EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000007531 (Gene tree)
Gene ID: -
Gene Symbol: ybx1
Alias: Y-box binding protein 1|hm:zeh0308|nsep1|wu:fb01g10|wu:fb08c05|wu:fb16e10|wu:fj26c09|yb1|zfY1|zgc:85599
Full Name: Y box binding protein 1
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 116312 bases
Position: chrFYBX02010277.1:3461336-3577647
Accession: ZDB-GENE-000629-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000011774	CSD	PF00313.22	4.4e-26	1	1
ENSEBUP00000011763	CSD	PF00313.22	6.7e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000012338	-	3660	-	ENSEBUP00000011763	371 (aa)	-	-
ENSEBUT00000012349	-	3423	-	ENSEBUP00000011774	292 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000007531's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000007531's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000007531	ybx1	55	50.718	ENSANAG00000038455	-	61	49.038	Aotus_nancymaae
ENSEBUG00000007531	ybx1	71	49.446	ENSCANG00000032054	-	92	46.503	Colobus_angolensis_palliatus
ENSEBUG00000007531	ybx1	54	43.827	ENSDNOG00000049716	-	63	41.063	Dasypus_novemcinctus
ENSEBUG00000007531	ybx1	54	46.012	ENSDNOG00000042304	-	63	45.570	Dasypus_novemcinctus
ENSEBUG00000007531	ybx1	59	42.358	ENSEASG00005006426	-	70	38.062	Equus_asinus_asinus
ENSEBUG00000007531	ybx1	59	52.632	ENSEEUG00000007494	-	50	57.609	Erinaceus_europaeus
ENSEBUG00000007531	ybx1	56	58.896	ENSHGLG00000017026	-	61	52.885	Heterocephalus_glaber_female
ENSEBUG00000007531	ybx1	73	46.014	ENSHGLG00000010998	-	82	43.416	Heterocephalus_glaber_female
ENSEBUG00000007531	ybx1	71	42.963	ENSJJAG00000019196	-	82	40.217	Jaculus_jaculus
ENSEBUG00000007531	ybx1	55	62.346	ENSODEG00000006802	-	63	50.000	Octodon_degus
ENSEBUG00000007531	ybx1	57	54.491	ENSOGAG00000030653	-	60	54.167	Otolemur_garnettii
ENSEBUG00000007531	ybx1	56	59.509	ENSOGAG00000014939	-	61	50.490	Otolemur_garnettii
ENSEBUG00000007531	ybx1	64	54.365	ENSPPAG00000028526	-	76	46.008	Pan_paniscus
ENSEBUG00000007531	ybx1	71	49.643	ENSPTRG00000046217	-	53	58.696	Pan_troglodytes
ENSEBUG00000007531	ybx1	64	53.968	ENSPTRG00000043077	-	76	45.627	Pan_troglodytes
ENSEBUG00000007531	ybx1	71	49.643	ENSPTRG00000052534	-	53	58.696	Pan_troglodytes
ENSEBUG00000007531	ybx1	55	63.354	ENSPANG00000005177	-	67	56.522	Papio_anubis
ENSEBUG00000007531	ybx1	59	54.661	ENSPCOG00000021167	-	85	44.863	Propithecus_coquereli
ENSEBUG00000007531	ybx1	71	49.306	ENSPCOG00000022604	-	52	60.326	Propithecus_coquereli
ENSEBUG00000007531	ybx1	55	61.111	ENSSPAG00000020399	ybx1	58	89.231	Stegastes_partitus