EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000007086 (Gene tree)
Gene ID: -
Gene Symbol: vars (1 of many)
Alias: CHUNP6879|im:7137378|vars2|wu:fb07a11|wu:fb07d10
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 21034 bases
Position: chrFYBX02010623.1:489680-510713
Accession: ZDB-GENE-010601-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000011062	Anticodon_1	PF08264.13	1.2e-26	1	1
ENSEBUP00000011062	tRNA-synt_1	PF00133.22	2.7e-123	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000011620	-	2370	-	ENSEBUP00000011062	789 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000007086's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000007086's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000007086	vars	82	99.465	ENSEBUG00000004637	vars	88	99.465

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000007086	vars	72	69.459	ENSG00000204394	VARS	99	68.098	Homo_sapiens
ENSEBUG00000007086	vars	81	71.875	ENSAPOG00000020691	vars	53	71.875	Acanthochromis_polyacanthus
ENSEBUG00000007086	vars	81	71.875	ENSAPOG00000020921	vars	53	71.875	Acanthochromis_polyacanthus
ENSEBUG00000007086	vars	84	69.808	ENSAMEG00000006417	VARS	50	70.962	Ailuropoda_melanoleuca
ENSEBUG00000007086	vars	83	74.177	ENSACIG00000013752	vars	53	74.177	Amphilophus_citrinellus
ENSEBUG00000007086	vars	82	72.964	ENSAOCG00000002447	vars	53	72.790	Amphiprion_ocellaris
ENSEBUG00000007086	vars	82	73.137	ENSAPEG00000010638	vars	51	73.137	Amphiprion_percula
ENSEBUG00000007086	vars	81	72.855	ENSATEG00000020219	vars	52	72.855	Anabas_testudineus
ENSEBUG00000007086	vars	84	69.634	ENSANAG00000015453	VARS	50	70.652	Aotus_nancymaae
ENSEBUG00000007086	vars	84	69.459	ENSBTAG00000005631	VARS	50	70.417	Bos_taurus
ENSEBUG00000007086	vars	84	69.808	ENSCAFG00000000636	VARS	50	70.780	Canis_familiaris
ENSEBUG00000007086	vars	84	69.983	ENSCHIG00000011008	VARS	50	70.833	Capra_hircus
ENSEBUG00000007086	vars	84	69.634	ENSTSYG00000001567	VARS	50	70.471	Carlito_syrichta
ENSEBUG00000007086	vars	84	69.808	ENSCAPG00000013736	VARS	57	70.780	Cavia_aperea
ENSEBUG00000007086	vars	84	69.459	ENSCPOG00000000870	VARS	53	70.417	Cavia_porcellus
ENSEBUG00000007086	vars	84	69.634	ENSCCAG00000035656	VARS	75	68.981	Cebus_capucinus
ENSEBUG00000007086	vars	72	69.983	ENSCATG00000022394	VARS	75	64.706	Cercocebus_atys
ENSEBUG00000007086	vars	82	69.792	ENSCLAG00000009470	VARS	50	70.909	Chinchilla_lanigera
ENSEBUG00000007086	vars	84	69.983	ENSCSAG00000008784	VARS	50	70.833	Chlorocebus_sabaeus
ENSEBUG00000007086	vars	84	63.955	ENSCPBG00000007943	VARS	66	72.852	Chrysemys_picta_bellii
ENSEBUG00000007086	vars	84	70.157	ENSCANG00000033570	VARS	50	71.143	Colobus_angolensis_palliatus
ENSEBUG00000007086	vars	84	70.681	ENSCGRG00001005686	Vars	50	71.739	Cricetulus_griseus_chok1gshd
ENSEBUG00000007086	vars	82	71.304	ENSCSEG00000019652	vars	52	71.304	Cynoglossus_semilaevis
ENSEBUG00000007086	vars	83	72.444	ENSCVAG00000022398	vars	52	72.444	Cyprinodon_variegatus
ENSEBUG00000007086	vars	84	72.870	ENSDARG00000044575	vars	52	72.870	Danio_rerio
ENSEBUG00000007086	vars	84	69.110	ENSDORG00000016433	Vars	57	70.417	Dipodomys_ordii
ENSEBUG00000007086	vars	84	69.808	ENSEASG00005015673	VARS	51	70.833	Equus_asinus_asinus
ENSEBUG00000007086	vars	84	69.808	ENSECAG00000014620	VARS	51	70.833	Equus_caballus
ENSEBUG00000007086	vars	84	69.459	ENSFCAG00000004510	VARS	50	70.471	Felis_catus
ENSEBUG00000007086	vars	70	69.094	ENSFDAG00000011401	VARS	52	70.849	Fukomys_damarensis
ENSEBUG00000007086	vars	84	72.000	ENSFHEG00000010672	vars	53	71.629	Fundulus_heteroclitus
ENSEBUG00000007086	vars	82	71.750	ENSGMOG00000014908	vars	53	71.750	Gadus_morhua
ENSEBUG00000007086	vars	83	72.270	ENSGAFG00000021630	vars	52	72.270	Gambusia_affinis
ENSEBUG00000007086	vars	82	73.043	ENSGACG00000009601	vars	53	73.043	Gasterosteus_aculeatus
ENSEBUG00000007086	vars	84	69.284	ENSGGOG00000011364	VARS	50	70.109	Gorilla_gorilla
ENSEBUG00000007086	vars	84	69.808	ENSHGLG00000011646	VARS	50	70.962	Heterocephalus_glaber_female
ENSEBUG00000007086	vars	84	63.605	ENSHGLG00100018062	VARS	51	64.610	Heterocephalus_glaber_male
ENSEBUG00000007086	vars	82	73.951	ENSHCOG00000012198	vars	53	73.951	Hippocampus_comes
ENSEBUG00000007086	vars	83	72.000	ENSIPUG00000005218	vars	53	72.000	Ictalurus_punctatus
ENSEBUG00000007086	vars	84	70.157	ENSSTOG00000013112	VARS	50	71.325	Ictidomys_tridecemlineatus
ENSEBUG00000007086	vars	84	68.761	ENSJJAG00000019749	-	50	70.236	Jaculus_jaculus
ENSEBUG00000007086	vars	83	73.647	ENSKMAG00000009455	vars	52	73.647	Kryptolebias_marmoratus
ENSEBUG00000007086	vars	82	73.137	ENSLBEG00000010341	vars	52	72.696	Labrus_bergylta
ENSEBUG00000007086	vars	83	70.299	ENSLAFG00000023090	VARS	50	71.273	Loxodonta_africana
ENSEBUG00000007086	vars	84	69.983	ENSMFAG00000001032	VARS	50	70.833	Macaca_fascicularis
ENSEBUG00000007086	vars	84	69.983	ENSMMUG00000006828	VARS	50	70.833	Macaca_mulatta
ENSEBUG00000007086	vars	84	69.983	ENSMNEG00000042072	VARS	50	70.833	Macaca_nemestrina
ENSEBUG00000007086	vars	84	69.808	ENSMLEG00000039307	VARS	50	70.652	Mandrillus_leucophaeus
ENSEBUG00000007086	vars	82	72.444	ENSMAMG00000003949	vars	52	71.629	Mastacembelus_armatus
ENSEBUG00000007086	vars	81	73.217	ENSMZEG00005018327	vars	54	71.404	Maylandia_zebra
ENSEBUG00000007086	vars	84	70.332	ENSMAUG00000006715	Vars	50	71.377	Mesocricetus_auratus
ENSEBUG00000007086	vars	84	69.459	ENSMICG00000003548	VARS	75	68.056	Microcebus_murinus
ENSEBUG00000007086	vars	84	69.983	ENSMOCG00000015404	Vars	51	71.143	Microtus_ochrogaster
ENSEBUG00000007086	vars	81	72.522	ENSMMOG00000015801	vars	53	72.270	Mola_mola
ENSEBUG00000007086	vars	84	70.906	ENSMODG00000015204	-	50	71.920	Monodelphis_domestica
ENSEBUG00000007086	vars	82	74.177	ENSMALG00000022532	vars	52	73.391	Monopterus_albus
ENSEBUG00000007086	vars	84	70.332	MGP_CAROLIEiJ_G0021491	Vars	51	71.377	Mus_caroli
ENSEBUG00000007086	vars	84	70.157	ENSMUSG00000007029	Vars	50	71.325	Mus_musculus
ENSEBUG00000007086	vars	84	70.105	MGP_PahariEiJ_G0020486	Vars	50	71.273	Mus_pahari
ENSEBUG00000007086	vars	84	70.332	MGP_SPRETEiJ_G0022396	Vars	50	71.506	Mus_spretus
ENSEBUG00000007086	vars	84	69.983	ENSMPUG00000010821	VARS	50	71.014	Mustela_putorius_furo
ENSEBUG00000007086	vars	84	69.634	ENSNGAG00000012151	Vars	50	70.780	Nannospalax_galili
ENSEBUG00000007086	vars	82	72.790	ENSNBRG00000020520	vars	51	73.418	Neolamprologus_brichardi
ENSEBUG00000007086	vars	84	69.284	ENSNLEG00000006351	VARS	75	62.389	Nomascus_leucogenys
ENSEBUG00000007086	vars	84	70.332	ENSMEUG00000011378	VARS	50	71.196	Notamacropus_eugenii
ENSEBUG00000007086	vars	84	69.634	ENSOPRG00000003607	VARS	50	70.471	Ochotona_princeps
ENSEBUG00000007086	vars	84	70.332	ENSODEG00000017681	VARS	51	71.506	Octodon_degus
ENSEBUG00000007086	vars	82	73.310	ENSONIG00000013064	vars	55	73.874	Oreochromis_niloticus
ENSEBUG00000007086	vars	84	69.634	ENSOCUG00000022463	VARS	51	70.599	Oryctolagus_cuniculus
ENSEBUG00000007086	vars	83	73.010	ENSORLG00000013063	vars	51	73.010	Oryzias_latipes
ENSEBUG00000007086	vars	83	73.183	ENSORLG00020003504	vars	52	73.183	Oryzias_latipes_hni
ENSEBUG00000007086	vars	83	73.356	ENSORLG00015009001	vars	52	73.356	Oryzias_latipes_hsok
ENSEBUG00000007086	vars	83	72.790	ENSOMEG00000015016	vars	52	72.790	Oryzias_melastigma
ENSEBUG00000007086	vars	84	69.634	ENSOGAG00000007515	VARS	50	70.599	Otolemur_garnettii
ENSEBUG00000007086	vars	84	69.808	ENSPPAG00000034012	VARS	50	70.780	Pan_paniscus
ENSEBUG00000007086	vars	84	69.634	ENSPPRG00000014855	VARS	50	70.652	Panthera_pardus
ENSEBUG00000007086	vars	72	69.808	ENSPTRG00000017985	VARS	50	70.780	Pan_troglodytes
ENSEBUG00000007086	vars	84	70.157	ENSPANG00000014565	VARS	51	71.143	Papio_anubis
ENSEBUG00000007086	vars	83	72.775	ENSPMGG00000023909	vars	53	72.775	Periophthalmus_magnuspinnatus
ENSEBUG00000007086	vars	84	70.506	ENSPEMG00000006639	Vars	50	71.558	Peromyscus_maniculatus_bairdii
ENSEBUG00000007086	vars	84	71.603	ENSPCIG00000018553	VARS	50	72.464	Phascolarctos_cinereus
ENSEBUG00000007086	vars	83	72.696	ENSPFOG00000015690	vars	52	72.444	Poecilia_formosa
ENSEBUG00000007086	vars	83	72.870	ENSPLAG00000009590	vars	53	72.522	Poecilia_latipinna
ENSEBUG00000007086	vars	83	72.444	ENSPMEG00000004708	vars	52	72.444	Poecilia_mexicana
ENSEBUG00000007086	vars	83	73.124	ENSPREG00000013264	vars	54	73.124	Poecilia_reticulata
ENSEBUG00000007086	vars	84	66.667	ENSPPYG00000016460	VARS	50	67.391	Pongo_abelii
ENSEBUG00000007086	vars	84	70.157	ENSPCOG00000010942	VARS	50	71.143	Propithecus_coquereli
ENSEBUG00000007086	vars	84	68.586	ENSPVAG00000012403	VARS	50	69.510	Pteropus_vampyrus
ENSEBUG00000007086	vars	83	73.693	ENSPNAG00000020962	vars	56	73.693	Pygocentrus_nattereri
ENSEBUG00000007086	vars	84	69.983	ENSRNOG00000000867	Vars	50	71.014	Rattus_norvegicus
ENSEBUG00000007086	vars	84	69.808	ENSRBIG00000041669	VARS	75	64.706	Rhinopithecus_bieti
ENSEBUG00000007086	vars	84	69.808	ENSRROG00000045490	VARS	50	70.652	Rhinopithecus_roxellana
ENSEBUG00000007086	vars	84	69.459	ENSSBOG00000035402	VARS	50	70.471	Saimiri_boliviensis_boliviensis
ENSEBUG00000007086	vars	84	70.855	ENSSHAG00000006937	VARS	50	71.739	Sarcophilus_harrisii
ENSEBUG00000007086	vars	83	71.750	ENSSFOG00015014272	vars	54	72.000	Scleropages_formosus
ENSEBUG00000007086	vars	82	71.577	ENSSMAG00000009596	vars	51	71.577	Scophthalmus_maximus
ENSEBUG00000007086	vars	82	73.484	ENSSDUG00000014177	vars	51	73.484	Seriola_dumerili
ENSEBUG00000007086	vars	82	73.310	ENSSLDG00000025316	vars	51	73.310	Seriola_lalandi_dorsalis
ENSEBUG00000007086	vars	82	73.230	ENSSPAG00000017068	vars	52	72.522	Stegastes_partitus
ENSEBUG00000007086	vars	84	70.332	ENSSSCG00000038950	VARS	50	71.014	Sus_scrofa
ENSEBUG00000007086	vars	66	65.677	ENSTRUG00000012307	vars	51	65.562	Takifugu_rubripes
ENSEBUG00000007086	vars	82	73.657	ENSTNIG00000008011	vars	53	73.739	Tetraodon_nigroviridis
ENSEBUG00000007086	vars	84	70.681	ENSTTRG00000014128	VARS	50	71.506	Tursiops_truncatus
ENSEBUG00000007086	vars	84	66.149	ENSUAMG00000010424	VARS	50	67.269	Ursus_americanus
ENSEBUG00000007086	vars	73	69.903	ENSUMAG00000013486	VARS	52	69.903	Ursus_maritimus
ENSEBUG00000007086	vars	84	69.930	ENSVVUG00000021323	VARS	52	70.856	Vulpes_vulpes
ENSEBUG00000007086	vars	83	69.932	ENSXETG00000024076	vars	51	70.000	Xenopus_tropicalis
ENSEBUG00000007086	vars	83	71.826	ENSXCOG00000019172	vars	53	71.826	Xiphophorus_couchianus
ENSEBUG00000007086	vars	83	72.097	ENSXMAG00000010927	vars	52	72.097	Xiphophorus_maculatus