EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000008020 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: C20orf129|CHICA|dJ616B8.3
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 95747 bases
Position: chrFYBX02010374.1:2503270-2599016
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000012636	FAM83	PF07894.12	1.1e-86	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000013212	-	1524	-	ENSEBUP00000012636	507 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000008020's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000008020's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000008020	-	58	36.000	ENSEBUG00000016357	-	62	36.000
ENSEBUG00000008020	-	54	38.078	ENSEBUG00000010414	FAM83E	55	38.078
ENSEBUG00000008020	-	51	33.210	ENSEBUG00000000653	-	50	33.210

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000008020	-	73	34.726	ENSAPOG00000010249	fam83d	59	37.651	Acanthochromis_polyacanthus
ENSEBUG00000008020	-	62	38.438	ENSACIG00000011115	fam83d	61	38.438	Amphilophus_citrinellus
ENSEBUG00000008020	-	65	37.609	ENSAOCG00000020591	fam83d	61	37.609	Amphiprion_ocellaris
ENSEBUG00000008020	-	65	36.735	ENSAPEG00000023418	fam83d	61	37.609	Amphiprion_percula
ENSEBUG00000008020	-	54	39.721	ENSATEG00000015038	fam83d	51	39.721	Anabas_testudineus
ENSEBUG00000008020	-	63	40.367	ENSACAG00000014274	FAM83D	55	40.367	Anolis_carolinensis
ENSEBUG00000008020	-	56	39.249	ENSACLG00000021027	fam83d	53	39.249	Astatotilapia_calliptera
ENSEBUG00000008020	-	58	42.295	ENSAMXG00000036827	fam83d	54	42.295	Astyanax_mexicanus
ENSEBUG00000008020	-	57	39.465	ENSCHOG00000006804	FAM83D	50	39.465	Choloepus_hoffmanni
ENSEBUG00000008020	-	59	39.355	ENSCGRG00001004084	Fam83d	51	39.355	Cricetulus_griseus_chok1gshd
ENSEBUG00000008020	-	59	39.355	ENSCGRG00000015926	Fam83d	51	39.355	Cricetulus_griseus_crigri
ENSEBUG00000008020	-	55	41.837	ENSCSEG00000009869	fam83d	57	41.837	Cynoglossus_semilaevis
ENSEBUG00000008020	-	68	35.789	ENSCVAG00000001142	fam83d	70	35.789	Cyprinodon_variegatus
ENSEBUG00000008020	-	91	32.017	ENSDARG00000077883	fam83d	86	40.449	Danio_rerio
ENSEBUG00000008020	-	52	45.221	ENSDNOG00000038483	FAM83D	55	41.265	Dasypus_novemcinctus
ENSEBUG00000008020	-	52	41.948	ENSFALG00000005649	-	61	41.948	Ficedula_albicollis
ENSEBUG00000008020	-	54	39.236	ENSFHEG00000002445	fam83d	52	39.236	Fundulus_heteroclitus
ENSEBUG00000008020	-	67	39.710	ENSGALG00000044404	-	60	39.710	Gallus_gallus
ENSEBUG00000008020	-	61	38.053	ENSGAFG00000020121	fam83d	63	38.053	Gambusia_affinis
ENSEBUG00000008020	-	56	39.249	ENSHBUG00000013851	fam83d	53	39.249	Haplochromis_burtoni
ENSEBUG00000008020	-	56	39.932	ENSIPUG00000014706	fam83d	54	39.932	Ictalurus_punctatus
ENSEBUG00000008020	-	52	41.155	ENSKMAG00000021120	fam83d	53	39.792	Kryptolebias_marmoratus
ENSEBUG00000008020	-	62	38.485	ENSLOCG00000004621	fam83d	55	39.873	Lepisosteus_oculatus
ENSEBUG00000008020	-	57	39.465	ENSLAFG00000026634	FAM83D	50	39.465	Loxodonta_africana
ENSEBUG00000008020	-	62	37.654	ENSMAMG00000021041	fam83d	57	38.580	Mastacembelus_armatus
ENSEBUG00000008020	-	56	39.249	ENSMZEG00005010134	fam83d	53	39.249	Maylandia_zebra
ENSEBUG00000008020	-	59	39.677	ENSMOCG00000004363	Fam83d	51	39.677	Microtus_ochrogaster
ENSEBUG00000008020	-	64	36.550	ENSMMOG00000019938	fam83d	66	36.550	Mola_mola
ENSEBUG00000008020	-	54	40.000	ENSMALG00000005956	fam83d	51	41.053	Monopterus_albus
ENSEBUG00000008020	-	55	39.175	ENSNBRG00000023160	fam83d	53	39.175	Neolamprologus_brichardi
ENSEBUG00000008020	-	54	35.192	ENSMEUG00000008016	-	67	35.192	Notamacropus_eugenii
ENSEBUG00000008020	-	56	39.590	ENSONIG00000020301	fam83d	54	39.590	Oreochromis_niloticus
ENSEBUG00000008020	-	52	41.697	ENSORLG00000013925	fam83d	51	41.697	Oryzias_latipes
ENSEBUG00000008020	-	52	41.328	ENSORLG00020019609	fam83d	50	41.328	Oryzias_latipes_hni
ENSEBUG00000008020	-	62	38.750	ENSORLG00015015297	fam83d	58	38.750	Oryzias_latipes_hsok
ENSEBUG00000008020	-	52	41.328	ENSOMEG00000023737	fam83d	51	42.435	Oryzias_melastigma
ENSEBUG00000008020	-	55	39.130	ENSPKIG00000005759	fam83d	56	39.130	Paramormyrops_kingsleyae
ENSEBUG00000008020	-	53	38.351	ENSPKIG00000005834	FAM83D	50	39.785	Paramormyrops_kingsleyae
ENSEBUG00000008020	-	52	43.273	ENSPMGG00000023183	fam83d	53	43.273	Periophthalmus_magnuspinnatus
ENSEBUG00000008020	-	52	42.222	ENSPFOG00000015533	fam83d	50	42.222	Poecilia_formosa
ENSEBUG00000008020	-	57	39.867	ENSPLAG00000019577	fam83d	58	39.867	Poecilia_latipinna
ENSEBUG00000008020	-	66	36.612	ENSPMEG00000022169	fam83d	79	35.459	Poecilia_mexicana
ENSEBUG00000008020	-	61	37.463	ENSPREG00000022272	fam83d	62	37.463	Poecilia_reticulata
ENSEBUG00000008020	-	56	39.249	ENSPNYG00000018750	fam83d	55	39.249	Pundamilia_nyererei
ENSEBUG00000008020	-	56	41.522	ENSPNAG00000009546	fam83d	52	41.522	Pygocentrus_nattereri
ENSEBUG00000008020	-	59	39.677	ENSRNOG00000015794	Fam83d	51	39.677	Rattus_norvegicus
ENSEBUG00000008020	-	54	38.889	ENSSHAG00000015541	FAM83D	50	38.889	Sarcophilus_harrisii
ENSEBUG00000008020	-	52	40.070	ENSSFOG00015020960	fam83d	55	40.070	Scleropages_formosus
ENSEBUG00000008020	-	55	40.278	ENSSFOG00015021806	FAM83D	63	41.343	Scleropages_formosus
ENSEBUG00000008020	-	62	37.812	ENSSMAG00000013878	fam83d	57	37.812	Scophthalmus_maximus
ENSEBUG00000008020	-	62	36.474	ENSSDUG00000019848	fam83d	59	37.386	Seriola_dumerili
ENSEBUG00000008020	-	62	36.474	ENSSLDG00000011509	fam83d	59	37.386	Seriola_lalandi_dorsalis
ENSEBUG00000008020	-	63	36.254	ENSSPAG00000021210	fam83d	58	37.003	Stegastes_partitus
ENSEBUG00000008020	-	59	39.935	ENSSSCG00000007351	FAM83D	52	39.610	Sus_scrofa
ENSEBUG00000008020	-	52	42.264	ENSTGUG00000004606	-	54	42.264	Taeniopygia_guttata
ENSEBUG00000008020	-	52	39.362	ENSTRUG00000023235	fam83d	57	41.135	Takifugu_rubripes
ENSEBUG00000008020	-	52	40.299	ENSTNIG00000007315	fam83d	98	40.299	Tetraodon_nigroviridis
ENSEBUG00000008020	-	65	36.685	ENSXCOG00000017552	fam83d	77	39.009	Xiphophorus_couchianus
ENSEBUG00000008020	-	65	35.946	ENSXMAG00000009595	fam83d	68	35.946	Xiphophorus_maculatus