EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000008253 (Gene tree)
Gene ID: -
Gene Symbol: alyref (1 of many)
Alias: tho4|thoc4|zgc:171753
Full Name: Aly/REF export factor
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 16481 bases
Position: chrFYBX02010632.1:296445-312925
Accession: ZDB-GENE-070928-29
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000013041	RRM_1	PF00076.22	1.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000013617	-	774	-	ENSEBUP00000013041	257 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000008253's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000008253's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000008253	alyref	66	39.894	ENSEBUG00000006305	alyref	99	38.258

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000008253	alyref	95	47.860	ENSAPOG00000000183	-	98	46.693	Acanthochromis_polyacanthus
ENSEBUG00000008253	alyref	95	38.966	ENSACIG00000020351	-	99	43.972	Amphilophus_citrinellus
ENSEBUG00000008253	alyref	95	46.863	ENSACIG00000006351	alyref	98	51.103	Amphilophus_citrinellus
ENSEBUG00000008253	alyref	95	48.699	ENSAOCG00000014012	alyref	99	50.929	Amphiprion_ocellaris
ENSEBUG00000008253	alyref	95	46.067	ENSAOCG00000019305	-	98	47.266	Amphiprion_ocellaris
ENSEBUG00000008253	alyref	95	45.896	ENSAPEG00000013527	-	98	46.875	Amphiprion_percula
ENSEBUG00000008253	alyref	96	48.708	ENSAPEG00000014603	alyref	99	50.929	Amphiprion_percula
ENSEBUG00000008253	alyref	95	47.273	ENSATEG00000004307	alyref	99	49.818	Anabas_testudineus
ENSEBUG00000008253	alyref	94	45.055	ENSATEG00000000382	-	97	47.126	Anabas_testudineus
ENSEBUG00000008253	alyref	50	57.554	ENSAPLG00000014745	-	99	58.088	Anas_platyrhynchos
ENSEBUG00000008253	alyref	95	50.000	ENSACLG00000008432	alyref	99	51.111	Astatotilapia_calliptera
ENSEBUG00000008253	alyref	96	41.489	ENSACLG00000010184	-	98	46.667	Astatotilapia_calliptera
ENSEBUG00000008253	alyref	95	48.375	ENSAMXG00000007359	alyref	99	50.181	Astyanax_mexicanus
ENSEBUG00000008253	alyref	66	49.730	ENSCING00000013568	-	68	52.128	Ciona_intestinalis
ENSEBUG00000008253	alyref	66	49.721	ENSCSAVG00000003324	-	99	45.525	Ciona_savignyi
ENSEBUG00000008253	alyref	95	49.438	ENSCSEG00000017800	alyref	99	51.311	Cynoglossus_semilaevis
ENSEBUG00000008253	alyref	95	43.182	ENSCVAG00000007789	-	98	44.231	Cyprinodon_variegatus
ENSEBUG00000008253	alyref	95	50.189	ENSCVAG00000014869	alyref	99	55.849	Cyprinodon_variegatus
ENSEBUG00000008253	alyref	95	51.601	ENSDARG00000077732	alyref	99	52.708	Danio_rerio
ENSEBUG00000008253	alyref	93	42.701	FBgn0010774	Ref1	98	38.007	Drosophila_melanogaster
ENSEBUG00000008253	alyref	95	45.548	ENSELUG00000008849	-	99	47.985	Esox_lucius
ENSEBUG00000008253	alyref	95	51.301	ENSELUG00000017178	alyref	99	52.985	Esox_lucius
ENSEBUG00000008253	alyref	58	62.264	ENSFALG00000011923	-	97	62.821	Ficedula_albicollis
ENSEBUG00000008253	alyref	95	42.424	ENSFHEG00000004698	-	98	44.574	Fundulus_heteroclitus
ENSEBUG00000008253	alyref	95	50.379	ENSFHEG00000019426	alyref	99	52.273	Fundulus_heteroclitus
ENSEBUG00000008253	alyref	65	48.969	ENSGMOG00000013122	-	100	51.596	Gadus_morhua
ENSEBUG00000008253	alyref	95	49.808	ENSGMOG00000009882	alyref	99	51.341	Gadus_morhua
ENSEBUG00000008253	alyref	95	43.750	ENSGAFG00000007573	-	97	40.769	Gambusia_affinis
ENSEBUG00000008253	alyref	95	51.292	ENSGAFG00000006014	alyref	99	53.184	Gambusia_affinis
ENSEBUG00000008253	alyref	95	50.000	ENSHBUG00000020196	alyref	99	51.111	Haplochromis_burtoni
ENSEBUG00000008253	alyref	96	41.404	ENSHBUG00000001454	-	98	47.232	Haplochromis_burtoni
ENSEBUG00000008253	alyref	99	41.608	ENSHCOG00000012825	-	95	44.776	Hippocampus_comes
ENSEBUG00000008253	alyref	95	51.321	ENSIPUG00000009469	alyref	98	50.575	Ictalurus_punctatus
ENSEBUG00000008253	alyref	68	57.923	ENSSTOG00000016570	-	96	57.692	Ictidomys_tridecemlineatus
ENSEBUG00000008253	alyref	95	49.640	ENSKMAG00000008912	alyref	99	51.111	Kryptolebias_marmoratus
ENSEBUG00000008253	alyref	95	46.484	ENSKMAG00000006462	-	97	45.703	Kryptolebias_marmoratus
ENSEBUG00000008253	alyref	95	42.014	ENSLBEG00000005387	-	62	47.568	Labrus_bergylta
ENSEBUG00000008253	alyref	95	45.283	ENSLBEG00000012930	-	99	44.828	Labrus_bergylta
ENSEBUG00000008253	alyref	95	50.916	ENSLBEG00000023118	alyref	90	49.451	Labrus_bergylta
ENSEBUG00000008253	alyref	70	49.065	ENSLOCG00000013879	alyref	89	48.837	Lepisosteus_oculatus
ENSEBUG00000008253	alyref	95	50.181	ENSMAMG00000003034	alyref	99	52.416	Mastacembelus_armatus
ENSEBUG00000008253	alyref	95	45.349	ENSMAMG00000005464	-	98	44.828	Mastacembelus_armatus
ENSEBUG00000008253	alyref	95	50.000	ENSMZEG00005008639	alyref	99	51.111	Maylandia_zebra
ENSEBUG00000008253	alyref	96	41.844	ENSMZEG00005012096	-	98	46.840	Maylandia_zebra
ENSEBUG00000008253	alyref	96	44.195	ENSMMOG00000007032	-	98	45.525	Mola_mola
ENSEBUG00000008253	alyref	95	51.460	ENSMMOG00000012458	alyref	96	53.383	Mola_mola
ENSEBUG00000008253	alyref	96	41.844	ENSMALG00000006054	-	98	41.606	Monopterus_albus
ENSEBUG00000008253	alyref	72	51.777	ENSMLUG00000030671	-	73	51.244	Myotis_lucifugus
ENSEBUG00000008253	alyref	95	43.816	ENSMLUG00000006521	-	98	47.674	Myotis_lucifugus
ENSEBUG00000008253	alyref	94	46.067	ENSMLUG00000009247	-	98	47.710	Myotis_lucifugus
ENSEBUG00000008253	alyref	94	47.842	ENSMLUG00000022467	-	75	50.943	Myotis_lucifugus
ENSEBUG00000008253	alyref	70	51.020	ENSMLUG00000028605	-	98	47.080	Myotis_lucifugus
ENSEBUG00000008253	alyref	94	47.940	ENSMLUG00000022178	-	98	49.624	Myotis_lucifugus
ENSEBUG00000008253	alyref	94	44.043	ENSMLUG00000014372	-	98	47.860	Myotis_lucifugus
ENSEBUG00000008253	alyref	95	43.636	ENSMLUG00000004098	-	98	49.027	Myotis_lucifugus
ENSEBUG00000008253	alyref	95	54.183	ENSNGAG00000022014	-	99	53.571	Nannospalax_galili
ENSEBUG00000008253	alyref	95	50.000	ENSNBRG00000001747	alyref	99	50.735	Neolamprologus_brichardi
ENSEBUG00000008253	alyref	95	42.143	ENSNBRG00000017460	-	99	46.494	Neolamprologus_brichardi
ENSEBUG00000008253	alyref	95	49.091	ENSONIG00000019434	alyref	99	51.636	Oreochromis_niloticus
ENSEBUG00000008253	alyref	96	42.446	ENSONIG00000003296	-	98	46.212	Oreochromis_niloticus
ENSEBUG00000008253	alyref	98	35.849	ENSORLG00000001620	-	50	47.253	Oryzias_latipes
ENSEBUG00000008253	alyref	96	40.441	ENSORLG00020015673	-	98	43.750	Oryzias_latipes_hni
ENSEBUG00000008253	alyref	96	48.699	ENSORLG00020011942	alyref	99	49.813	Oryzias_latipes_hni
ENSEBUG00000008253	alyref	96	49.813	ENSORLG00015022664	alyref	99	49.434	Oryzias_latipes_hsok
ENSEBUG00000008253	alyref	96	39.209	ENSORLG00015015143	-	98	43.798	Oryzias_latipes_hsok
ENSEBUG00000008253	alyref	95	43.866	ENSOMEG00000007158	-	97	42.697	Oryzias_melastigma
ENSEBUG00000008253	alyref	95	51.648	ENSOMEG00000019176	alyref	99	53.383	Oryzias_melastigma
ENSEBUG00000008253	alyref	66	57.065	ENSPPAG00000036403	-	72	59.239	Pan_paniscus
ENSEBUG00000008253	alyref	95	53.846	ENSPKIG00000006233	-	80	53.077	Paramormyrops_kingsleyae
ENSEBUG00000008253	alyref	95	53.725	ENSPKIG00000007070	alyref	99	55.294	Paramormyrops_kingsleyae
ENSEBUG00000008253	alyref	70	47.120	ENSPMGG00000012994	-	93	46.927	Periophthalmus_magnuspinnatus
ENSEBUG00000008253	alyref	95	51.673	ENSPMGG00000016600	alyref	90	53.008	Periophthalmus_magnuspinnatus
ENSEBUG00000008253	alyref	95	52.191	ENSPEMG00000016628	-	99	50.199	Peromyscus_maniculatus_bairdii
ENSEBUG00000008253	alyref	95	43.019	ENSPFOG00000017094	-	98	43.678	Poecilia_formosa
ENSEBUG00000008253	alyref	95	50.916	ENSPFOG00000022825	alyref	98	51.493	Poecilia_formosa
ENSEBUG00000008253	alyref	95	52.941	ENSPLAG00000006948	alyref	99	52.060	Poecilia_latipinna
ENSEBUG00000008253	alyref	95	43.019	ENSPLAG00000014380	-	98	43.678	Poecilia_latipinna
ENSEBUG00000008253	alyref	95	43.019	ENSPMEG00000023039	-	98	43.678	Poecilia_mexicana
ENSEBUG00000008253	alyref	95	51.282	ENSPMEG00000003547	alyref	99	51.493	Poecilia_mexicana
ENSEBUG00000008253	alyref	95	52.206	ENSPREG00000015795	alyref	99	52.060	Poecilia_reticulata
ENSEBUG00000008253	alyref	95	45.385	ENSPREG00000003649	-	99	43.609	Poecilia_reticulata
ENSEBUG00000008253	alyref	96	40.989	ENSPNYG00000002879	-	99	44.928	Pundamilia_nyererei
ENSEBUG00000008253	alyref	95	50.000	ENSPNYG00000017498	alyref	99	51.111	Pundamilia_nyererei
ENSEBUG00000008253	alyref	95	50.558	ENSPNAG00000002531	alyref	99	52.788	Pygocentrus_nattereri
ENSEBUG00000008253	alyref	65	57.609	ENSSBOG00000030924	-	83	60.112	Saimiri_boliviensis_boliviensis
ENSEBUG00000008253	alyref	96	43.060	ENSSHAG00000000609	-	100	43.411	Sarcophilus_harrisii
ENSEBUG00000008253	alyref	96	43.446	ENSSHAG00000012866	-	76	43.878	Sarcophilus_harrisii
ENSEBUG00000008253	alyref	73	50.971	ENSSFOG00015003923	alyref	72	51.980	Scleropages_formosus
ENSEBUG00000008253	alyref	66	58.378	ENSSFOG00015003678	alyref	84	55.135	Scleropages_formosus
ENSEBUG00000008253	alyref	95	42.446	ENSSMAG00000011169	-	97	47.716	Scophthalmus_maximus
ENSEBUG00000008253	alyref	95	49.259	ENSSMAG00000009283	alyref	99	50.741	Scophthalmus_maximus
ENSEBUG00000008253	alyref	95	48.327	ENSSDUG00000016158	alyref	99	51.301	Seriola_dumerili
ENSEBUG00000008253	alyref	95	47.037	ENSSLDG00000017803	alyref	99	50.370	Seriola_lalandi_dorsalis
ENSEBUG00000008253	alyref	95	44.891	ENSSPAG00000017028	-	96	47.529	Stegastes_partitus
ENSEBUG00000008253	alyref	95	45.956	ENSTRUG00000003051	-	99	44.195	Takifugu_rubripes
ENSEBUG00000008253	alyref	95	50.554	ENSTNIG00000011595	alyref	99	48.699	Tetraodon_nigroviridis
ENSEBUG00000008253	alyref	95	47.843	ENSTNIG00000014136	-	99	42.688	Tetraodon_nigroviridis
ENSEBUG00000008253	alyref	65	57.692	ENSVVUG00000000272	-	81	61.143	Vulpes_vulpes
ENSEBUG00000008253	alyref	95	51.661	ENSXCOG00000018047	alyref	98	53.558	Xiphophorus_couchianus
ENSEBUG00000008253	alyref	95	51.661	ENSXMAG00000012218	alyref	98	53.558	Xiphophorus_maculatus
ENSEBUG00000008253	alyref	96	43.071	ENSXMAG00000018086	-	100	44.788	Xiphophorus_maculatus