EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000007875 (Gene tree)
Gene ID: -
Gene Symbol: luc7l3 (1 of many)
Alias: zgc:136380|zgc:158165
Full Name: LUC7-like 3 pre-mRNA splicing factor
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 50529 bases
Position: chrFYBX02010644.1:1657084-1707612
Accession: ZDB-GENE-060616-375
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000012412	LUC7	PF03194.15	1.4e-48	1	1
ENSEBUP00000012366	LUC7	PF03194.15	1.9e-48	1	1
ENSEBUP00000012397	LUC7	PF03194.15	1.9e-47	1	1
ENSEBUP00000012375	LUC7	PF03194.15	2e-44	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000012942	-	1777	-	ENSEBUP00000012366	572 (aa)	-	-
ENSEBUT00000012951	-	4325	-	ENSEBUP00000012375	529 (aa)	-	-
ENSEBUT00000012973	-	4220	-	ENSEBUP00000012397	494 (aa)	-	-
ENSEBUT00000012988	-	3889	-	ENSEBUP00000012412	526 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000007875's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000007875's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000007875	luc7l3	59	42.857	ENSEBUG00000000982	luc7l3	55	46.479

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000007875	luc7l3	51	45.517	ENSANAG00000030274	LUC7L3	70	49.836	Aotus_nancymaae
ENSEBUG00000007875	luc7l3	51	45.517	ENSCATG00000034891	LUC7L3	71	49.836	Cercocebus_atys
ENSEBUG00000007875	luc7l3	51	45.517	ENSGGOG00000024399	LUC7L3	70	49.836	Gorilla_gorilla
ENSEBUG00000007875	luc7l3	55	45.517	ENSHGLG00100014179	LUC7L3	65	39.698	Heterocephalus_glaber_male
ENSEBUG00000007875	luc7l3	51	45.517	ENSMFAG00000031780	LUC7L3	70	49.836	Macaca_fascicularis
ENSEBUG00000007875	luc7l3	55	45.517	ENSMNEG00000005520	LUC7L3	70	49.836	Macaca_nemestrina
ENSEBUG00000007875	luc7l3	52	46.512	ENSNBRG00000006654	luc7l3	79	40.471	Neolamprologus_brichardi
ENSEBUG00000007875	luc7l3	51	45.517	ENSPANG00000022461	LUC7L3	70	49.836	Papio_anubis
ENSEBUG00000007875	luc7l3	51	45.517	ENSPVAG00000013895	LUC7L3	71	49.836	Pteropus_vampyrus
ENSEBUG00000007875	luc7l3	55	45.517	ENSRBIG00000032055	LUC7L3	70	49.836	Rhinopithecus_bieti
ENSEBUG00000007875	luc7l3	55	45.517	ENSRROG00000039925	LUC7L3	70	49.836	Rhinopithecus_roxellana
ENSEBUG00000007875	luc7l3	51	45.517	ENSSBOG00000034373	LUC7L3	70	49.836	Saimiri_boliviensis_boliviensis
ENSEBUG00000007875	luc7l3	52	52.344	ENSSPAG00000020289	luc7l3	71	40.225	Stegastes_partitus