EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000007493 (Gene tree)
Gene ID: -
Gene Symbol: rab11a
Alias: YL8
Full Name: RAB11a%2C member RAS oncogene family
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 62620 bases
Position: chrFYBX02009871.1:6803579-6866198
Accession: ZDB-GENE-041114-53
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000011689	MMR_HSR1	PF01926.23	2.3e-07	1	1
ENSEBUP00000011698	MMR_HSR1	PF01926.23	2.3e-07	1	1
ENSEBUP00000011706	MMR_HSR1	PF01926.23	2.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000012273	-	2343	-	ENSEBUP00000011698	217 (aa)	-	-
ENSEBUT00000012281	-	2420	-	ENSEBUP00000011706	217 (aa)	-	-
ENSEBUT00000012264	-	5597	-	ENSEBUP00000011689	217 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000007493's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000007493's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000007493	rab11a	80	42.857	ENSEBUG00000004971	-	95	38.462
ENSEBUG00000007493	rab11a	99	45.794	ENSEBUG00000015886	-	100	45.794
ENSEBUG00000007493	rab11a	54	30.508	ENSEBUG00000005056	arl4aa	54	30.508
ENSEBUG00000007493	rab11a	94	38.756	ENSEBUG00000004967	rab9b	97	38.756
ENSEBUG00000007493	rab11a	81	34.463	ENSEBUG00000010861	-	70	34.463
ENSEBUG00000007493	rab11a	78	41.420	ENSEBUG00000015845	-	75	41.420
ENSEBUG00000007493	rab11a	58	35.115	ENSEBUG00000008934	rab36	50	35.115
ENSEBUG00000007493	rab11a	76	44.910	ENSEBUG00000006581	rab12	81	44.910
ENSEBUG00000007493	rab11a	69	33.333	ENSEBUG00000004670	hrasb	85	34.568
ENSEBUG00000007493	rab11a	76	33.529	ENSEBUG00000002259	RAB29	81	33.529
ENSEBUG00000007493	rab11a	100	87.615	ENSEBUG00000011775	rab11ba	99	87.317
ENSEBUG00000007493	rab11a	100	77.880	ENSEBUG00000015447	-	100	77.880
ENSEBUG00000007493	rab11a	75	39.053	ENSEBUG00000009003	-	74	39.053
ENSEBUG00000007493	rab11a	94	31.373	ENSEBUG00000000963	-	92	35.758
ENSEBUG00000007493	rab11a	77	37.278	ENSEBUG00000003339	-	80	37.278
ENSEBUG00000007493	rab11a	74	31.677	ENSEBUG00000003784	rhebl1	92	32.000
ENSEBUG00000007493	rab11a	75	38.650	ENSEBUG00000012680	-	68	38.650
ENSEBUG00000007493	rab11a	94	43.627	ENSEBUG00000014794	rab5c	90	43.627
ENSEBUG00000007493	rab11a	54	32.231	ENSEBUG00000004741	arl4cb	57	32.231
ENSEBUG00000007493	rab11a	69	32.667	ENSEBUG00000015012	kras	85	33.951

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000007493	rab11a	100	88.018	ENSG00000103769	RAB11A	100	100.000	Homo_sapiens
ENSEBUG00000007493	rab11a	100	87.097	ENSAPOG00000018256	rab11a	100	87.097	Acanthochromis_polyacanthus
ENSEBUG00000007493	rab11a	100	88.018	ENSAMEG00000003119	RAB11A	84	88.018	Ailuropoda_melanoleuca
ENSEBUG00000007493	rab11a	100	87.097	ENSACIG00000003092	rab11a	100	87.097	Amphilophus_citrinellus
ENSEBUG00000007493	rab11a	100	87.097	ENSAOCG00000020106	rab11a	100	87.097	Amphiprion_ocellaris
ENSEBUG00000007493	rab11a	100	87.097	ENSAPEG00000000075	rab11a	100	87.097	Amphiprion_percula
ENSEBUG00000007493	rab11a	100	87.097	ENSATEG00000022531	rab11a	100	87.097	Anabas_testudineus
ENSEBUG00000007493	rab11a	98	84.977	ENSAPLG00000014962	RAB11A	98	84.977	Anas_platyrhynchos
ENSEBUG00000007493	rab11a	99	87.500	ENSACAG00000004479	RAB11A	99	87.500	Anolis_carolinensis
ENSEBUG00000007493	rab11a	100	88.018	ENSANAG00000008429	RAB11A	100	88.018	Aotus_nancymaae
ENSEBUG00000007493	rab11a	100	87.097	ENSACLG00000001775	rab11a	100	87.097	Astatotilapia_calliptera
ENSEBUG00000007493	rab11a	96	86.730	ENSAMXG00000003155	rab11a	98	86.730	Astyanax_mexicanus
ENSEBUG00000007493	rab11a	100	88.018	ENSBTAG00000018959	RAB11A	100	88.018	Bos_taurus
ENSEBUG00000007493	rab11a	99	68.837	ENSBTAG00000048711	-	97	68.137	Bos_taurus
ENSEBUG00000007493	rab11a	100	88.018	ENSCJAG00000042037	RAB11A	100	88.018	Callithrix_jacchus
ENSEBUG00000007493	rab11a	100	88.018	ENSCAFG00000017255	RAB11A	100	88.018	Canis_familiaris
ENSEBUG00000007493	rab11a	100	88.018	ENSCAFG00020008478	RAB11A	100	88.018	Canis_lupus_dingo
ENSEBUG00000007493	rab11a	100	88.018	ENSCHIG00000012183	-	100	88.018	Capra_hircus
ENSEBUG00000007493	rab11a	100	84.332	ENSTSYG00000031189	RAB11A	97	94.853	Carlito_syrichta
ENSEBUG00000007493	rab11a	100	88.018	ENSCPOG00000037599	RAB11A	100	88.018	Cavia_porcellus
ENSEBUG00000007493	rab11a	100	88.018	ENSCCAG00000021286	RAB11A	100	88.018	Cebus_capucinus
ENSEBUG00000007493	rab11a	100	88.018	ENSCATG00000034739	-	100	88.018	Cercocebus_atys
ENSEBUG00000007493	rab11a	100	88.018	ENSCLAG00000007435	RAB11A	100	88.018	Chinchilla_lanigera
ENSEBUG00000007493	rab11a	100	88.018	ENSCSAG00000013038	RAB11A	100	88.018	Chlorocebus_sabaeus
ENSEBUG00000007493	rab11a	100	88.018	ENSCPBG00000014614	RAB11A	100	88.018	Chrysemys_picta_bellii
ENSEBUG00000007493	rab11a	100	88.018	ENSCANG00000034570	-	95	97.945	Colobus_angolensis_palliatus
ENSEBUG00000007493	rab11a	100	88.018	ENSCGRG00001023313	Rab11a	100	88.018	Cricetulus_griseus_chok1gshd
ENSEBUG00000007493	rab11a	100	88.018	ENSCGRG00000018359	Rab11a	100	88.018	Cricetulus_griseus_crigri
ENSEBUG00000007493	rab11a	100	86.636	ENSCSEG00000007383	rab11a	100	86.636	Cynoglossus_semilaevis
ENSEBUG00000007493	rab11a	100	87.097	ENSCVAG00000013878	rab11a	100	87.097	Cyprinodon_variegatus
ENSEBUG00000007493	rab11a	100	86.636	ENSDARG00000041450	rab11a	100	86.636	Danio_rerio
ENSEBUG00000007493	rab11a	100	88.018	ENSDNOG00000038479	RAB11A	83	88.018	Dasypus_novemcinctus
ENSEBUG00000007493	rab11a	99	82.353	FBgn0015790	Rab11	100	82.353	Drosophila_melanogaster
ENSEBUG00000007493	rab11a	100	86.175	ENSETEG00000004920	RAB11A	99	86.175	Echinops_telfairi
ENSEBUG00000007493	rab11a	100	88.018	ENSEASG00005006431	RAB11A	100	88.018	Equus_asinus_asinus
ENSEBUG00000007493	rab11a	100	88.018	ENSECAG00000023865	RAB11A	88	87.437	Equus_caballus
ENSEBUG00000007493	rab11a	100	86.636	ENSELUG00000002999	rab11a	93	97.778	Esox_lucius
ENSEBUG00000007493	rab11a	100	88.018	ENSFCAG00000030174	RAB11A	100	88.018	Felis_catus
ENSEBUG00000007493	rab11a	97	85.238	ENSFALG00000010052	RAB11A	100	85.238	Ficedula_albicollis
ENSEBUG00000007493	rab11a	96	87.500	ENSFDAG00000021495	RAB11A	96	87.500	Fukomys_damarensis
ENSEBUG00000007493	rab11a	100	87.097	ENSFHEG00000019668	rab11a	100	87.097	Fundulus_heteroclitus
ENSEBUG00000007493	rab11a	100	85.135	ENSGMOG00000004096	-	100	85.135	Gadus_morhua
ENSEBUG00000007493	rab11a	100	84.793	ENSGMOG00000008355	rab11a	99	84.793	Gadus_morhua
ENSEBUG00000007493	rab11a	100	87.558	ENSGALG00000007615	RAB11A	100	87.558	Gallus_gallus
ENSEBUG00000007493	rab11a	100	87.097	ENSGAFG00000016549	rab11a	100	87.097	Gambusia_affinis
ENSEBUG00000007493	rab11a	100	88.018	ENSGAGG00000014814	RAB11A	100	88.018	Gopherus_agassizii
ENSEBUG00000007493	rab11a	100	88.018	ENSGGOG00000014252	RAB11A	100	88.018	Gorilla_gorilla
ENSEBUG00000007493	rab11a	94	85.784	ENSHBUG00000023035	rab11a	88	85.784	Haplochromis_burtoni
ENSEBUG00000007493	rab11a	100	88.018	ENSHGLG00000005396	RAB11A	100	88.018	Heterocephalus_glaber_female
ENSEBUG00000007493	rab11a	94	77.451	ENSHGLG00000006346	-	99	77.451	Heterocephalus_glaber_female
ENSEBUG00000007493	rab11a	94	77.451	ENSHGLG00100015502	-	99	77.451	Heterocephalus_glaber_male
ENSEBUG00000007493	rab11a	100	88.018	ENSHGLG00100011237	RAB11A	100	88.018	Heterocephalus_glaber_male
ENSEBUG00000007493	rab11a	100	87.097	ENSHCOG00000005652	rab11a	100	87.097	Hippocampus_comes
ENSEBUG00000007493	rab11a	100	87.097	ENSIPUG00000021401	Rab11a	100	87.097	Ictalurus_punctatus
ENSEBUG00000007493	rab11a	100	88.018	ENSSTOG00000015255	RAB11A	100	88.018	Ictidomys_tridecemlineatus
ENSEBUG00000007493	rab11a	100	88.018	ENSJJAG00000012036	-	100	88.018	Jaculus_jaculus
ENSEBUG00000007493	rab11a	100	88.018	ENSJJAG00000015445	Rab11a	100	88.018	Jaculus_jaculus
ENSEBUG00000007493	rab11a	100	87.097	ENSKMAG00000011905	rab11a	100	87.097	Kryptolebias_marmoratus
ENSEBUG00000007493	rab11a	100	87.097	ENSLBEG00000026857	rab11a	100	87.097	Labrus_bergylta
ENSEBUG00000007493	rab11a	100	88.018	ENSLACG00000012184	RAB11A	100	88.018	Latimeria_chalumnae
ENSEBUG00000007493	rab11a	100	87.097	ENSLOCG00000013835	rab11a	99	87.097	Lepisosteus_oculatus
ENSEBUG00000007493	rab11a	100	88.018	ENSLAFG00000011418	RAB11A	100	88.018	Loxodonta_africana
ENSEBUG00000007493	rab11a	100	88.018	ENSMFAG00000000699	-	100	88.018	Macaca_fascicularis
ENSEBUG00000007493	rab11a	100	88.018	ENSMMUG00000008006	RAB11A	100	88.018	Macaca_mulatta
ENSEBUG00000007493	rab11a	100	88.018	ENSMNEG00000043040	-	100	88.018	Macaca_nemestrina
ENSEBUG00000007493	rab11a	100	80.645	ENSMLEG00000032505	RAB11A	94	97.945	Mandrillus_leucophaeus
ENSEBUG00000007493	rab11a	100	87.097	ENSMAMG00000017327	rab11a	100	87.097	Mastacembelus_armatus
ENSEBUG00000007493	rab11a	100	87.097	ENSMZEG00005017063	rab11a	100	87.097	Maylandia_zebra
ENSEBUG00000007493	rab11a	96	85.577	ENSMGAG00000009797	RAB11A	100	85.577	Meleagris_gallopavo
ENSEBUG00000007493	rab11a	100	88.018	ENSMAUG00000018551	Rab11a	100	88.018	Mesocricetus_auratus
ENSEBUG00000007493	rab11a	100	88.018	ENSMICG00000041504	RAB11A	100	88.018	Microcebus_murinus
ENSEBUG00000007493	rab11a	100	88.018	ENSMOCG00000021138	Rab11a	100	88.018	Microtus_ochrogaster
ENSEBUG00000007493	rab11a	88	91.623	ENSMMOG00000017423	-	93	98.347	Mola_mola
ENSEBUG00000007493	rab11a	100	88.018	ENSMODG00000009810	RAB11A	100	88.018	Monodelphis_domestica
ENSEBUG00000007493	rab11a	100	87.097	ENSMALG00000003050	rab11a	100	87.097	Monopterus_albus
ENSEBUG00000007493	rab11a	100	88.018	MGP_CAROLIEiJ_G0032346	Rab11a	95	97.945	Mus_caroli
ENSEBUG00000007493	rab11a	100	88.018	ENSMUSG00000004771	Rab11a	95	97.945	Mus_musculus
ENSEBUG00000007493	rab11a	100	88.018	MGP_PahariEiJ_G0015211	Rab11a	95	97.945	Mus_pahari
ENSEBUG00000007493	rab11a	100	88.018	MGP_SPRETEiJ_G0033485	Rab11a	95	97.945	Mus_spretus
ENSEBUG00000007493	rab11a	100	88.018	ENSMPUG00000000387	RAB11A	100	88.018	Mustela_putorius_furo
ENSEBUG00000007493	rab11a	100	88.018	ENSMLUG00000008820	RAB11A	83	88.018	Myotis_lucifugus
ENSEBUG00000007493	rab11a	100	88.018	ENSNGAG00000013726	Rab11a	100	88.018	Nannospalax_galili
ENSEBUG00000007493	rab11a	100	87.097	ENSNBRG00000012893	rab11a	100	87.097	Neolamprologus_brichardi
ENSEBUG00000007493	rab11a	98	84.977	ENSNLEG00000012853	-	94	97.945	Nomascus_leucogenys
ENSEBUG00000007493	rab11a	100	85.253	ENSOPRG00000004681	RAB11A	100	85.253	Ochotona_princeps
ENSEBUG00000007493	rab11a	100	88.018	ENSODEG00000016878	-	100	88.018	Octodon_degus
ENSEBUG00000007493	rab11a	100	87.097	ENSONIG00000015072	RAB11A	100	87.097	Oreochromis_niloticus
ENSEBUG00000007493	rab11a	94	87.255	ENSOANG00000002201	RAB11A	90	87.255	Ornithorhynchus_anatinus
ENSEBUG00000007493	rab11a	100	88.018	ENSOCUG00000014755	RAB11A	100	88.018	Oryctolagus_cuniculus
ENSEBUG00000007493	rab11a	100	87.558	ENSORLG00000018331	RAB11A	100	87.558	Oryzias_latipes
ENSEBUG00000007493	rab11a	100	87.558	ENSORLG00015010257	rab11a	100	87.558	Oryzias_latipes_hsok
ENSEBUG00000007493	rab11a	100	87.558	ENSOMEG00000017467	rab11a	100	87.558	Oryzias_melastigma
ENSEBUG00000007493	rab11a	100	88.018	ENSOGAG00000007642	RAB11A	100	88.018	Otolemur_garnettii
ENSEBUG00000007493	rab11a	100	88.018	ENSOARG00000018084	RAB11A	83	88.018	Ovis_aries
ENSEBUG00000007493	rab11a	100	88.018	ENSPPAG00000030195	-	100	88.018	Pan_paniscus
ENSEBUG00000007493	rab11a	100	88.018	ENSPPRG00000010471	RAB11A	100	88.018	Panthera_pardus
ENSEBUG00000007493	rab11a	100	88.018	ENSPTIG00000021637	RAB11A	100	88.018	Panthera_tigris_altaica
ENSEBUG00000007493	rab11a	100	88.018	ENSPTRG00000044358	-	100	88.018	Pan_troglodytes
ENSEBUG00000007493	rab11a	100	88.018	ENSPANG00000016687	-	100	88.018	Papio_anubis
ENSEBUG00000007493	rab11a	100	87.097	ENSPKIG00000007606	rab11a	100	87.097	Paramormyrops_kingsleyae
ENSEBUG00000007493	rab11a	100	86.636	ENSPKIG00000015102	-	100	86.636	Paramormyrops_kingsleyae
ENSEBUG00000007493	rab11a	97	85.308	ENSPSIG00000011930	RAB11A	97	85.308	Pelodiscus_sinensis
ENSEBUG00000007493	rab11a	100	88.018	ENSPEMG00000021125	-	100	88.018	Peromyscus_maniculatus_bairdii
ENSEBUG00000007493	rab11a	94	87.317	ENSPEMG00000005147	-	98	87.317	Peromyscus_maniculatus_bairdii
ENSEBUG00000007493	rab11a	99	87.442	ENSPCIG00000006878	RAB11A	96	87.442	Phascolarctos_cinereus
ENSEBUG00000007493	rab11a	100	87.097	ENSPFOG00000009284	rab11a	100	87.097	Poecilia_formosa
ENSEBUG00000007493	rab11a	100	87.097	ENSPLAG00000011175	rab11a	100	87.097	Poecilia_latipinna
ENSEBUG00000007493	rab11a	100	87.097	ENSPMEG00000007932	rab11a	100	87.097	Poecilia_mexicana
ENSEBUG00000007493	rab11a	100	87.097	ENSPREG00000009605	rab11a	100	87.097	Poecilia_reticulata
ENSEBUG00000007493	rab11a	100	88.018	ENSPPYG00000006573	RAB11A	100	88.018	Pongo_abelii
ENSEBUG00000007493	rab11a	100	87.558	ENSPCAG00000002640	RAB11A	100	87.558	Procavia_capensis
ENSEBUG00000007493	rab11a	100	83.871	ENSPCOG00000016536	-	100	83.871	Propithecus_coquereli
ENSEBUG00000007493	rab11a	100	88.018	ENSPCOG00000015802	-	100	88.018	Propithecus_coquereli
ENSEBUG00000007493	rab11a	100	87.097	ENSPNYG00000002252	rab11a	100	87.097	Pundamilia_nyererei
ENSEBUG00000007493	rab11a	100	86.636	ENSPNAG00000014863	rab11a	100	86.636	Pygocentrus_nattereri
ENSEBUG00000007493	rab11a	100	88.018	ENSRNOG00000011302	Rab11a	100	88.018	Rattus_norvegicus
ENSEBUG00000007493	rab11a	100	88.018	ENSRBIG00000035649	RAB11A	100	88.018	Rhinopithecus_bieti
ENSEBUG00000007493	rab11a	100	88.018	ENSRROG00000035305	RAB11A	100	88.018	Rhinopithecus_roxellana
ENSEBUG00000007493	rab11a	100	88.018	ENSSBOG00000017326	RAB11A	100	88.018	Saimiri_boliviensis_boliviensis
ENSEBUG00000007493	rab11a	97	84.762	ENSSHAG00000006622	RAB11A	97	84.762	Sarcophilus_harrisii
ENSEBUG00000007493	rab11a	100	85.253	ENSSFOG00015024042	rab11a	100	85.253	Scleropages_formosus
ENSEBUG00000007493	rab11a	100	87.097	ENSSMAG00000004133	rab11a	100	87.097	Scophthalmus_maximus
ENSEBUG00000007493	rab11a	100	87.097	ENSSDUG00000002580	rab11a	100	87.097	Seriola_dumerili
ENSEBUG00000007493	rab11a	100	87.097	ENSSLDG00000009438	rab11a	100	87.097	Seriola_lalandi_dorsalis
ENSEBUG00000007493	rab11a	94	87.255	ENSSPUG00000013698	RAB11A	100	87.255	Sphenodon_punctatus
ENSEBUG00000007493	rab11a	88	86.911	ENSSPAG00000019393	RAB11A	94	86.911	Stegastes_partitus
ENSEBUG00000007493	rab11a	100	88.018	ENSSSCG00000032312	RAB11A	100	88.018	Sus_scrofa
ENSEBUG00000007493	rab11a	100	87.558	ENSTGUG00000009279	RAB11A	100	87.558	Taeniopygia_guttata
ENSEBUG00000007493	rab11a	100	87.097	ENSTRUG00000020792	rab11a	100	87.097	Takifugu_rubripes
ENSEBUG00000007493	rab11a	99	86.111	ENSTTRG00000011885	RAB11A	100	86.111	Tursiops_truncatus
ENSEBUG00000007493	rab11a	95	85.990	ENSUAMG00000026548	RAB11A	98	85.990	Ursus_americanus
ENSEBUG00000007493	rab11a	100	88.018	ENSUMAG00000012273	RAB11A	100	88.018	Ursus_maritimus
ENSEBUG00000007493	rab11a	94	87.192	ENSVPAG00000004556	RAB11A	100	87.192	Vicugna_pacos
ENSEBUG00000007493	rab11a	100	88.018	ENSVVUG00000014435	RAB11A	100	88.018	Vulpes_vulpes
ENSEBUG00000007493	rab11a	100	87.097	ENSXETG00000006639	rab11a	100	87.097	Xenopus_tropicalis
ENSEBUG00000007493	rab11a	100	87.097	ENSXCOG00000001357	rab11a	82	87.097	Xiphophorus_couchianus
ENSEBUG00000007493	rab11a	100	87.097	ENSXMAG00000023732	rab11a	82	87.097	Xiphophorus_maculatus