EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000007683 (Gene tree)
Gene ID: -
Gene Symbol: tra2b (1 of many)
Alias: sfrs10|zgc:56612
Full Name: transformer 2 beta homolog
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 34475 bases
Position: chrFYBX02007699.1:1747016-1781490
Accession: ZDB-GENE-040426-1094
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000012027	RRM_1	PF00076.22	6.4e-22	1	1
ENSEBUP00000012018	RRM_1	PF00076.22	7.4e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000012603	-	1149	-	ENSEBUP00000012027	172 (aa)	-	-
ENSEBUT00000012594	-	914	-	ENSEBUP00000012018	161 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000007683's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000007683's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000007683	tra2b	50	32.099	ENSEBUG00000004424	sf3b6	63	31.325

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000007683	tra2b	55	65.169	ENSACIG00000016739	-	51	65.169	Amphilophus_citrinellus
ENSEBUG00000007683	tra2b	50	70.370	ENSATEG00000020354	TRA2B	59	58.879	Anabas_testudineus
ENSEBUG00000007683	tra2b	63	58.879	ENSAMXG00000039469	TRA2B	61	58.879	Astyanax_mexicanus
ENSEBUG00000007683	tra2b	51	69.512	ENSCHIG00000023651	-	50	69.512	Capra_hircus
ENSEBUG00000007683	tra2b	88	46.711	ENSCHIG00000003461	-	56	47.333	Capra_hircus
ENSEBUG00000007683	tra2b	52	68.675	ENSCHIG00000024800	-	52	68.675	Capra_hircus
ENSEBUG00000007683	tra2b	55	62.921	ENSFHEG00000009235	TRA2B	52	62.921	Fundulus_heteroclitus
ENSEBUG00000007683	tra2b	55	65.169	ENSMMOG00000008947	-	54	65.169	Mola_mola
ENSEBUG00000007683	tra2b	50	70.370	ENSTGUG00000017023	-	54	68.675	Taeniopygia_guttata