EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000007989 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 21395 bases
Position: chrFYBX02010766.1:1069236-1090630
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000012592	RRM_1	PF00076.22	2.1e-21	1	1
ENSEBUP00000012576	RRM_1	PF00076.22	4.4e-15	1	1
ENSEBUP00000012607	RRM_1	PF00076.22	4.5e-15	1	1
ENSEBUP00000012620	RRM_1	PF00076.22	4.5e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000013178	-	1763	-	ENSEBUP00000012607	281 (aa)	-	-
ENSEBUT00000013196	-	1119	-	ENSEBUP00000012620	281 (aa)	-	-
ENSEBUT00000013152	-	1199	-	ENSEBUP00000012576	314 (aa)	-	-
ENSEBUT00000013169	-	1296	-	ENSEBUP00000012592	431 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000007989's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000007989's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000007989	-	58	54.268	ENSEBUG00000016570	HNRNPA0	60	58.667
ENSEBUG00000007989	-	51	32.381	ENSEBUG00000007562	-	55	32.381

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000007989	-	59	55.249	ENSAPOG00000003688	hnrnpa3	65	58.333	Acanthochromis_polyacanthus
ENSEBUG00000007989	-	57	58.750	ENSAPOG00000003641	hnrnpa3	71	70.588	Acanthochromis_polyacanthus
ENSEBUG00000007989	-	59	48.404	ENSAPOG00000003387	HNRNPA0	74	52.866	Acanthochromis_polyacanthus
ENSEBUG00000007989	-	52	50.610	ENSACIG00000021834	HNRNPA0	90	54.667	Amphilophus_citrinellus
ENSEBUG00000007989	-	59	55.249	ENSAOCG00000004095	hnrnpa3	65	58.333	Amphiprion_ocellaris
ENSEBUG00000007989	-	59	55.249	ENSAPEG00000022522	hnrnpa3	65	58.333	Amphiprion_percula
ENSEBUG00000007989	-	53	42.174	ENSCCAG00000010302	HNRNPA0	60	51.724	Cebus_capucinus
ENSEBUG00000007989	-	57	40.000	ENSCGRG00001005548	Hnrnpa0	58	51.724	Cricetulus_griseus_chok1gshd
ENSEBUG00000007989	-	53	55.128	ENSCGRG00000003686	-	65	62.567	Cricetulus_griseus_crigri
ENSEBUG00000007989	-	59	49.042	ENSCVAG00000018995	hnrnpa3	61	59.615	Cyprinodon_variegatus
ENSEBUG00000007989	-	62	55.429	ENSDARG00000059351	hnrnpa3	90	64.000	Danio_rerio
ENSEBUG00000007989	-	64	50.270	ENSDNOG00000031964	-	63	70.085	Dasypus_novemcinctus
ENSEBUG00000007989	-	56	48.408	ENSETEG00000007747	-	64	56.757	Echinops_telfairi
ENSEBUG00000007989	-	62	54.494	ENSELUG00000023080	hnrnpa3	61	71.429	Esox_lucius
ENSEBUG00000007989	-	53	58.723	ENSGACG00000004477	hnrnpa3	86	50.500	Gasterosteus_aculeatus
ENSEBUG00000007989	-	50	47.727	ENSGAGG00000005632	HNRNPA0	57	51.282	Gopherus_agassizii
ENSEBUG00000007989	-	60	39.286	ENSHGLG00000018216	HNRNPA0	64	47.945	Heterocephalus_glaber_female
ENSEBUG00000007989	-	59	48.193	ENSHGLG00000014577	-	70	59.829	Heterocephalus_glaber_female
ENSEBUG00000007989	-	50	58.108	ENSHGLG00100001336	-	66	50.562	Heterocephalus_glaber_male
ENSEBUG00000007989	-	53	46.154	ENSSTOG00000019374	-	64	42.857	Ictidomys_tridecemlineatus
ENSEBUG00000007989	-	59	55.133	ENSLBEG00000016767	hnrnpa3	71	53.889	Labrus_bergylta
ENSEBUG00000007989	-	58	62.195	ENSMALG00000009691	hnrnpa3	74	71.552	Monopterus_albus
ENSEBUG00000007989	-	60	42.012	MGP_PahariEiJ_G0019657	Hnrnpa0	57	51.724	Mus_pahari
ENSEBUG00000007989	-	59	43.636	ENSMPUG00000019790	HNRNPA0	62	47.945	Mustela_putorius_furo
ENSEBUG00000007989	-	54	42.857	ENSMEUG00000013675	HNRNPA0	65	44.516	Notamacropus_eugenii
ENSEBUG00000007989	-	94	70.940	ENSODEG00000016578	-	73	62.416	Octodon_degus
ENSEBUG00000007989	-	60	56.831	ENSORLG00000017561	hnrnpa3	55	70.588	Oryzias_latipes
ENSEBUG00000007989	-	60	56.831	ENSORLG00020020788	hnrnpa3	55	70.588	Oryzias_latipes_hni
ENSEBUG00000007989	-	84	35.206	ENSORLG00020008203	-	58	47.414	Oryzias_latipes_hni
ENSEBUG00000007989	-	58	38.889	ENSORLG00015016302	HNRNPA0	71	41.975	Oryzias_latipes_hsok
ENSEBUG00000007989	-	69	38.579	ENSORLG00015017144	-	86	30.233	Oryzias_latipes_hsok
ENSEBUG00000007989	-	60	56.831	ENSORLG00015014774	hnrnpa3	52	70.588	Oryzias_latipes_hsok
ENSEBUG00000007989	-	61	36.508	ENSORLG00015016236	HNRNPA0	63	38.889	Oryzias_latipes_hsok
ENSEBUG00000007989	-	52	47.137	ENSPPRG00000014655	HNRNPA0	76	47.458	Panthera_pardus
ENSEBUG00000007989	-	64	59.669	ENSPKIG00000022916	hnrnpa3	73	63.636	Paramormyrops_kingsleyae
ENSEBUG00000007989	-	53	40.606	ENSPEMG00000020274	Hnrnpa0	89	42.672	Peromyscus_maniculatus_bairdii
ENSEBUG00000007989	-	91	40.767	ENSPREG00000005411	hnrnpa3	70	58.750	Poecilia_reticulata
ENSEBUG00000007989	-	63	48.588	ENSPPYG00000012967	-	97	56.863	Pongo_abelii
ENSEBUG00000007989	-	59	56.627	ENSPNYG00000008424	hnrnpa3	74	73.043	Pundamilia_nyererei
ENSEBUG00000007989	-	94	56.410	ENSRROG00000034643	-	74	46.774	Rhinopithecus_roxellana
ENSEBUG00000007989	-	62	57.865	ENSSMAG00000015218	hnrnpa3	64	57.219	Scophthalmus_maximus
ENSEBUG00000007989	-	57	52.514	ENSSPAG00000008969	hnrnpa3	72	57.778	Stegastes_partitus
ENSEBUG00000007989	-	58	47.590	ENSSSCG00000033635	-	67	45.055	Sus_scrofa
ENSEBUG00000007989	-	50	50.000	ENSSSCG00000001098	-	50	44.865	Sus_scrofa
ENSEBUG00000007989	-	58	46.995	ENSSSCG00000040926	-	67	45.055	Sus_scrofa
ENSEBUG00000007989	-	59	44.848	ENSTGUG00000001186	HNRNPA0	76	40.164	Taeniopygia_guttata
ENSEBUG00000007989	-	57	43.902	ENSVVUG00000014736	HNRNPA0	62	47.945	Vulpes_vulpes
ENSEBUG00000007989	-	58	59.608	ENSXETG00000001806	hnrnpa3	73	56.682	Xenopus_tropicalis
ENSEBUG00000007989	-	57	40.000	ENSXMAG00000029150	HNRNPA0	59	48.696	Xiphophorus_maculatus