EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000007396 (Gene tree)
Gene ID: -
Gene Symbol: rps27a
Alias: hm:zeh0386|ik:tdsubc_1f2|tdsubc_1f2|xx:tdsubc_1f2|zgc:66168
Full Name: ribosomal protein S27a
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 25710 bases
Position: chrFYBX02009646.1:385114-410823
Accession: ZDB-GENE-030131-10018
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000011534	Ribosomal_S27	PF01599.19	6.7e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000012105	-	1973	-	ENSEBUP00000011534	156 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000007396's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000007396's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000007396	rps27a	100	94.231	ENSAPOG00000022780	rps27a	100	94.231	Acanthochromis_polyacanthus
ENSEBUG00000007396	rps27a	100	94.231	ENSAOCG00000000282	rps27a	100	94.231	Amphiprion_ocellaris
ENSEBUG00000007396	rps27a	100	94.231	ENSAPEG00000010300	rps27a	100	94.231	Amphiprion_percula
ENSEBUG00000007396	rps27a	100	93.590	ENSATEG00000021507	rps27a	100	93.590	Anabas_testudineus
ENSEBUG00000007396	rps27a	100	94.231	ENSAMXG00000040689	rps27a	100	94.231	Astyanax_mexicanus
ENSEBUG00000007396	rps27a	76	98.305	ENSCJAG00000046243	-	100	98.305	Callithrix_jacchus
ENSEBUG00000007396	rps27a	100	94.231	ENSTSYG00000000845	-	100	94.231	Carlito_syrichta
ENSEBUG00000007396	rps27a	100	87.179	ENSCING00000005834	r27a	100	87.179	Ciona_intestinalis
ENSEBUG00000007396	rps27a	99	79.221	ENSCSAVG00000001323	-	95	79.221	Ciona_savignyi
ENSEBUG00000007396	rps27a	100	74.359	ENSCGRG00001008358	-	100	73.718	Cricetulus_griseus_chok1gshd
ENSEBUG00000007396	rps27a	100	94.231	ENSCSEG00000001603	rps27a	100	94.231	Cynoglossus_semilaevis
ENSEBUG00000007396	rps27a	100	94.231	ENSCVAG00000004811	rps27a	86	94.231	Cyprinodon_variegatus
ENSEBUG00000007396	rps27a	100	94.231	ENSDARG00000032725	rps27a	100	94.231	Danio_rerio
ENSEBUG00000007396	rps27a	100	89.103	FBgn0003942	RpS27A	100	89.103	Drosophila_melanogaster
ENSEBUG00000007396	rps27a	100	94.231	ENSELUG00000004527	rps27a	100	94.231	Esox_lucius
ENSEBUG00000007396	rps27a	100	94.231	ENSFHEG00000001180	rps27a	100	94.231	Fundulus_heteroclitus
ENSEBUG00000007396	rps27a	100	94.231	ENSGMOG00000011896	rps27a	91	94.231	Gadus_morhua
ENSEBUG00000007396	rps27a	100	94.231	ENSGAFG00000014202	rps27a	100	94.231	Gambusia_affinis
ENSEBUG00000007396	rps27a	100	94.231	ENSGACG00000011558	rps27a	100	94.231	Gasterosteus_aculeatus
ENSEBUG00000007396	rps27a	100	94.231	ENSHBUG00000003375	rps27a	100	94.231	Haplochromis_burtoni
ENSEBUG00000007396	rps27a	100	94.231	ENSHCOG00000019712	rps27a	100	94.231	Hippocampus_comes
ENSEBUG00000007396	rps27a	100	94.231	ENSIPUG00000015317	rps27a	100	94.231	Ictalurus_punctatus
ENSEBUG00000007396	rps27a	100	94.231	ENSKMAG00000003156	rps27a	100	94.231	Kryptolebias_marmoratus
ENSEBUG00000007396	rps27a	100	94.231	ENSLBEG00000000541	rps27a	100	94.231	Labrus_bergylta
ENSEBUG00000007396	rps27a	100	94.872	ENSLACG00000007672	rps27a	100	94.872	Latimeria_chalumnae
ENSEBUG00000007396	rps27a	100	94.231	ENSLOCG00000015551	rps27a	96	94.231	Lepisosteus_oculatus
ENSEBUG00000007396	rps27a	100	93.590	ENSMNEG00000026442	-	100	93.590	Macaca_nemestrina
ENSEBUG00000007396	rps27a	88	95.652	ENSMLEG00000003375	-	100	95.652	Mandrillus_leucophaeus
ENSEBUG00000007396	rps27a	100	94.231	ENSMAMG00000022556	rps27a	100	94.231	Mastacembelus_armatus
ENSEBUG00000007396	rps27a	100	94.231	ENSMZEG00005004484	rps27a	100	94.231	Maylandia_zebra
ENSEBUG00000007396	rps27a	100	93.590	ENSMMOG00000007733	rps27a	100	93.590	Mola_mola
ENSEBUG00000007396	rps27a	100	94.231	ENSMALG00000014759	rps27a	100	94.231	Monopterus_albus
ENSEBUG00000007396	rps27a	100	94.231	ENSNBRG00000010708	rps27a	100	94.231	Neolamprologus_brichardi
ENSEBUG00000007396	rps27a	100	94.231	ENSONIG00000016075	rps27a	96	94.231	Oreochromis_niloticus
ENSEBUG00000007396	rps27a	100	93.590	ENSORLG00000029546	rps27a	100	93.590	Oryzias_latipes
ENSEBUG00000007396	rps27a	100	81.111	ENSORLG00020017665	-	100	81.111	Oryzias_latipes_hni
ENSEBUG00000007396	rps27a	100	93.590	ENSORLG00015003772	rps27a	100	93.590	Oryzias_latipes_hsok
ENSEBUG00000007396	rps27a	100	93.590	ENSOMEG00000022866	rps27a	100	93.590	Oryzias_melastigma
ENSEBUG00000007396	rps27a	92	85.417	ENSOGAG00000029795	-	92	84.722	Otolemur_garnettii
ENSEBUG00000007396	rps27a	100	91.667	ENSOARG00000014935	-	91	90.385	Ovis_aries
ENSEBUG00000007396	rps27a	100	92.949	ENSPPAG00000023609	-	100	92.949	Pan_paniscus
ENSEBUG00000007396	rps27a	100	94.231	ENSPTRG00000023227	-	100	94.231	Pan_troglodytes
ENSEBUG00000007396	rps27a	100	94.872	ENSPKIG00000021492	rps27a	100	94.872	Paramormyrops_kingsleyae
ENSEBUG00000007396	rps27a	78	94.262	ENSPMAG00000006335	-	100	94.262	Petromyzon_marinus
ENSEBUG00000007396	rps27a	100	94.231	ENSPFOG00000013152	rps27a	100	94.231	Poecilia_formosa
ENSEBUG00000007396	rps27a	100	94.231	ENSPLAG00000012639	rps27a	100	94.231	Poecilia_latipinna
ENSEBUG00000007396	rps27a	100	94.231	ENSPMEG00000015419	rps27a	100	94.231	Poecilia_mexicana
ENSEBUG00000007396	rps27a	100	94.231	ENSPREG00000012478	rps27a	100	94.231	Poecilia_reticulata
ENSEBUG00000007396	rps27a	97	93.377	ENSPVAG00000016471	-	100	93.377	Pteropus_vampyrus
ENSEBUG00000007396	rps27a	100	94.231	ENSPNYG00000019989	rps27a	100	94.231	Pundamilia_nyererei
ENSEBUG00000007396	rps27a	100	94.231	ENSPNAG00000002903	rps27a	100	94.231	Pygocentrus_nattereri
ENSEBUG00000007396	rps27a	97	81.457	YLR167W	RPS31	99	81.457	Saccharomyces_cerevisiae
ENSEBUG00000007396	rps27a	99	94.194	ENSSFOG00015017733	rps27a	88	94.194	Scleropages_formosus
ENSEBUG00000007396	rps27a	100	94.231	ENSSMAG00000004941	rps27a	100	94.231	Scophthalmus_maximus
ENSEBUG00000007396	rps27a	100	94.231	ENSSDUG00000003170	rps27a	100	94.231	Seriola_dumerili
ENSEBUG00000007396	rps27a	99	85.065	ENSSLDG00000001310	-	99	85.065	Seriola_lalandi_dorsalis
ENSEBUG00000007396	rps27a	100	94.231	ENSSPAG00000022744	rps27a	100	94.231	Stegastes_partitus
ENSEBUG00000007396	rps27a	100	94.231	ENSTRUG00000010963	rps27a	100	94.231	Takifugu_rubripes
ENSEBUG00000007396	rps27a	90	92.143	ENSTNIG00000018689	rps27a	100	92.143	Tetraodon_nigroviridis
ENSEBUG00000007396	rps27a	100	94.231	ENSXCOG00000003780	rps27a	100	94.231	Xiphophorus_couchianus
ENSEBUG00000007396	rps27a	100	94.231	ENSXMAG00000000171	rps27a	100	94.231	Xiphophorus_maculatus