EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000007675 (Gene tree)
Gene ID: -
Gene Symbol: polr2d
Alias: rnap|wu:fa95b11|zgc:110435
Full Name: polymerase (RNA) II (DNA directed) polypeptide D
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 12497 bases
Position: chrFYBX02010277.1:2509230-2521726
Accession: ZDB-GENE-040714-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000012005	RNA_pol_Rpb4	PF03874.16	5.1e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000012581	-	3170	-	ENSEBUP00000012005	142 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000007675's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000007675's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000007675	polr2d	100	92.254	ENSG00000144231	POLR2D	100	97.115	Homo_sapiens
ENSEBUG00000007675	polr2d	100	90.278	ENSAPOG00000023553	polr2d	100	90.278	Acanthochromis_polyacanthus
ENSEBUG00000007675	polr2d	100	90.972	ENSAMEG00000011746	POLR2D	100	90.972	Ailuropoda_melanoleuca
ENSEBUG00000007675	polr2d	100	90.278	ENSAOCG00000007295	polr2d	100	90.278	Amphiprion_ocellaris
ENSEBUG00000007675	polr2d	100	90.278	ENSAPEG00000018714	polr2d	100	90.278	Amphiprion_percula
ENSEBUG00000007675	polr2d	100	89.583	ENSATEG00000020416	polr2d	100	89.583	Anabas_testudineus
ENSEBUG00000007675	polr2d	100	92.254	ENSACAG00000005255	POLR2D	100	92.254	Anolis_carolinensis
ENSEBUG00000007675	polr2d	100	92.254	ENSANAG00000019959	POLR2D	100	92.254	Aotus_nancymaae
ENSEBUG00000007675	polr2d	100	89.583	ENSACLG00000009919	polr2d	100	68.056	Astatotilapia_calliptera
ENSEBUG00000007675	polr2d	93	95.455	ENSAMXG00000008954	polr2d	100	90.909	Astyanax_mexicanus
ENSEBUG00000007675	polr2d	100	92.254	ENSBTAG00000053244	POLR2D	100	92.254	Bos_taurus
ENSEBUG00000007675	polr2d	99	57.639	WBGene00018391	rpb-4	100	57.639	Caenorhabditis_elegans
ENSEBUG00000007675	polr2d	100	92.254	ENSCJAG00000042216	-	100	92.254	Callithrix_jacchus
ENSEBUG00000007675	polr2d	100	91.549	ENSCJAG00000021814	-	100	91.549	Callithrix_jacchus
ENSEBUG00000007675	polr2d	100	92.254	ENSCAFG00000004311	POLR2D	100	92.254	Canis_familiaris
ENSEBUG00000007675	polr2d	100	92.254	ENSCAFG00020003617	POLR2D	100	92.254	Canis_lupus_dingo
ENSEBUG00000007675	polr2d	100	92.254	ENSCHIG00000025995	POLR2D	100	92.254	Capra_hircus
ENSEBUG00000007675	polr2d	82	94.872	ENSTSYG00000036021	POLR2D	100	94.872	Carlito_syrichta
ENSEBUG00000007675	polr2d	100	91.549	ENSCPOG00000002571	POLR2D	100	91.549	Cavia_porcellus
ENSEBUG00000007675	polr2d	100	92.254	ENSCCAG00000037709	POLR2D	100	92.254	Cebus_capucinus
ENSEBUG00000007675	polr2d	100	92.254	ENSCATG00000036749	POLR2D	100	92.254	Cercocebus_atys
ENSEBUG00000007675	polr2d	100	91.549	ENSCLAG00000004449	POLR2D	100	91.549	Chinchilla_lanigera
ENSEBUG00000007675	polr2d	100	92.254	ENSCSAG00000016861	POLR2D	100	92.254	Chlorocebus_sabaeus
ENSEBUG00000007675	polr2d	82	95.726	ENSCHOG00000013850	POLR2D	100	95.726	Choloepus_hoffmanni
ENSEBUG00000007675	polr2d	100	92.958	ENSCPBG00000019132	POLR2D	51	92.958	Chrysemys_picta_bellii
ENSEBUG00000007675	polr2d	90	88.281	ENSCING00000011474	-	96	88.281	Ciona_intestinalis
ENSEBUG00000007675	polr2d	90	88.281	ENSCSAVG00000008353	-	88	88.281	Ciona_savignyi
ENSEBUG00000007675	polr2d	100	92.254	ENSCANG00000043665	POLR2D	100	92.254	Colobus_angolensis_palliatus
ENSEBUG00000007675	polr2d	100	92.254	ENSCGRG00001013608	Polr2d	100	92.254	Cricetulus_griseus_chok1gshd
ENSEBUG00000007675	polr2d	82	95.726	ENSCGRG00000012624	Polr2d	100	95.726	Cricetulus_griseus_crigri
ENSEBUG00000007675	polr2d	99	90.071	ENSCSEG00000006147	polr2d	98	90.071	Cynoglossus_semilaevis
ENSEBUG00000007675	polr2d	100	88.889	ENSCVAG00000000779	polr2d	100	88.889	Cyprinodon_variegatus
ENSEBUG00000007675	polr2d	100	92.958	ENSDARG00000076509	polr2d	100	92.958	Danio_rerio
ENSEBUG00000007675	polr2d	100	92.254	ENSDNOG00000008527	POLR2D	100	92.254	Dasypus_novemcinctus
ENSEBUG00000007675	polr2d	100	92.254	ENSDORG00000026897	Polr2d	100	92.254	Dipodomys_ordii
ENSEBUG00000007675	polr2d	92	80.000	FBgn0263757	Rpb4	94	80.000	Drosophila_melanogaster
ENSEBUG00000007675	polr2d	100	92.254	ENSEASG00005007103	POLR2D	100	92.254	Equus_asinus_asinus
ENSEBUG00000007675	polr2d	100	92.254	ENSECAG00000000556	POLR2D	100	92.254	Equus_caballus
ENSEBUG00000007675	polr2d	99	90.071	ENSELUG00000005928	polr2d	99	90.071	Esox_lucius
ENSEBUG00000007675	polr2d	100	92.254	ENSFCAG00000027816	POLR2D	100	92.254	Felis_catus
ENSEBUG00000007675	polr2d	100	92.254	ENSFALG00000003528	POLR2D	100	92.254	Ficedula_albicollis
ENSEBUG00000007675	polr2d	100	90.845	ENSFDAG00000007217	POLR2D	100	90.845	Fukomys_damarensis
ENSEBUG00000007675	polr2d	100	93.007	ENSGMOG00000001823	polr2d	99	93.007	Gadus_morhua
ENSEBUG00000007675	polr2d	100	92.254	ENSGALG00000002057	POLR2D	100	92.254	Gallus_gallus
ENSEBUG00000007675	polr2d	100	89.583	ENSGAFG00000016932	polr2d	71	89.583	Gambusia_affinis
ENSEBUG00000007675	polr2d	100	88.889	ENSGACG00000004639	polr2d	100	88.889	Gasterosteus_aculeatus
ENSEBUG00000007675	polr2d	100	92.958	ENSGAGG00000021308	POLR2D	100	92.958	Gopherus_agassizii
ENSEBUG00000007675	polr2d	100	92.254	ENSGGOG00000004723	POLR2D	100	92.254	Gorilla_gorilla
ENSEBUG00000007675	polr2d	100	91.549	ENSHGLG00000016570	Polr2d	100	91.549	Heterocephalus_glaber_female
ENSEBUG00000007675	polr2d	100	91.549	ENSHGLG00100013785	Polr2d	100	91.549	Heterocephalus_glaber_male
ENSEBUG00000007675	polr2d	100	87.324	ENSHCOG00000006425	polr2d	100	87.324	Hippocampus_comes
ENSEBUG00000007675	polr2d	100	91.549	ENSIPUG00000011192	polr2d	100	91.549	Ictalurus_punctatus
ENSEBUG00000007675	polr2d	100	90.845	ENSSTOG00000023329	POLR2D	100	90.845	Ictidomys_tridecemlineatus
ENSEBUG00000007675	polr2d	100	83.803	ENSJJAG00000000783	-	100	83.803	Jaculus_jaculus
ENSEBUG00000007675	polr2d	82	89.744	ENSJJAG00000005723	-	94	89.744	Jaculus_jaculus
ENSEBUG00000007675	polr2d	100	92.254	ENSJJAG00000015053	-	100	92.254	Jaculus_jaculus
ENSEBUG00000007675	polr2d	82	94.017	ENSKMAG00000010677	polr2d	66	94.017	Kryptolebias_marmoratus
ENSEBUG00000007675	polr2d	100	93.662	ENSLACG00000017253	POLR2D	100	93.662	Latimeria_chalumnae
ENSEBUG00000007675	polr2d	100	90.278	ENSLOCG00000009106	polr2d	100	90.278	Lepisosteus_oculatus
ENSEBUG00000007675	polr2d	100	92.254	ENSLAFG00000001848	POLR2D	100	92.254	Loxodonta_africana
ENSEBUG00000007675	polr2d	100	92.254	ENSMFAG00000031937	POLR2D	100	92.254	Macaca_fascicularis
ENSEBUG00000007675	polr2d	100	92.254	ENSMMUG00000001989	POLR2D	100	92.254	Macaca_mulatta
ENSEBUG00000007675	polr2d	100	92.254	ENSMNEG00000035505	POLR2D	100	92.254	Macaca_nemestrina
ENSEBUG00000007675	polr2d	100	92.254	ENSMLEG00000035827	POLR2D	100	92.254	Mandrillus_leucophaeus
ENSEBUG00000007675	polr2d	100	92.254	ENSMGAG00000001248	POLR2D	100	92.254	Meleagris_gallopavo
ENSEBUG00000007675	polr2d	100	91.549	ENSMAUG00000014518	Polr2d	100	91.549	Mesocricetus_auratus
ENSEBUG00000007675	polr2d	100	92.254	ENSMICG00000009931	POLR2D	100	92.254	Microcebus_murinus
ENSEBUG00000007675	polr2d	100	89.437	ENSMOCG00000019367	Polr2d	100	89.437	Microtus_ochrogaster
ENSEBUG00000007675	polr2d	100	77.465	ENSMODG00000025028	-	100	77.465	Monodelphis_domestica
ENSEBUG00000007675	polr2d	100	76.761	ENSMODG00000025029	-	100	76.761	Monodelphis_domestica
ENSEBUG00000007675	polr2d	100	77.465	ENSMODG00000025026	-	100	77.465	Monodelphis_domestica
ENSEBUG00000007675	polr2d	100	77.465	ENSMODG00000025030	-	100	77.465	Monodelphis_domestica
ENSEBUG00000007675	polr2d	100	76.761	ENSMODG00000025035	-	100	76.761	Monodelphis_domestica
ENSEBUG00000007675	polr2d	100	76.761	ENSMODG00000025034	-	100	76.761	Monodelphis_domestica
ENSEBUG00000007675	polr2d	100	76.761	ENSMODG00000025036	-	100	76.761	Monodelphis_domestica
ENSEBUG00000007675	polr2d	100	76.761	ENSMODG00000025031	-	100	76.761	Monodelphis_domestica
ENSEBUG00000007675	polr2d	100	76.761	ENSMODG00000025033	-	100	76.761	Monodelphis_domestica
ENSEBUG00000007675	polr2d	100	76.056	ENSMODG00000025032	-	100	76.056	Monodelphis_domestica
ENSEBUG00000007675	polr2d	100	92.958	ENSMODG00000018653	-	100	92.958	Monodelphis_domestica
ENSEBUG00000007675	polr2d	100	77.465	ENSMODG00000025027	-	100	77.465	Monodelphis_domestica
ENSEBUG00000007675	polr2d	100	90.278	ENSMALG00000018266	polr2d	100	90.278	Monopterus_albus
ENSEBUG00000007675	polr2d	100	92.254	MGP_CAROLIEiJ_G0022066	Polr2d	100	92.254	Mus_caroli
ENSEBUG00000007675	polr2d	100	92.254	ENSMUSG00000024258	Polr2d	100	92.254	Mus_musculus
ENSEBUG00000007675	polr2d	100	92.254	MGP_PahariEiJ_G0018800	Polr2d	100	92.254	Mus_pahari
ENSEBUG00000007675	polr2d	100	92.254	MGP_SPRETEiJ_G0022977	Polr2d	100	92.254	Mus_spretus
ENSEBUG00000007675	polr2d	100	92.254	ENSMPUG00000016685	POLR2D	100	92.254	Mustela_putorius_furo
ENSEBUG00000007675	polr2d	83	95.763	ENSMLUG00000006862	POLR2D	100	95.763	Myotis_lucifugus
ENSEBUG00000007675	polr2d	100	92.254	ENSNGAG00000014862	Polr2d	100	92.254	Nannospalax_galili
ENSEBUG00000007675	polr2d	100	92.254	ENSNLEG00000027191	POLR2D	100	92.254	Nomascus_leucogenys
ENSEBUG00000007675	polr2d	82	94.872	ENSOPRG00000005327	POLR2D	100	94.872	Ochotona_princeps
ENSEBUG00000007675	polr2d	100	91.549	ENSODEG00000005262	POLR2D	100	91.549	Octodon_degus
ENSEBUG00000007675	polr2d	100	90.278	ENSONIG00000017290	polr2d	100	90.278	Oreochromis_niloticus
ENSEBUG00000007675	polr2d	83	96.610	ENSOANG00000013216	POLR2D	100	96.610	Ornithorhynchus_anatinus
ENSEBUG00000007675	polr2d	100	90.141	ENSOCUG00000023403	-	100	90.141	Oryctolagus_cuniculus
ENSEBUG00000007675	polr2d	100	85.315	ENSOCUG00000021449	-	100	85.315	Oryctolagus_cuniculus
ENSEBUG00000007675	polr2d	99	87.943	ENSORLG00000005266	polr2d	98	87.943	Oryzias_latipes
ENSEBUG00000007675	polr2d	99	89.437	ENSORLG00020006647	polr2d	99	89.437	Oryzias_latipes_hni
ENSEBUG00000007675	polr2d	99	87.943	ENSORLG00015003222	polr2d	98	87.943	Oryzias_latipes_hsok
ENSEBUG00000007675	polr2d	99	88.652	ENSOMEG00000018915	polr2d	98	88.652	Oryzias_melastigma
ENSEBUG00000007675	polr2d	100	90.972	ENSOGAG00000017118	POLR2D	100	90.972	Otolemur_garnettii
ENSEBUG00000007675	polr2d	100	92.254	ENSOARG00000015995	POLR2D	100	92.254	Ovis_aries
ENSEBUG00000007675	polr2d	100	92.254	ENSPPRG00000020222	POLR2D	100	92.254	Panthera_pardus
ENSEBUG00000007675	polr2d	100	92.254	ENSPTIG00000018618	POLR2D	100	92.254	Panthera_tigris_altaica
ENSEBUG00000007675	polr2d	100	92.254	ENSPTRG00000012436	POLR2D	100	92.254	Pan_troglodytes
ENSEBUG00000007675	polr2d	100	92.254	ENSPANG00000018602	POLR2D	100	92.254	Papio_anubis
ENSEBUG00000007675	polr2d	93	96.212	ENSPKIG00000012166	polr2d	92	96.212	Paramormyrops_kingsleyae
ENSEBUG00000007675	polr2d	83	96.610	ENSPSIG00000002873	POLR2D	100	96.610	Pelodiscus_sinensis
ENSEBUG00000007675	polr2d	100	92.254	ENSPEMG00000018244	Polr2d	100	92.254	Peromyscus_maniculatus_bairdii
ENSEBUG00000007675	polr2d	100	90.845	ENSPMAG00000005021	polr2d	99	90.845	Petromyzon_marinus
ENSEBUG00000007675	polr2d	100	89.583	ENSPFOG00000008969	polr2d	100	89.583	Poecilia_formosa
ENSEBUG00000007675	polr2d	100	89.583	ENSPLAG00000017210	polr2d	100	89.583	Poecilia_latipinna
ENSEBUG00000007675	polr2d	100	89.583	ENSPMEG00000005160	polr2d	100	89.583	Poecilia_mexicana
ENSEBUG00000007675	polr2d	73	96.154	ENSPREG00000021862	polr2d	100	96.154	Poecilia_reticulata
ENSEBUG00000007675	polr2d	100	92.254	ENSPPYG00000012759	POLR2D	100	92.254	Pongo_abelii
ENSEBUG00000007675	polr2d	100	92.254	ENSPCAG00000001396	POLR2D	100	92.254	Procavia_capensis
ENSEBUG00000007675	polr2d	100	92.254	ENSPCOG00000022076	POLR2D	100	92.254	Propithecus_coquereli
ENSEBUG00000007675	polr2d	100	92.254	ENSPVAG00000004002	POLR2D	100	92.254	Pteropus_vampyrus
ENSEBUG00000007675	polr2d	100	92.308	ENSPNAG00000018246	polr2d	100	92.308	Pygocentrus_nattereri
ENSEBUG00000007675	polr2d	100	92.254	ENSRNOG00000016231	Polr2d	100	92.254	Rattus_norvegicus
ENSEBUG00000007675	polr2d	100	92.254	ENSRBIG00000039326	POLR2D	100	92.254	Rhinopithecus_bieti
ENSEBUG00000007675	polr2d	100	92.254	ENSRROG00000023289	POLR2D	100	92.254	Rhinopithecus_roxellana
ENSEBUG00000007675	polr2d	100	92.254	ENSSHAG00000014817	-	100	92.254	Sarcophilus_harrisii
ENSEBUG00000007675	polr2d	93	96.212	ENSSFOG00015024204	polr2d	92	96.212	Scleropages_formosus
ENSEBUG00000007675	polr2d	100	90.278	ENSSDUG00000006060	polr2d	100	90.278	Seriola_dumerili
ENSEBUG00000007675	polr2d	93	94.697	ENSSLDG00000024485	polr2d	100	89.655	Seriola_lalandi_dorsalis
ENSEBUG00000007675	polr2d	82	94.872	ENSSARG00000009037	POLR2D	100	94.872	Sorex_araneus
ENSEBUG00000007675	polr2d	100	92.254	ENSSPUG00000014915	POLR2D	100	92.254	Sphenodon_punctatus
ENSEBUG00000007675	polr2d	100	90.278	ENSSPAG00000013386	polr2d	100	90.278	Stegastes_partitus
ENSEBUG00000007675	polr2d	100	92.254	ENSSSCG00000039230	POLR2D	100	92.254	Sus_scrofa
ENSEBUG00000007675	polr2d	100	92.254	ENSTGUG00000005773	POLR2D	99	92.254	Taeniopygia_guttata
ENSEBUG00000007675	polr2d	100	90.141	ENSTRUG00000004740	polr2d	100	90.141	Takifugu_rubripes
ENSEBUG00000007675	polr2d	100	90.141	ENSTNIG00000011210	polr2d	100	90.141	Tetraodon_nigroviridis
ENSEBUG00000007675	polr2d	82	95.726	ENSTBEG00000006081	POLR2D	100	95.726	Tupaia_belangeri
ENSEBUG00000007675	polr2d	82	95.726	ENSTTRG00000010055	POLR2D	100	95.726	Tursiops_truncatus
ENSEBUG00000007675	polr2d	92	94.615	ENSUAMG00000024374	POLR2D	98	94.615	Ursus_americanus
ENSEBUG00000007675	polr2d	85	95.000	ENSUMAG00000008280	POLR2D	100	97.115	Ursus_maritimus
ENSEBUG00000007675	polr2d	82	95.726	ENSVPAG00000007239	POLR2D	100	95.726	Vicugna_pacos
ENSEBUG00000007675	polr2d	100	92.254	ENSVVUG00000008616	POLR2D	100	92.254	Vulpes_vulpes
ENSEBUG00000007675	polr2d	100	90.141	ENSXETG00000002955	polr2d	100	90.141	Xenopus_tropicalis
ENSEBUG00000007675	polr2d	73	96.154	ENSXCOG00000012668	polr2d	100	96.154	Xiphophorus_couchianus
ENSEBUG00000007675	polr2d	73	96.154	ENSXMAG00000014031	polr2d	100	96.154	Xiphophorus_maculatus