EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000007485 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 284117 bases
Position: chrFYBX02009566.1:4648055-4932171
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000011860	KH_1	PF00013.29	8.6e-52	1	3
ENSEBUP00000011860	KH_1	PF00013.29	8.6e-52	2	3
ENSEBUP00000011860	KH_1	PF00013.29	8.6e-52	3	3
ENSEBUP00000011682	KH_1	PF00013.29	1.5e-51	1	3
ENSEBUP00000011682	KH_1	PF00013.29	1.5e-51	2	3
ENSEBUP00000011682	KH_1	PF00013.29	1.5e-51	3	3
ENSEBUP00000011793	KH_1	PF00013.29	1.5e-51	1	3
ENSEBUP00000011793	KH_1	PF00013.29	1.5e-51	2	3
ENSEBUP00000011793	KH_1	PF00013.29	1.5e-51	3	3
ENSEBUP00000011829	KH_1	PF00013.29	2.2e-51	1	3
ENSEBUP00000011829	KH_1	PF00013.29	2.2e-51	2	3
ENSEBUP00000011829	KH_1	PF00013.29	2.2e-51	3	3
ENSEBUP00000011705	KH_1	PF00013.29	2.6e-51	1	3
ENSEBUP00000011705	KH_1	PF00013.29	2.6e-51	2	3
ENSEBUP00000011705	KH_1	PF00013.29	2.6e-51	3	3
ENSEBUP00000011773	KH_1	PF00013.29	1.8e-34	1	2
ENSEBUP00000011773	KH_1	PF00013.29	1.8e-34	2	2
ENSEBUP00000011744	KH_1	PF00013.29	3.6e-34	1	2
ENSEBUP00000011744	KH_1	PF00013.29	3.6e-34	2	2
ENSEBUP00000011873	KH_1	PF00013.29	4.1e-34	1	2
ENSEBUP00000011873	KH_1	PF00013.29	4.1e-34	2	2
ENSEBUP00000011725	KH_1	PF00013.29	5.4e-34	1	2
ENSEBUP00000011725	KH_1	PF00013.29	5.4e-34	2	2
ENSEBUP00000011897	KH_1	PF00013.29	6.4e-34	1	2
ENSEBUP00000011897	KH_1	PF00013.29	6.4e-34	2	2
ENSEBUP00000011860	KH_2	PF07650.17	2.6e-15	1	1
ENSEBUP00000011682	KH_2	PF07650.17	4.3e-15	1	1
ENSEBUP00000011793	KH_2	PF07650.17	4.3e-15	1	1
ENSEBUP00000011829	KH_2	PF07650.17	7.2e-15	1	1
ENSEBUP00000011705	KH_2	PF07650.17	8.2e-15	1	1
ENSEBUP00000011773	KH_2	PF07650.17	2.7e-11	1	1
ENSEBUP00000011744	KH_2	PF07650.17	7.5e-11	1	1
ENSEBUP00000011873	KH_2	PF07650.17	1e-10	1	1
ENSEBUP00000011897	KH_2	PF07650.17	1.1e-10	1	1
ENSEBUP00000011725	KH_2	PF07650.17	1.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000012436	-	2003	-	ENSEBUP00000011860	367 (aa)	-	-
ENSEBUT00000012347	-	1294	-	ENSEBUP00000011773	239 (aa)	-	-
ENSEBUT00000012473	-	1520	-	ENSEBUP00000011897	348 (aa)	-	-
ENSEBUT00000012405	-	4837	-	ENSEBUP00000011829	460 (aa)	-	-
ENSEBUT00000012319	-	1700	-	ENSEBUP00000011744	292 (aa)	-	-
ENSEBUT00000012300	-	1776	-	ENSEBUP00000011725	360 (aa)	-	-
ENSEBUT00000012280	-	5273	-	ENSEBUP00000011705	475 (aa)	-	-
ENSEBUT00000012369	-	4940	-	ENSEBUP00000011793	422 (aa)	-	-
ENSEBUT00000012258	-	5368	-	ENSEBUP00000011682	422 (aa)	-	-
ENSEBUT00000012449	-	3744	-	ENSEBUP00000011873	327 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000007485's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000007485's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000007485	-	80	31.373	ENSEBUG00000016201	NOVA1	54	36.620
ENSEBUG00000007485	-	81	31.507	ENSEBUG00000016143	fubp1	51	31.507
ENSEBUG00000007485	-	96	67.965	ENSEBUG00000005495	pcbp3	80	64.338
ENSEBUG00000007485	-	70	33.526	ENSEBUG00000005932	-	78	33.526
ENSEBUG00000007485	-	95	72.489	ENSEBUG00000009697	zgc:110045	99	73.171
ENSEBUG00000007485	-	75	73.381	ENSEBUG00000016192	pcbp3	99	73.408
ENSEBUG00000007485	-	73	40.351	ENSEBUG00000008930	NOVA1	52	40.351
ENSEBUG00000007485	-	69	30.769	ENSEBUG00000012405	NOVA2	56	42.105
ENSEBUG00000007485	-	82	41.259	ENSEBUG00000012796	IGF2BP3	71	39.623
ENSEBUG00000007485	-	66	46.970	ENSEBUG00000001160	hnrnpk	56	45.588

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000007485	-	92	78.082	ENSAPOG00000020003	pcbp3	88	76.324	Acanthochromis_polyacanthus
ENSEBUG00000007485	-	92	82.192	ENSAPOG00000016582	-	98	77.640	Acanthochromis_polyacanthus
ENSEBUG00000007485	-	92	82.805	ENSAMEG00000001697	-	98	74.286	Ailuropoda_melanoleuca
ENSEBUG00000007485	-	92	70.248	ENSACIG00000010933	pcbp3	93	80.105	Amphilophus_citrinellus
ENSEBUG00000007485	-	92	76.549	ENSACIG00000002739	-	98	77.469	Amphilophus_citrinellus
ENSEBUG00000007485	-	92	81.735	ENSAOCG00000008592	-	95	83.621	Amphiprion_ocellaris
ENSEBUG00000007485	-	78	80.749	ENSAOCG00000007806	-	100	77.027	Amphiprion_ocellaris
ENSEBUG00000007485	-	92	79.452	ENSAPEG00000005209	-	97	79.495	Amphiprion_percula
ENSEBUG00000007485	-	92	73.967	ENSAPEG00000008011	pcbp3	95	74.041	Amphiprion_percula
ENSEBUG00000007485	-	92	78.539	ENSATEG00000009833	-	97	78.864	Anabas_testudineus
ENSEBUG00000007485	-	92	70.661	ENSATEG00000015787	-	98	72.948	Anabas_testudineus
ENSEBUG00000007485	-	95	71.600	ENSAPLG00000008951	-	98	63.519	Anas_platyrhynchos
ENSEBUG00000007485	-	92	83.105	ENSAPLG00000002975	-	98	78.852	Anas_platyrhynchos
ENSEBUG00000007485	-	92	74.380	ENSACAG00000009819	-	97	76.991	Anolis_carolinensis
ENSEBUG00000007485	-	92	75.207	ENSACAG00000004607	-	93	77.647	Anolis_carolinensis
ENSEBUG00000007485	-	90	64.336	ENSANAG00000030702	-	100	80.335	Aotus_nancymaae
ENSEBUG00000007485	-	92	82.192	ENSACLG00000003801	-	98	81.388	Astatotilapia_calliptera
ENSEBUG00000007485	-	92	73.554	ENSACLG00000011835	pcbp3	95	73.746	Astatotilapia_calliptera
ENSEBUG00000007485	-	92	77.169	ENSAMXG00000013588	-	97	78.033	Astyanax_mexicanus
ENSEBUG00000007485	-	99	57.974	ENSAMXG00000001760	zgc:110045	99	57.543	Astyanax_mexicanus
ENSEBUG00000007485	-	94	73.600	ENSAMXG00000003440	pcbp3	96	74.631	Astyanax_mexicanus
ENSEBUG00000007485	-	92	82.805	ENSCAFG00020019472	-	82	84.255	Canis_lupus_dingo
ENSEBUG00000007485	-	92	82.805	ENSCSAG00000007440	-	97	77.457	Chlorocebus_sabaeus
ENSEBUG00000007485	-	92	83.105	ENSCPBG00000012151	-	98	77.448	Chrysemys_picta_bellii
ENSEBUG00000007485	-	92	74.793	ENSCPBG00000000733	-	98	66.741	Chrysemys_picta_bellii
ENSEBUG00000007485	-	86	79.024	ENSCSEG00000016984	-	94	70.248	Cynoglossus_semilaevis
ENSEBUG00000007485	-	94	75.446	ENSCSEG00000000822	pcbp3	98	76.452	Cynoglossus_semilaevis
ENSEBUG00000007485	-	92	73.967	ENSCVAG00000014482	pcbp3	95	74.260	Cyprinodon_variegatus
ENSEBUG00000007485	-	94	80.176	ENSCVAG00000005262	-	98	81.073	Cyprinodon_variegatus
ENSEBUG00000007485	-	92	74.793	ENSDARG00000054378	pcbp3	98	76.176	Danio_rerio
ENSEBUG00000007485	-	62	50.228	ENSDARG00000110961	zgc:110045	100	50.685	Danio_rerio
ENSEBUG00000007485	-	92	65.158	ENSETEG00000015988	-	98	70.032	Echinops_telfairi
ENSEBUG00000007485	-	92	78.539	ENSELUG00000003521	pcbp3	94	75.000	Esox_lucius
ENSEBUG00000007485	-	92	82.648	ENSELUG00000001560	-	97	70.085	Esox_lucius
ENSEBUG00000007485	-	92	83.105	ENSFALG00000003949	-	98	82.278	Ficedula_albicollis
ENSEBUG00000007485	-	95	71.600	ENSFALG00000004411	-	98	63.235	Ficedula_albicollis
ENSEBUG00000007485	-	92	78.082	ENSFHEG00000016615	pcbp3	96	76.825	Fundulus_heteroclitus
ENSEBUG00000007485	-	94	77.093	ENSFHEG00000006539	-	97	78.864	Fundulus_heteroclitus
ENSEBUG00000007485	-	92	53.604	ENSGMOG00000008611	-	98	57.447	Gadus_morhua
ENSEBUG00000007485	-	92	72.146	ENSGMOG00000011992	pcbp3	96	68.955	Gadus_morhua
ENSEBUG00000007485	-	92	74.793	ENSGALG00000013155	-	97	76.220	Gallus_gallus
ENSEBUG00000007485	-	92	72.314	ENSGALG00000004394	-	100	81.675	Gallus_gallus
ENSEBUG00000007485	-	92	68.182	ENSGAFG00000011430	pcbp3	95	70.659	Gambusia_affinis
ENSEBUG00000007485	-	92	82.192	ENSGAFG00000010274	-	94	80.892	Gambusia_affinis
ENSEBUG00000007485	-	92	82.648	ENSGACG00000002266	-	98	76.923	Gasterosteus_aculeatus
ENSEBUG00000007485	-	92	69.835	ENSGACG00000014955	-	98	66.852	Gasterosteus_aculeatus
ENSEBUG00000007485	-	78	81.283	ENSGAGG00000000271	-	100	83.333	Gopherus_agassizii
ENSEBUG00000007485	-	80	77.487	ENSGAGG00000006956	-	95	65.587	Gopherus_agassizii
ENSEBUG00000007485	-	92	82.192	ENSHBUG00000021782	-	98	81.388	Haplochromis_burtoni
ENSEBUG00000007485	-	92	77.626	ENSHBUG00000010697	pcbp3	96	78.361	Haplochromis_burtoni
ENSEBUG00000007485	-	80	85.340	ENSHCOG00000006067	-	91	85.340	Hippocampus_comes
ENSEBUG00000007485	-	92	73.967	ENSHCOG00000017868	pcbp3	95	74.481	Hippocampus_comes
ENSEBUG00000007485	-	94	76.652	ENSIPUG00000006238	pcbp3	97	78.549	Ictalurus_punctatus
ENSEBUG00000007485	-	65	46.429	ENSIPUG00000003914	zgc:110045	100	48.131	Ictalurus_punctatus
ENSEBUG00000007485	-	91	82.110	ENSKMAG00000018530	-	94	80.511	Kryptolebias_marmoratus
ENSEBUG00000007485	-	94	72.874	ENSKMAG00000003046	pcbp3	95	74.041	Kryptolebias_marmoratus
ENSEBUG00000007485	-	86	67.081	ENSLBEG00000006542	-	97	66.061	Labrus_bergylta
ENSEBUG00000007485	-	92	78.082	ENSLBEG00000006201	pcbp3	96	76.341	Labrus_bergylta
ENSEBUG00000007485	-	99	63.445	ENSLACG00000010804	zgc:110045	98	62.605	Latimeria_chalumnae
ENSEBUG00000007485	-	86	78.070	ENSLACG00000010386	pcbp3	76	70.994	Latimeria_chalumnae
ENSEBUG00000007485	-	92	82.648	ENSLOCG00000009369	pcbp3	98	76.558	Lepisosteus_oculatus
ENSEBUG00000007485	-	92	72.727	ENSLOCG00000005058	zgc:110045	98	61.975	Lepisosteus_oculatus
ENSEBUG00000007485	-	92	78.082	ENSMAMG00000022336	pcbp3	93	76.752	Mastacembelus_armatus
ENSEBUG00000007485	-	92	78.995	ENSMAMG00000011620	-	97	79.180	Mastacembelus_armatus
ENSEBUG00000007485	-	80	81.152	ENSMZEG00005014882	-	98	69.075	Maylandia_zebra
ENSEBUG00000007485	-	92	70.248	ENSMZEG00005008993	pcbp3	92	80.105	Maylandia_zebra
ENSEBUG00000007485	-	92	67.480	ENSMGAG00000001883	-	96	68.857	Meleagris_gallopavo
ENSEBUG00000007485	-	86	77.632	ENSMGAG00000006794	-	98	64.076	Meleagris_gallopavo
ENSEBUG00000007485	-	92	78.082	ENSMMOG00000005216	-	97	77.918	Mola_mola
ENSEBUG00000007485	-	92	76.923	ENSMMOG00000000730	pcbp3	86	77.346	Mola_mola
ENSEBUG00000007485	-	68	59.459	ENSMODG00000027884	-	94	62.500	Monodelphis_domestica
ENSEBUG00000007485	-	92	70.661	ENSMALG00000000691	pcbp3	93	81.579	Monopterus_albus
ENSEBUG00000007485	-	92	74.667	ENSMPUG00000001779	-	90	71.765	Mustela_putorius_furo
ENSEBUG00000007485	-	92	70.248	ENSNBRG00000016409	-	95	72.024	Neolamprologus_brichardi
ENSEBUG00000007485	-	82	80.000	ENSNBRG00000016714	-	98	71.772	Neolamprologus_brichardi
ENSEBUG00000007485	-	92	72.131	ENSOPRG00000003431	-	96	74.803	Ochotona_princeps
ENSEBUG00000007485	-	92	73.554	ENSONIG00000012122	-	96	70.370	Oreochromis_niloticus
ENSEBUG00000007485	-	92	82.192	ENSONIG00000004611	-	98	81.388	Oreochromis_niloticus
ENSEBUG00000007485	-	92	82.805	ENSOCUG00000002696	-	89	82.278	Oryctolagus_cuniculus
ENSEBUG00000007485	-	92	81.735	ENSORLG00000000059	pcbp3	97	81.046	Oryzias_latipes
ENSEBUG00000007485	-	92	82.192	ENSORLG00000022739	-	98	81.703	Oryzias_latipes
ENSEBUG00000007485	-	92	82.648	ENSORLG00020006124	-	98	82.019	Oryzias_latipes_hni
ENSEBUG00000007485	-	92	81.735	ENSORLG00020012671	pcbp3	95	81.046	Oryzias_latipes_hni
ENSEBUG00000007485	-	92	82.192	ENSORLG00015008051	-	93	81.759	Oryzias_latipes_hsok
ENSEBUG00000007485	-	92	81.735	ENSORLG00015000429	pcbp3	95	81.046	Oryzias_latipes_hsok
ENSEBUG00000007485	-	83	79.293	ENSOMEG00000020811	pcbp3	97	79.298	Oryzias_melastigma
ENSEBUG00000007485	-	92	82.192	ENSOMEG00000020162	-	98	81.703	Oryzias_melastigma
ENSEBUG00000007485	-	92	73.494	ENSOGAG00000008044	-	98	71.547	Otolemur_garnettii
ENSEBUG00000007485	-	92	82.192	ENSPKIG00000019329	pcbp3	97	78.864	Paramormyrops_kingsleyae
ENSEBUG00000007485	-	80	79.058	ENSPKIG00000020913	-	80	79.058	Paramormyrops_kingsleyae
ENSEBUG00000007485	-	92	70.320	ENSPSIG00000014970	-	98	70.060	Pelodiscus_sinensis
ENSEBUG00000007485	-	79	61.892	ENSPSIG00000008350	-	100	62.228	Pelodiscus_sinensis
ENSEBUG00000007485	-	92	73.967	ENSPMGG00000022383	pcbp3	98	71.884	Periophthalmus_magnuspinnatus
ENSEBUG00000007485	-	92	71.364	ENSPMAG00000004551	pcbp3	97	72.492	Petromyzon_marinus
ENSEBUG00000007485	-	82	81.726	ENSPMAG00000004637	-	100	81.726	Petromyzon_marinus
ENSEBUG00000007485	-	93	82.960	ENSPCIG00000028092	-	97	82.960	Phascolarctos_cinereus
ENSEBUG00000007485	-	92	68.033	ENSPLAG00000011449	pcbp3	89	66.017	Poecilia_latipinna
ENSEBUG00000007485	-	92	78.539	ENSPLAG00000004074	-	91	75.988	Poecilia_latipinna
ENSEBUG00000007485	-	92	73.061	ENSPMEG00000021239	pcbp3	98	71.347	Poecilia_mexicana
ENSEBUG00000007485	-	92	74.026	ENSPMEG00000006653	-	98	73.314	Poecilia_mexicana
ENSEBUG00000007485	-	92	75.113	ENSPREG00000015736	pcbp3	97	76.299	Poecilia_reticulata
ENSEBUG00000007485	-	92	80.909	ENSPREG00000020585	-	91	85.024	Poecilia_reticulata
ENSEBUG00000007485	-	92	78.539	ENSPNYG00000013205	-	97	78.864	Pundamilia_nyererei
ENSEBUG00000007485	-	92	77.626	ENSPNYG00000012326	pcbp3	94	77.346	Pundamilia_nyererei
ENSEBUG00000007485	-	92	77.626	ENSPNAG00000008541	-	96	77.451	Pygocentrus_nattereri
ENSEBUG00000007485	-	64	51.835	ENSPNAG00000006838	zgc:110045	100	51.376	Pygocentrus_nattereri
ENSEBUG00000007485	-	92	82.192	ENSPNAG00000015104	pcbp3	98	81.388	Pygocentrus_nattereri
ENSEBUG00000007485	-	92	82.805	ENSRNOG00000001245	Pcbp3	98	82.019	Rattus_norvegicus
ENSEBUG00000007485	-	94	68.436	ENSRBIG00000028177	-	98	68.436	Rhinopithecus_bieti
ENSEBUG00000007485	-	92	82.805	ENSSHAG00000007890	-	98	77.381	Sarcophilus_harrisii
ENSEBUG00000007485	-	92	73.967	ENSSFOG00015014706	pcbp3	95	75.000	Scleropages_formosus
ENSEBUG00000007485	-	92	77.169	ENSSFOG00015007118	-	93	78.689	Scleropages_formosus
ENSEBUG00000007485	-	92	82.648	ENSSFOG00015010205	pcbp3	94	81.150	Scleropages_formosus
ENSEBUG00000007485	-	92	78.082	ENSSMAG00000011929	pcbp3	95	78.431	Scophthalmus_maximus
ENSEBUG00000007485	-	92	82.192	ENSSMAG00000003135	-	98	81.388	Scophthalmus_maximus
ENSEBUG00000007485	-	80	82.199	ENSSDUG00000008502	-	98	73.529	Seriola_dumerili
ENSEBUG00000007485	-	92	70.661	ENSSDUG00000011608	pcbp3	96	72.727	Seriola_dumerili
ENSEBUG00000007485	-	92	70.661	ENSSLDG00000008518	pcbp3	96	72.727	Seriola_lalandi_dorsalis
ENSEBUG00000007485	-	92	82.192	ENSSLDG00000020161	-	94	80.573	Seriola_lalandi_dorsalis
ENSEBUG00000007485	-	89	74.178	ENSSPUG00000013214	-	96	75.166	Sphenodon_punctatus
ENSEBUG00000007485	-	92	57.851	ENSSPAG00000023341	-	94	62.908	Stegastes_partitus
ENSEBUG00000007485	-	78	80.749	ENSSPAG00000004190	-	100	77.365	Stegastes_partitus
ENSEBUG00000007485	-	92	78.182	ENSTGUG00000003316	-	98	74.260	Taeniopygia_guttata
ENSEBUG00000007485	-	92	82.648	ENSTGUG00000008158	-	98	82.965	Taeniopygia_guttata
ENSEBUG00000007485	-	81	81.443	ENSTRUG00000006280	-	92	80.479	Takifugu_rubripes
ENSEBUG00000007485	-	92	74.569	ENSTRUG00000013604	pcbp3	94	76.364	Takifugu_rubripes
ENSEBUG00000007485	-	92	74.180	ENSTTRG00000015075	-	98	71.588	Tursiops_truncatus
ENSEBUG00000007485	-	96	61.134	ENSXETG00000010491	pcbp2	100	62.284	Xenopus_tropicalis
ENSEBUG00000007485	-	92	84.018	ENSXETG00000011483	pcbp1	98	78.338	Xenopus_tropicalis
ENSEBUG00000007485	-	92	73.061	ENSXCOG00000020481	pcbp3	98	71.347	Xiphophorus_couchianus
ENSEBUG00000007485	-	92	82.192	ENSXMAG00000028711	-	95	80.000	Xiphophorus_maculatus
ENSEBUG00000007485	-	92	73.967	ENSXMAG00000008175	pcbp3	95	74.041	Xiphophorus_maculatus