874	c1d	77	52.000	ENSORLG00020000507	c1d	87	49.254	Oryzias_latipes_hni
ENSEBUG00000006874	c1d	79	50.000	ENSORLG00015004594	c1d	80	50.000	Oryzias_latipes_hsok
ENSEBUG00000006874	c1d	81	50.388	ENSOMEG00000004672	c1d	82	50.388	Oryzias_melastigma
ENSEBUG00000006874	c1d	77	54.918	ENSOGAG00000027934	-	87	54.918	Otolemur_garnettii
ENSEBUG00000006874	c1d	76	57.025	ENSOARG00000019931	C1D	85	57.025	Ovis_aries
ENSEBUG00000006874	c1d	86	53.676	ENSPPAG00000037847	-	87	57.377	Pan_paniscus
ENSEBUG00000006874	c1d	73	56.897	ENSPPAG00000040091	-	67	56.897	Pan_paniscus
ENSEBUG00000006874	c1d	53	50.575	ENSPPRG00000022830	-	76	50.575	Panthera_pardus
ENSEBUG00000006874	c1d	77	56.557	ENSPPRG00000017045	-	87	56.557	Panthera_pardus
ENSEBUG00000006874	c1d	77	56.557	ENSPTIG00000009414	C1D	87	56.557	Panthera_tigris_altaica
ENSEBUG00000006874	c1d	86	53.676	ENSPTRG00000023558	C1D	87	57.377	Pan_troglodytes
ENSEBUG00000006874	c1d	77	57.377	ENSPANG00000000501	-	87	57.377	Papio_anubis
ENSEBUG00000006874	c1d	86	53.676	ENSPANG00000002886	C1D	76	53.676	Papio_anubis
ENSEBUG00000006874	c1d	79	48.800	ENSPKIG00000004877	c1d	84	48.800	Paramormyrops_kingsleyae
ENSEBUG00000006874	c1d	75	56.667	ENSPSIG00000010015	C1D	83	56.667	Pelodiscus_sinensis
ENSEBUG00000006874	c1d	74	49.573	ENSPMGG00000009326	c1d	79	47.541	Periophthalmus_magnuspinnatus
ENSEBUG00000006874	c1d	83	50.376	ENSPCIG00000006831	-	97	48.921	Phascolarctos_cinereus
ENSEBUG00000006874	c1d	83	52.632	ENSPCIG00000018629	-	94	52.632	Phascolarctos_cinereus
ENSEBUG00000006874	c1d	80	49.606	ENSPFOG00000003686	c1d	82	49.606	Poecilia_formosa
ENSEBUG00000006874	c1d	80	49.606	ENSPLAG00000000228	c1d	90	49.606	Poecilia_latipinna
ENSEBUG00000006874	c1d	80	49.606	ENSPMEG00000023213	c1d	82	49.606	Poecilia_mexicana
ENSEBUG00000006874	c1d	80	49.606	ENSPREG00000000742	c1d	89	49.606	Poecilia_reticulata
ENSEBUG00000006874	c1d	77	54.098	ENSPPYG00000002294	-	87	54.098	Pongo_abelii
ENSEBUG00000006874	c1d	77	57.377	ENSPPYG00000012354	C1D	67	57.377	Pongo_abelii
ENSEBUG00000006874	c1d	77	48.361	ENSPCAG00000010088	C1D	68	48.361	Procavia_capensis
ENSEBUG00000006874	c1d	77	55.738	ENSPCOG00000016112	C1D	87	55.738	Propithecus_coquereli
ENSEBUG00000006874	c1d	86	53.623	ENSPVAG00000012692	C1D	68	56.557	Pteropus_vampyrus
ENSEBUG00000006874	c1d	72	54.386	ENSPNYG00000008789	c1d	83	52.066	Pundamilia_nyererei
ENSEBUG00000006874	c1d	80	48.462	ENSPNAG00000004219	c1d	89	48.462	Pygocentrus_nattereri
ENSEBUG00000006874	c1d	74	59.829	ENSRNOG00000005982	C1d	83	59.829	Rattus_norvegicus
ENSEBUG00000006874	c1d	77	56.557	ENSRBIG00000026211	-	87	56.557	Rhinopithecus_bieti
ENSEBUG00000006874	c1d	77	56.557	ENSRROG00000005944	-	87	56.557	Rhinopithecus_roxellana
ENSEBUG00000006874	c1d	77	57.377	ENSRROG00000029013	C1D	87	57.377	Rhinopithecus_roxellana
ENSEBUG00000006874	c1d	77	57.377	ENSSBOG00000025275	C1D	87	57.377	Saimiri_boliviensis_boliviensis
ENSEBUG00000006874	c1d	80	52.756	ENSSHAG00000008352	C1D	61	52.756	Sarcophilus_harrisii
ENSEBUG00000006874	c1d	81	48.837	ENSSFOG00015010861	c1d	92	48.837	Scleropages_formosus
ENSEBUG00000006874	c1d	73	50.862	ENSSMAG00000019230	c1d	75	50.862	Scophthalmus_maximus
ENSEBUG00000006874	c1d	73	53.448	ENSSDUG00000020213	c1d	75	53.448	Seriola_dumerili
ENSEBUG00000006874	c1d	73	53.448	ENSSLDG00000017371	c1d	75	53.448	Seriola_lalandi_dorsalis
ENSEBUG00000006874	c1d	77	57.377	ENSSPUG00000006525	C1D	85	57.258	Sphenodon_punctatus
ENSEBUG00000006874	c1d	72	55.263	ENSSPAG00000008574	c1d	78	52.066	Stegastes_partitus
ENSEBUG00000006874	c1d	67	45.794	ENSSSCG00000035701	-	74	47.191	Sus_scrofa
ENSEBUG00000006874	c1d	77	56.557	ENSSSCG00000039331	-	87	56.557	Sus_scrofa
ENSEBUG00000006874	c1d	78	57.258	ENSTGUG00000002367	C1D	86	57.258	Taeniopygia_guttata
ENSEBUG00000006874	c1d	77	50.820	ENSTRUG00000012245	c1d	73	50.820	Takifugu_rubripes
ENSEBUG00000006874	c1d	73	53.448	ENSTNIG00000009827	c1d	78	53.448	Tetraodon_nigroviridis
ENSEBUG00000006874	c1d	77	56.557	ENSTBEG00000009797	C1D	95	53.731	Tupaia_belangeri
ENSEBUG00000006874	c1d	82	54.198	ENSTTRG00000013982	C1D	75	54.198	Tursiops_truncatus
ENSEBUG00000006874	c1d	67	56.881	ENSUAMG00000025246	C1D	82	56.881	Ursus_americanus
ENSEBUG00000006874	c1d	59	44.330	ENSUMAG00000006451	-	76	44.330	Ursus_maritimus
ENSEBUG00000006874	c1d	77	56.557	ENSUMAG00000021118	-	87	56.557	Ursus_maritimus
ENSEBUG00000006874	c1d	74	57.265	ENSVPAG00000012080	C1D	66	57.265	Vicugna_pacos
ENSEBUG00000006874	c1d	77	56.557	ENSVVUG00000027629	C1D	76	56.557	Vulpes_vulpes
ENSEBUG00000006874	c1d	75	56.303	ENSXETG00000025934	c1d	82	56.303	Xenopus_tropicalis
ENSEBUG00000006874	c1d	78	52.419	ENSXCOG00000013813	c1d	81	52.000	Xiphophorus_couchianus
ENSEBUG00000006874	c1d	78	52.419	ENSXMAG00000022273	c1d	81	52.000	Xiphophorus_maculatus