EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000008164 (Gene tree)
Gene ID: -
Gene Symbol: exosc1
Alias: -
Full Name: exosome component 1
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 73816 bases
Position: chrFYBX02005852.1:352710-426525
Accession: ZDB-GENE-080926-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000012866	EXOSC1	PF10447.9	8.5e-15	1	1
ENSEBUP00000012876	EXOSC1	PF10447.9	8.5e-15	1	1
ENSEBUP00000012866	ECR1_N	PF14382.6	4.5e-11	1	1
ENSEBUP00000012876	ECR1_N	PF14382.6	4.5e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000013442	-	624	-	ENSEBUP00000012866	198 (aa)	-	-
ENSEBUT00000013452	-	1399	-	ENSEBUP00000012876	198 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000008164's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000008164's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000008164	exosc1	98	62.245	ENSG00000171311	EXOSC1	99	62.245	Homo_sapiens
ENSEBUG00000008164	exosc1	96	66.667	ENSAPOG00000007822	exosc1	97	66.667	Acanthochromis_polyacanthus
ENSEBUG00000008164	exosc1	98	62.755	ENSAMEG00000000129	EXOSC1	99	62.755	Ailuropoda_melanoleuca
ENSEBUG00000008164	exosc1	94	64.706	ENSACIG00000018956	exosc1	90	64.706	Amphilophus_citrinellus
ENSEBUG00000008164	exosc1	96	66.667	ENSAOCG00000010699	exosc1	97	66.667	Amphiprion_ocellaris
ENSEBUG00000008164	exosc1	91	57.692	ENSAPEG00000012690	exosc1	96	57.692	Amphiprion_percula
ENSEBUG00000008164	exosc1	96	66.146	ENSATEG00000018683	exosc1	97	66.146	Anabas_testudineus
ENSEBUG00000008164	exosc1	99	60.606	ENSACAG00000002101	EXOSC1	100	60.606	Anolis_carolinensis
ENSEBUG00000008164	exosc1	98	62.245	ENSANAG00000034669	EXOSC1	99	62.245	Aotus_nancymaae
ENSEBUG00000008164	exosc1	96	65.625	ENSACLG00000021243	exosc1	97	65.625	Astatotilapia_calliptera
ENSEBUG00000008164	exosc1	96	68.229	ENSAMXG00000011116	exosc1	97	68.229	Astyanax_mexicanus
ENSEBUG00000008164	exosc1	98	62.755	ENSBTAG00000012699	EXOSC1	99	62.755	Bos_taurus
ENSEBUG00000008164	exosc1	98	61.735	ENSCJAG00000016586	EXOSC1	99	61.735	Callithrix_jacchus
ENSEBUG00000008164	exosc1	97	63.731	ENSCAFG00000009068	EXOSC1	92	63.731	Canis_familiaris
ENSEBUG00000008164	exosc1	97	63.731	ENSCAFG00020006002	EXOSC1	92	63.731	Canis_lupus_dingo
ENSEBUG00000008164	exosc1	98	62.755	ENSCHIG00000015253	EXOSC1	99	62.755	Capra_hircus
ENSEBUG00000008164	exosc1	98	63.265	ENSTSYG00000000760	EXOSC1	99	63.265	Carlito_syrichta
ENSEBUG00000008164	exosc1	98	62.755	ENSCPOG00000001173	EXOSC1	99	62.755	Cavia_porcellus
ENSEBUG00000008164	exosc1	97	39.691	ENSCCAG00000023986	EXOSC1	97	39.691	Cebus_capucinus
ENSEBUG00000008164	exosc1	98	62.245	ENSCATG00000034114	EXOSC1	99	62.245	Cercocebus_atys
ENSEBUG00000008164	exosc1	98	62.755	ENSCLAG00000002463	EXOSC1	99	62.755	Chinchilla_lanigera
ENSEBUG00000008164	exosc1	98	61.735	ENSCSAG00000005870	EXOSC1	99	61.735	Chlorocebus_sabaeus
ENSEBUG00000008164	exosc1	94	55.851	ENSCHOG00000006477	EXOSC1	99	55.851	Choloepus_hoffmanni
ENSEBUG00000008164	exosc1	56	50.909	ENSCPBG00000011949	EXOSC1	88	50.909	Chrysemys_picta_bellii
ENSEBUG00000008164	exosc1	95	50.794	ENSCING00000022734	-	90	50.794	Ciona_intestinalis
ENSEBUG00000008164	exosc1	95	56.085	ENSCSAVG00000010865	-	96	56.085	Ciona_savignyi
ENSEBUG00000008164	exosc1	98	62.245	ENSCANG00000034159	EXOSC1	99	62.245	Colobus_angolensis_palliatus
ENSEBUG00000008164	exosc1	98	62.245	ENSCGRG00001000335	Exosc1	99	62.245	Cricetulus_griseus_chok1gshd
ENSEBUG00000008164	exosc1	98	62.245	ENSCGRG00000011602	Exosc1	99	62.245	Cricetulus_griseus_crigri
ENSEBUG00000008164	exosc1	96	58.333	ENSCSEG00000007895	exosc1	94	58.333	Cynoglossus_semilaevis
ENSEBUG00000008164	exosc1	96	60.938	ENSCVAG00000016748	exosc1	97	60.938	Cyprinodon_variegatus
ENSEBUG00000008164	exosc1	96	66.667	ENSDARG00000059841	exosc1	97	66.667	Danio_rerio
ENSEBUG00000008164	exosc1	74	55.034	ENSDNOG00000007983	EXOSC1	99	55.034	Dasypus_novemcinctus
ENSEBUG00000008164	exosc1	98	61.735	ENSDORG00000016528	Exosc1	99	61.735	Dipodomys_ordii
ENSEBUG00000008164	exosc1	94	46.875	FBgn0032346	Csl4	92	46.875	Drosophila_melanogaster
ENSEBUG00000008164	exosc1	98	62.755	ENSETEG00000002469	-	99	62.755	Echinops_telfairi
ENSEBUG00000008164	exosc1	97	60.622	ENSEASG00005008684	EXOSC1	97	60.622	Equus_asinus_asinus
ENSEBUG00000008164	exosc1	59	42.735	ENSECAG00000010621	EXOSC1	68	42.735	Equus_caballus
ENSEBUG00000008164	exosc1	98	61.224	ENSEEUG00000005647	EXOSC1	99	61.224	Erinaceus_europaeus
ENSEBUG00000008164	exosc1	95	62.694	ENSELUG00000017369	exosc1	96	52.332	Esox_lucius
ENSEBUG00000008164	exosc1	97	63.212	ENSFCAG00000040563	EXOSC1	99	58.163	Felis_catus
ENSEBUG00000008164	exosc1	98	64.286	ENSFALG00000008450	EXOSC1	99	64.286	Ficedula_albicollis
ENSEBUG00000008164	exosc1	98	62.755	ENSFDAG00000000846	EXOSC1	99	62.755	Fukomys_damarensis
ENSEBUG00000008164	exosc1	96	62.500	ENSFHEG00000009154	exosc1	97	62.500	Fundulus_heteroclitus
ENSEBUG00000008164	exosc1	96	64.062	ENSGMOG00000008993	exosc1	97	64.062	Gadus_morhua
ENSEBUG00000008164	exosc1	98	58.163	ENSGALG00000039917	EXOSC1	100	69.863	Gallus_gallus
ENSEBUG00000008164	exosc1	96	62.500	ENSGAFG00000010265	exosc1	93	62.500	Gambusia_affinis
ENSEBUG00000008164	exosc1	96	64.583	ENSGACG00000018936	exosc1	97	64.583	Gasterosteus_aculeatus
ENSEBUG00000008164	exosc1	98	64.286	ENSGAGG00000019192	EXOSC1	99	64.286	Gopherus_agassizii
ENSEBUG00000008164	exosc1	98	57.653	ENSGGOG00000003099	EXOSC1	99	57.653	Gorilla_gorilla
ENSEBUG00000008164	exosc1	96	65.625	ENSHBUG00000017857	exosc1	97	65.625	Haplochromis_burtoni
ENSEBUG00000008164	exosc1	98	62.755	ENSHGLG00000016927	EXOSC1	99	62.755	Heterocephalus_glaber_female
ENSEBUG00000008164	exosc1	98	62.755	ENSHGLG00100012208	EXOSC1	99	62.755	Heterocephalus_glaber_male
ENSEBUG00000008164	exosc1	96	64.062	ENSHCOG00000019882	exosc1	97	64.062	Hippocampus_comes
ENSEBUG00000008164	exosc1	96	68.750	ENSIPUG00000007685	exosc1	97	68.750	Ictalurus_punctatus
ENSEBUG00000008164	exosc1	61	45.833	ENSSTOG00000029860	-	89	45.833	Ictidomys_tridecemlineatus
ENSEBUG00000008164	exosc1	98	62.755	ENSSTOG00000006615	EXOSC1	99	62.755	Ictidomys_tridecemlineatus
ENSEBUG00000008164	exosc1	98	63.265	ENSJJAG00000013311	Exosc1	99	63.265	Jaculus_jaculus
ENSEBUG00000008164	exosc1	97	64.767	ENSKMAG00000001202	exosc1	80	64.767	Kryptolebias_marmoratus
ENSEBUG00000008164	exosc1	96	66.146	ENSLBEG00000011448	exosc1	97	66.146	Labrus_bergylta
ENSEBUG00000008164	exosc1	96	50.000	ENSLOCG00000003776	exosc1	97	50.000	Lepisosteus_oculatus
ENSEBUG00000008164	exosc1	98	63.265	ENSLAFG00000015983	EXOSC1	99	63.265	Loxodonta_africana
ENSEBUG00000008164	exosc1	98	62.245	ENSMFAG00000001493	EXOSC1	99	62.245	Macaca_fascicularis
ENSEBUG00000008164	exosc1	97	62.694	ENSMMUG00000020028	EXOSC1	99	57.653	Macaca_mulatta
ENSEBUG00000008164	exosc1	98	62.245	ENSMNEG00000029816	EXOSC1	99	62.245	Macaca_nemestrina
ENSEBUG00000008164	exosc1	97	56.995	ENSMLEG00000027643	EXOSC1	97	56.995	Mandrillus_leucophaeus
ENSEBUG00000008164	exosc1	96	67.708	ENSMAMG00000012200	exosc1	97	67.708	Mastacembelus_armatus
ENSEBUG00000008164	exosc1	96	65.625	ENSMZEG00005007042	exosc1	97	65.625	Maylandia_zebra
ENSEBUG00000008164	exosc1	98	57.653	ENSMAUG00000020462	-	99	57.653	Mesocricetus_auratus
ENSEBUG00000008164	exosc1	98	62.245	ENSMICG00000007664	EXOSC1	99	58.163	Microcebus_murinus
ENSEBUG00000008164	exosc1	99	58.883	ENSMOCG00000017124	-	97	58.883	Microtus_ochrogaster
ENSEBUG00000008164	exosc1	98	62.245	ENSMOCG00000006004	-	99	62.245	Microtus_ochrogaster
ENSEBUG00000008164	exosc1	97	48.705	ENSMMOG00000021403	exosc1	97	48.705	Mola_mola
ENSEBUG00000008164	exosc1	98	62.944	ENSMODG00000004213	EXOSC1	99	62.944	Monodelphis_domestica
ENSEBUG00000008164	exosc1	94	65.775	ENSMALG00000007061	exosc1	92	65.775	Monopterus_albus
ENSEBUG00000008164	exosc1	98	61.735	MGP_CAROLIEiJ_G0022959	Exosc1	99	61.735	Mus_caroli
ENSEBUG00000008164	exosc1	98	61.735	ENSMUSG00000034321	Exosc1	99	61.735	Mus_musculus
ENSEBUG00000008164	exosc1	98	62.245	MGP_PahariEiJ_G0014449	Exosc1	99	62.245	Mus_pahari
ENSEBUG00000008164	exosc1	98	61.735	MGP_SPRETEiJ_G0023880	Exosc1	99	61.735	Mus_spretus
ENSEBUG00000008164	exosc1	98	62.755	ENSMPUG00000017044	EXOSC1	99	62.755	Mustela_putorius_furo
ENSEBUG00000008164	exosc1	98	62.245	ENSMLUG00000009228	EXOSC1	99	62.245	Myotis_lucifugus
ENSEBUG00000008164	exosc1	98	63.776	ENSNGAG00000022033	Exosc1	99	63.776	Nannospalax_galili
ENSEBUG00000008164	exosc1	96	51.562	ENSNBRG00000024007	exosc1	96	51.562	Neolamprologus_brichardi
ENSEBUG00000008164	exosc1	98	61.735	ENSNLEG00000013872	EXOSC1	99	61.735	Nomascus_leucogenys
ENSEBUG00000008164	exosc1	59	49.138	ENSMEUG00000002246	EXOSC1	98	49.138	Notamacropus_eugenii
ENSEBUG00000008164	exosc1	98	61.224	ENSOPRG00000005065	EXOSC1	99	61.224	Ochotona_princeps
ENSEBUG00000008164	exosc1	98	63.265	ENSODEG00000016709	EXOSC1	99	63.265	Octodon_degus
ENSEBUG00000008164	exosc1	96	65.625	ENSONIG00000017683	exosc1	97	65.625	Oreochromis_niloticus
ENSEBUG00000008164	exosc1	58	77.391	ENSOANG00000006563	EXOSC1	98	73.387	Ornithorhynchus_anatinus
ENSEBUG00000008164	exosc1	97	58.031	ENSOCUG00000026461	-	97	58.031	Oryctolagus_cuniculus
ENSEBUG00000008164	exosc1	98	61.421	ENSOCUG00000011898	-	99	61.421	Oryctolagus_cuniculus
ENSEBUG00000008164	exosc1	96	61.658	ENSORLG00000011595	exosc1	97	61.658	Oryzias_latipes
ENSEBUG00000008164	exosc1	96	61.658	ENSORLG00020005831	exosc1	97	61.658	Oryzias_latipes_hni
ENSEBUG00000008164	exosc1	96	61.658	ENSORLG00015004317	exosc1	97	61.658	Oryzias_latipes_hsok
ENSEBUG00000008164	exosc1	96	53.125	ENSOMEG00000013907	exosc1	97	53.125	Oryzias_melastigma
ENSEBUG00000008164	exosc1	98	61.735	ENSOGAG00000016259	EXOSC1	99	61.735	Otolemur_garnettii
ENSEBUG00000008164	exosc1	98	62.755	ENSOARG00000010136	EXOSC1	99	62.755	Ovis_aries
ENSEBUG00000008164	exosc1	98	56.566	ENSPPAG00000039842	EXOSC1	99	56.566	Pan_paniscus
ENSEBUG00000008164	exosc1	98	62.755	ENSPPRG00000023366	EXOSC1	99	62.755	Panthera_pardus
ENSEBUG00000008164	exosc1	98	62.755	ENSPTIG00000017701	EXOSC1	99	62.755	Panthera_tigris_altaica
ENSEBUG00000008164	exosc1	98	62.245	ENSPTRG00000002808	EXOSC1	99	62.245	Pan_troglodytes
ENSEBUG00000008164	exosc1	98	62.245	ENSPANG00000021324	EXOSC1	99	62.245	Papio_anubis
ENSEBUG00000008164	exosc1	96	68.229	ENSPKIG00000016037	exosc1	97	68.229	Paramormyrops_kingsleyae
ENSEBUG00000008164	exosc1	91	54.255	ENSPSIG00000013571	EXOSC1	98	68.852	Pelodiscus_sinensis
ENSEBUG00000008164	exosc1	96	58.854	ENSPMGG00000014002	exosc1	97	58.854	Periophthalmus_magnuspinnatus
ENSEBUG00000008164	exosc1	98	62.245	ENSPEMG00000010710	-	99	62.245	Peromyscus_maniculatus_bairdii
ENSEBUG00000008164	exosc1	97	69.948	ENSPMAG00000000195	exosc1	98	69.948	Petromyzon_marinus
ENSEBUG00000008164	exosc1	98	62.245	ENSPCIG00000002210	EXOSC1	98	62.245	Phascolarctos_cinereus
ENSEBUG00000008164	exosc1	96	61.979	ENSPFOG00000006755	exosc1	93	61.979	Poecilia_formosa
ENSEBUG00000008164	exosc1	96	61.979	ENSPLAG00000005880	exosc1	97	61.979	Poecilia_latipinna
ENSEBUG00000008164	exosc1	96	61.979	ENSPMEG00000015598	exosc1	93	61.979	Poecilia_mexicana
ENSEBUG00000008164	exosc1	96	55.729	ENSPREG00000000405	exosc1	92	55.729	Poecilia_reticulata
ENSEBUG00000008164	exosc1	98	62.245	ENSPPYG00000002531	EXOSC1	99	62.245	Pongo_abelii
ENSEBUG00000008164	exosc1	98	62.755	ENSPCAG00000009135	EXOSC1	99	62.755	Procavia_capensis
ENSEBUG00000008164	exosc1	98	56.122	ENSPCOG00000027539	EXOSC1	99	56.122	Propithecus_coquereli
ENSEBUG00000008164	exosc1	98	62.245	ENSPVAG00000003372	EXOSC1	99	62.245	Pteropus_vampyrus
ENSEBUG00000008164	exosc1	96	65.625	ENSPNYG00000021745	exosc1	97	65.625	Pundamilia_nyererei
ENSEBUG00000008164	exosc1	96	68.750	ENSPNAG00000001944	exosc1	97	68.750	Pygocentrus_nattereri
ENSEBUG00000008164	exosc1	98	62.245	ENSRNOG00000048708	Exosc1	99	62.245	Rattus_norvegicus
ENSEBUG00000008164	exosc1	98	62.245	ENSRBIG00000035618	EXOSC1	99	62.245	Rhinopithecus_bieti
ENSEBUG00000008164	exosc1	98	62.245	ENSRROG00000032589	EXOSC1	99	57.653	Rhinopithecus_roxellana
ENSEBUG00000008164	exosc1	98	62.245	ENSSBOG00000000359	EXOSC1	99	62.245	Saimiri_boliviensis_boliviensis
ENSEBUG00000008164	exosc1	73	68.027	ENSSHAG00000018219	EXOSC1	100	68.027	Sarcophilus_harrisii
ENSEBUG00000008164	exosc1	96	64.583	ENSSFOG00015016289	-	97	64.583	Scleropages_formosus
ENSEBUG00000008164	exosc1	96	65.625	ENSSFOG00015009069	exosc1	97	65.625	Scleropages_formosus
ENSEBUG00000008164	exosc1	96	65.625	ENSSMAG00000003721	exosc1	97	65.625	Scophthalmus_maximus
ENSEBUG00000008164	exosc1	96	64.583	ENSSDUG00000002993	exosc1	97	64.583	Seriola_dumerili
ENSEBUG00000008164	exosc1	96	64.583	ENSSLDG00000025181	exosc1	97	64.583	Seriola_lalandi_dorsalis
ENSEBUG00000008164	exosc1	98	57.653	ENSSARG00000000162	EXOSC1	99	57.653	Sorex_araneus
ENSEBUG00000008164	exosc1	96	62.694	ENSSPUG00000012263	EXOSC1	97	62.694	Sphenodon_punctatus
ENSEBUG00000008164	exosc1	96	59.375	ENSSPAG00000016792	exosc1	81	59.375	Stegastes_partitus
ENSEBUG00000008164	exosc1	98	62.755	ENSSSCG00000010518	EXOSC1	90	62.755	Sus_scrofa
ENSEBUG00000008164	exosc1	96	65.445	ENSTGUG00000009692	EXOSC1	97	65.445	Taeniopygia_guttata
ENSEBUG00000008164	exosc1	96	61.458	ENSTRUG00000007706	exosc1	98	61.458	Takifugu_rubripes
ENSEBUG00000008164	exosc1	96	60.513	ENSTNIG00000014079	exosc1	97	60.513	Tetraodon_nigroviridis
ENSEBUG00000008164	exosc1	98	60.204	ENSTBEG00000006011	EXOSC1	99	60.204	Tupaia_belangeri
ENSEBUG00000008164	exosc1	94	63.636	ENSTTRG00000009887	EXOSC1	100	63.636	Tursiops_truncatus
ENSEBUG00000008164	exosc1	97	52.332	ENSUAMG00000010266	EXOSC1	97	52.332	Ursus_americanus
ENSEBUG00000008164	exosc1	97	52.332	ENSUMAG00000022002	EXOSC1	97	52.332	Ursus_maritimus
ENSEBUG00000008164	exosc1	97	63.731	ENSVVUG00000023192	EXOSC1	61	63.731	Vulpes_vulpes
ENSEBUG00000008164	exosc1	97	67.010	ENSXETG00000003434	exosc1	98	67.010	Xenopus_tropicalis
ENSEBUG00000008164	exosc1	60	69.167	ENSXCOG00000014499	exosc1	92	69.167	Xiphophorus_couchianus
ENSEBUG00000008164	exosc1	96	55.729	ENSXMAG00000023382	exosc1	92	55.729	Xiphophorus_maculatus