EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000008075 (Gene tree)
Gene ID: -
Gene Symbol: gfi1ab
Alias: gfi1|gfi1.2|gfi1b
Full Name: growth factor independent 1A transcription repressor b
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 92544 bases
Position: chrFYBX02009313.1:1647366-1739909
Accession: ZDB-GENE-040116-8
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000012702	zf-C2H2	PF00096.26	1.2e-31	1	6
ENSEBUP00000012702	zf-C2H2	PF00096.26	1.2e-31	2	6
ENSEBUP00000012702	zf-C2H2	PF00096.26	1.2e-31	3	6
ENSEBUP00000012702	zf-C2H2	PF00096.26	1.2e-31	4	6
ENSEBUP00000012702	zf-C2H2	PF00096.26	1.2e-31	5	6
ENSEBUP00000012702	zf-C2H2	PF00096.26	1.2e-31	6	6
ENSEBUP00000012702	zf-met	PF12874.7	4.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000013278	-	2209	-	ENSEBUP00000012702	298 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000008075's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000008075's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000008075	gfi1ab	69	43.396	ENSEBUG00000003907	znf366	51	43.396
ENSEBUG00000008075	gfi1ab	60	46.154	ENSEBUG00000016969	-	75	46.154

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000008075	gfi1ab	57	83.529	ENSAMEG00000013858	-	89	83.529	Ailuropoda_melanoleuca
ENSEBUG00000008075	gfi1ab	57	85.294	ENSACIG00000016354	gfi1ab	50	80.851	Amphilophus_citrinellus
ENSEBUG00000008075	gfi1ab	64	78.125	ENSAPLG00000015700	GFI1	55	78.125	Anas_platyrhynchos
ENSEBUG00000008075	gfi1ab	57	83.529	ENSANAG00000019656	GFI1	100	83.529	Aotus_nancymaae
ENSEBUG00000008075	gfi1ab	57	82.407	ENSACLG00000001258	-	88	82.407	Astatotilapia_calliptera
ENSEBUG00000008075	gfi1ab	100	54.908	ENSAMXG00000006669	GFI1	100	54.908	Astyanax_mexicanus
ENSEBUG00000008075	gfi1ab	98	45.820	ENSAMXG00000015228	-	96	45.820	Astyanax_mexicanus
ENSEBUG00000008075	gfi1ab	57	90.265	ENSCAPG00000016268	-	100	90.265	Cavia_aperea
ENSEBUG00000008075	gfi1ab	57	83.529	ENSCCAG00000036072	GFI1	100	83.529	Cebus_capucinus
ENSEBUG00000008075	gfi1ab	57	83.529	ENSCLAG00000005915	GFI1	88	83.529	Chinchilla_lanigera
ENSEBUG00000008075	gfi1ab	56	73.653	ENSCING00000011342	-	88	73.653	Ciona_intestinalis
ENSEBUG00000008075	gfi1ab	56	74.074	ENSCSAVG00000005904	-	100	74.074	Ciona_savignyi
ENSEBUG00000008075	gfi1ab	57	83.529	ENSCGRG00001015432	Gfi1	100	83.529	Cricetulus_griseus_chok1gshd
ENSEBUG00000008075	gfi1ab	69	72.683	ENSCVAG00000004930	GFI1	51	72.683	Cyprinodon_variegatus
ENSEBUG00000008075	gfi1ab	100	79.144	ENSDARG00000044457	gfi1ab	100	79.144	Danio_rerio
ENSEBUG00000008075	gfi1ab	57	84.118	ENSEASG00005015509	GFI1	86	84.118	Equus_asinus_asinus
ENSEBUG00000008075	gfi1ab	57	83.432	ENSEEUG00000000198	GFI1	100	83.432	Erinaceus_europaeus
ENSEBUG00000008075	gfi1ab	70	72.115	ENSELUG00000003015	gfi1ab	51	72.115	Esox_lucius
ENSEBUG00000008075	gfi1ab	69	72.683	ENSFHEG00000000341	GFI1	51	72.683	Fundulus_heteroclitus
ENSEBUG00000008075	gfi1ab	62	79.570	ENSGAFG00000016637	gfi1ab	100	79.570	Gambusia_affinis
ENSEBUG00000008075	gfi1ab	100	55.455	ENSHCOG00000019555	GFI1	100	55.455	Hippocampus_comes
ENSEBUG00000008075	gfi1ab	98	46.926	ENSIPUG00000021407	-	96	46.926	Ictalurus_punctatus
ENSEBUG00000008075	gfi1ab	57	90.265	ENSJJAG00000022622	-	100	90.265	Jaculus_jaculus
ENSEBUG00000008075	gfi1ab	100	49.706	ENSLACG00000017590	-	100	49.706	Latimeria_chalumnae
ENSEBUG00000008075	gfi1ab	62	79.570	ENSMAMG00000008125	gfi1ab	100	79.570	Mastacembelus_armatus
ENSEBUG00000008075	gfi1ab	64	77.604	ENSMGAG00000008187	GFI1	55	77.604	Meleagris_gallopavo
ENSEBUG00000008075	gfi1ab	62	79.032	ENSMMOG00000005556	gfi1ab	50	79.032	Mola_mola
ENSEBUG00000008075	gfi1ab	57	83.529	MGP_CAROLIEiJ_G0027508	Gfi1	100	86.667	Mus_caroli
ENSEBUG00000008075	gfi1ab	57	83.529	ENSMUSG00000029275	Gfi1	100	83.529	Mus_musculus
ENSEBUG00000008075	gfi1ab	57	83.529	MGP_PahariEiJ_G0017280	Gfi1	100	86.667	Mus_pahari
ENSEBUG00000008075	gfi1ab	57	83.529	MGP_SPRETEiJ_G0028507	Gfi1	100	83.529	Mus_spretus
ENSEBUG00000008075	gfi1ab	57	83.529	ENSMPUG00000004178	GFI1	97	50.400	Mustela_putorius_furo
ENSEBUG00000008075	gfi1ab	57	84.118	ENSMLUG00000015191	GFI1	97	84.118	Myotis_lucifugus
ENSEBUG00000008075	gfi1ab	55	77.477	ENSNBRG00000001834	-	87	77.477	Neolamprologus_brichardi
ENSEBUG00000008075	gfi1ab	55	79.646	ENSNBRG00000010351	-	88	79.646	Neolamprologus_brichardi
ENSEBUG00000008075	gfi1ab	57	83.529	ENSOPRG00000001473	GFI1	100	83.529	Ochotona_princeps
ENSEBUG00000008075	gfi1ab	53	85.350	ENSOANG00000022289	-	84	85.350	Ornithorhynchus_anatinus
ENSEBUG00000008075	gfi1ab	100	55.623	ENSORLG00020002817	GFI1	100	55.623	Oryzias_latipes_hni
ENSEBUG00000008075	gfi1ab	57	83.529	ENSOGAG00000027913	GFI1	100	50.275	Otolemur_garnettii
ENSEBUG00000008075	gfi1ab	100	50.409	ENSPPAG00000042186	GFI1	100	50.136	Pan_paniscus
ENSEBUG00000008075	gfi1ab	57	81.395	ENSPTIG00000002680	-	96	81.395	Panthera_tigris_altaica
ENSEBUG00000008075	gfi1ab	99	55.205	ENSPMGG00000011041	GFI1	99	55.205	Periophthalmus_magnuspinnatus
ENSEBUG00000008075	gfi1ab	81	65.339	ENSPMGG00000012546	gfi1ab	65	65.339	Periophthalmus_magnuspinnatus
ENSEBUG00000008075	gfi1ab	62	80.108	ENSPFOG00000023214	gfi1ab	100	80.108	Poecilia_formosa
ENSEBUG00000008075	gfi1ab	100	55.689	ENSPLAG00000010879	gfi1ab	100	80.108	Poecilia_latipinna
ENSEBUG00000008075	gfi1ab	63	78.075	ENSPMEG00000019299	GFI1	50	78.075	Poecilia_mexicana
ENSEBUG00000008075	gfi1ab	100	55.352	ENSPREG00000007997	GFI1	100	55.352	Poecilia_reticulata
ENSEBUG00000008075	gfi1ab	57	84.118	ENSPVAG00000006928	GFI1	100	84.118	Pteropus_vampyrus
ENSEBUG00000008075	gfi1ab	55	82.407	ENSPNYG00000001775	-	88	82.407	Pundamilia_nyererei
ENSEBUG00000008075	gfi1ab	98	45.511	ENSPNAG00000014299	-	98	45.511	Pygocentrus_nattereri
ENSEBUG00000008075	gfi1ab	57	83.529	ENSRNOG00000002042	Gfi1	100	83.529	Rattus_norvegicus
ENSEBUG00000008075	gfi1ab	57	83.529	ENSSBOG00000031300	GFI1	100	83.529	Saimiri_boliviensis_boliviensis
ENSEBUG00000008075	gfi1ab	98	45.714	ENSSFOG00015008114	-	98	45.714	Scleropages_formosus
ENSEBUG00000008075	gfi1ab	55	80.180	ENSSLDG00000017614	-	84	80.180	Seriola_lalandi_dorsalis
ENSEBUG00000008075	gfi1ab	100	56.563	ENSSPAG00000009140	gfi1ab	100	56.740	Stegastes_partitus
ENSEBUG00000008075	gfi1ab	61	78.610	ENSTGUG00000006060	GFI1	54	78.610	Taeniopygia_guttata
ENSEBUG00000008075	gfi1ab	57	83.529	ENSUAMG00000021124	GFI1	91	83.529	Ursus_americanus
ENSEBUG00000008075	gfi1ab	98	78.899	ENSXCOG00000013213	-	97	78.899	Xiphophorus_couchianus
ENSEBUG00000008075	gfi1ab	57	85.586	ENSXCOG00000009186	-	89	85.586	Xiphophorus_couchianus
ENSEBUG00000008075	gfi1ab	62	79.570	ENSXMAG00000010523	gfi1ab	100	79.570	Xiphophorus_maculatus
ENSEBUG00000008075	gfi1ab	98	41.796	ENSXMAG00000006527	-	98	41.796	Xiphophorus_maculatus