EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000007307 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 63497 bases
Position: chrFYBX02009999.1:21834-85330
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000011387	RRM_1	PF00076.22	2.7e-27	1	2
ENSEBUP00000011387	RRM_1	PF00076.22	2.7e-27	2	2
ENSEBUP00000011436	RRM_1	PF00076.22	1.2e-26	1	2
ENSEBUP00000011436	RRM_1	PF00076.22	1.2e-26	2	2
ENSEBUP00000011468	RRM_1	PF00076.22	1.2e-26	1	2
ENSEBUP00000011468	RRM_1	PF00076.22	1.2e-26	2	2
ENSEBUP00000011413	RRM_1	PF00076.22	4.5e-19	1	1
ENSEBUP00000011507	RRM_1	PF00076.22	5.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000012078	-	12394	-	ENSEBUP00000011507	3240 (aa)	-	-
ENSEBUT00000011956	-	11621	-	ENSEBUP00000011387	3375 (aa)	-	-
ENSEBUT00000012005	-	11058	-	ENSEBUP00000011436	3237 (aa)	-	-
ENSEBUT00000011982	-	11495	-	ENSEBUP00000011413	3333 (aa)	-	-
ENSEBUT00000012038	-	12239	-	ENSEBUP00000011468	3279 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000007307's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000007307's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000007307	-	56	62.434	ENSHCOG00000006004	si:ch1073-335m2.2	55	64.326	Hippocampus_comes
ENSEBUG00000007307	-	59	67.920	ENSLACG00000003258	SPEN	61	71.910	Latimeria_chalumnae
ENSEBUG00000007307	-	53	74.854	ENSPSIG00000008026	SPEN	58	60.544	Pelodiscus_sinensis
ENSEBUG00000007307	-	54	64.607	ENSSLDG00000023347	si:ch1073-335m2.2	59	64.607	Seriola_lalandi_dorsalis
ENSEBUG00000007307	-	52	48.105	ENSSPUG00000001866	-	53	61.333	Sphenodon_punctatus