EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000008310 (Gene tree)
Gene ID: -
Gene Symbol: chd3
Alias: -
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 41190 bases
Position: chrFYBX02009540.1:3745635-3786824
Accession: ZDB-GENE-121031-4
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000013154	ResIII	PF04851.15	2.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000013730	-	6590	-	ENSEBUP00000013154	1535 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000008310's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000008310's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000008310	chd3	70	76.449	ENSEBUG00000012670	chd4a	69	75.916

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000008310	chd3	99	70.404	ENSG00000170004	CHD3	89	67.857	Homo_sapiens
ENSEBUG00000008310	chd3	83	75.897	ENSAPOG00000005614	chd3	74	86.709	Acanthochromis_polyacanthus
ENSEBUG00000008310	chd3	90	70.268	ENSAMEG00000003025	-	68	80.806	Ailuropoda_melanoleuca
ENSEBUG00000008310	chd3	86	75.830	ENSACIG00000019671	chd3	78	87.342	Amphilophus_citrinellus
ENSEBUG00000008310	chd3	81	86.709	ENSAOCG00000023784	chd3	76	86.709	Amphiprion_ocellaris
ENSEBUG00000008310	chd3	99	67.338	ENSAPEG00000006341	chd3	75	68.350	Amphiprion_percula
ENSEBUG00000008310	chd3	81	86.709	ENSATEG00000000848	chd3	74	86.709	Anabas_testudineus
ENSEBUG00000008310	chd3	99	70.732	ENSACAG00000004276	CHD3	73	70.218	Anolis_carolinensis
ENSEBUG00000008310	chd3	99	70.392	ENSANAG00000034323	CHD3	57	77.737	Aotus_nancymaae
ENSEBUG00000008310	chd3	89	73.186	ENSACLG00000009222	chd3	78	73.278	Astatotilapia_calliptera
ENSEBUG00000008310	chd3	99	70.351	ENSBTAG00000014377	CHD3	54	77.758	Bos_taurus
ENSEBUG00000008310	chd3	99	70.456	ENSCJAG00000014766	CHD3	53	77.737	Callithrix_jacchus
ENSEBUG00000008310	chd3	99	70.396	ENSCAFG00000016859	CHD3	75	69.840	Canis_familiaris
ENSEBUG00000008310	chd3	99	70.396	ENSCAFG00020007422	CHD3	82	69.840	Canis_lupus_dingo
ENSEBUG00000008310	chd3	99	70.288	ENSCHIG00000016737	CHD3	54	77.849	Capra_hircus
ENSEBUG00000008310	chd3	99	70.351	ENSTSYG00000035658	CHD3	57	74.840	Carlito_syrichta
ENSEBUG00000008310	chd3	99	67.625	ENSCAPG00000014864	CHD3	74	66.879	Cavia_aperea
ENSEBUG00000008310	chd3	99	70.370	ENSCPOG00000022653	CHD3	75	69.649	Cavia_porcellus
ENSEBUG00000008310	chd3	99	70.328	ENSCCAG00000034792	CHD3	53	77.646	Cebus_capucinus
ENSEBUG00000008310	chd3	99	70.313	ENSCATG00000041717	CHD3	54	77.758	Cercocebus_atys
ENSEBUG00000008310	chd3	99	70.415	ENSCLAG00000010523	CHD3	70	78.217	Chinchilla_lanigera
ENSEBUG00000008310	chd3	99	70.313	ENSCSAG00000011122	CHD3	54	77.758	Chlorocebus_sabaeus
ENSEBUG00000008310	chd3	80	86.301	ENSCPBG00000011966	CHD3	70	86.395	Chrysemys_picta_bellii
ENSEBUG00000008310	chd3	99	70.250	ENSCANG00000037641	CHD3	54	77.758	Colobus_angolensis_palliatus
ENSEBUG00000008310	chd3	99	70.313	ENSCGRG00001011306	Chd3	54	77.575	Cricetulus_griseus_chok1gshd
ENSEBUG00000008310	chd3	99	63.578	ENSCGRG00000007878	Chd3	73	73.066	Cricetulus_griseus_crigri
ENSEBUG00000008310	chd3	97	66.800	ENSCSEG00000004489	chd3	73	86.730	Cynoglossus_semilaevis
ENSEBUG00000008310	chd3	84	86.321	ENSCVAG00000007293	chd3	71	86.321	Cyprinodon_variegatus
ENSEBUG00000008310	chd3	99	67.397	ENSDARG00000021405	chd3	79	74.977	Danio_rerio
ENSEBUG00000008310	chd3	99	70.441	ENSDORG00000010713	Chd3	76	69.418	Dipodomys_ordii
ENSEBUG00000008310	chd3	98	68.084	ENSETEG00000017733	CHD3	75	66.710	Echinops_telfairi
ENSEBUG00000008310	chd3	99	70.494	ENSEASG00005019360	CHD3	58	77.666	Equus_asinus_asinus
ENSEBUG00000008310	chd3	99	70.558	ENSECAG00000010051	CHD3	58	77.666	Equus_caballus
ENSEBUG00000008310	chd3	78	79.208	ENSEEUG00000015205	CHD3	59	82.292	Erinaceus_europaeus
ENSEBUG00000008310	chd3	80	84.354	ENSELUG00000019499	chd3	78	84.354	Esox_lucius
ENSEBUG00000008310	chd3	99	70.430	ENSFCAG00000009629	CHD3	52	77.758	Felis_catus
ENSEBUG00000008310	chd3	99	70.351	ENSFDAG00000008220	CHD3	54	78.033	Fukomys_damarensis
ENSEBUG00000008310	chd3	82	75.909	ENSGMOG00000013599	chd3	67	75.050	Gadus_morhua
ENSEBUG00000008310	chd3	99	66.288	ENSGACG00000019275	chd3	77	66.645	Gasterosteus_aculeatus
ENSEBUG00000008310	chd3	86	69.497	ENSGAGG00000013164	CHD3	81	77.778	Gopherus_agassizii
ENSEBUG00000008310	chd3	99	70.351	ENSGGOG00000013496	CHD3	75	63.877	Gorilla_gorilla
ENSEBUG00000008310	chd3	99	70.267	ENSHGLG00000012017	CHD3	53	78.033	Heterocephalus_glaber_female
ENSEBUG00000008310	chd3	86	65.639	ENSHGLG00100013902	CHD3	74	64.264	Heterocephalus_glaber_male
ENSEBUG00000008310	chd3	87	76.860	ENSIPUG00000003271	chd3	72	82.166	Ictalurus_punctatus
ENSEBUG00000008310	chd3	99	70.532	ENSSTOG00000025907	CHD3	71	77.849	Ictidomys_tridecemlineatus
ENSEBUG00000008310	chd3	99	70.823	ENSJJAG00000017633	Chd3	76	69.904	Jaculus_jaculus
ENSEBUG00000008310	chd3	83	87.000	ENSKMAG00000019292	chd3	74	73.462	Kryptolebias_marmoratus
ENSEBUG00000008310	chd3	85	83.556	ENSLBEG00000028485	chd3	66	86.730	Labrus_bergylta
ENSEBUG00000008310	chd3	98	66.859	ENSLACG00000008031	CHD3	75	66.051	Latimeria_chalumnae
ENSEBUG00000008310	chd3	95	72.079	ENSLAFG00000000572	CHD3	57	77.666	Loxodonta_africana
ENSEBUG00000008310	chd3	99	70.313	ENSMFAG00000020113	CHD3	58	75.205	Macaca_fascicularis
ENSEBUG00000008310	chd3	99	68.109	ENSMMUG00000022221	CHD3	71	73.929	Macaca_mulatta
ENSEBUG00000008310	chd3	99	70.377	ENSMNEG00000001728	CHD3	58	76.937	Macaca_nemestrina
ENSEBUG00000008310	chd3	99	70.313	ENSMLEG00000032249	CHD3	54	77.758	Mandrillus_leucophaeus
ENSEBUG00000008310	chd3	84	74.977	ENSMAMG00000000564	chd3	74	86.709	Mastacembelus_armatus
ENSEBUG00000008310	chd3	99	70.377	ENSMAUG00000013873	Chd3	58	76.406	Mesocricetus_auratus
ENSEBUG00000008310	chd3	99	70.596	ENSMICG00000008741	CHD3	54	79.245	Microcebus_murinus
ENSEBUG00000008310	chd3	99	70.479	ENSMOCG00000004848	Chd3	76	69.949	Microtus_ochrogaster
ENSEBUG00000008310	chd3	96	70.107	ENSMMOG00000012699	chd3	72	76.172	Mola_mola
ENSEBUG00000008310	chd3	99	69.873	MGP_CAROLIEiJ_G0016564	Chd3	52	77.484	Mus_caroli
ENSEBUG00000008310	chd3	99	69.962	ENSMUSG00000018474	Chd3	52	77.575	Mus_musculus
ENSEBUG00000008310	chd3	99	70.057	MGP_PahariEiJ_G0017695	Chd3	52	77.666	Mus_pahari
ENSEBUG00000008310	chd3	99	70.000	MGP_SPRETEiJ_G0017400	Chd3	52	77.575	Mus_spretus
ENSEBUG00000008310	chd3	99	70.539	ENSMPUG00000008861	CHD3	63	77.758	Mustela_putorius_furo
ENSEBUG00000008310	chd3	99	70.385	ENSMLUG00000014643	-	75	69.687	Myotis_lucifugus
ENSEBUG00000008310	chd3	99	70.147	ENSNGAG00000000773	Chd3	53	77.575	Nannospalax_galili
ENSEBUG00000008310	chd3	72	74.433	ENSNBRG00000000636	chd3	64	74.524	Neolamprologus_brichardi
ENSEBUG00000008310	chd3	99	68.827	ENSNLEG00000009770	CHD3	69	76.937	Nomascus_leucogenys
ENSEBUG00000008310	chd3	79	73.077	ENSMEUG00000005852	CHD3	62	73.077	Notamacropus_eugenii
ENSEBUG00000008310	chd3	99	70.147	ENSOPRG00000011069	CHD3	80	69.697	Ochotona_princeps
ENSEBUG00000008310	chd3	99	70.351	ENSODEG00000017785	CHD3	53	77.910	Octodon_degus
ENSEBUG00000008310	chd3	98	69.069	ENSONIG00000009292	chd3	76	68.750	Oreochromis_niloticus
ENSEBUG00000008310	chd3	99	67.369	ENSOCUG00000029299	CHD3	55	77.869	Oryctolagus_cuniculus
ENSEBUG00000008310	chd3	70	74.194	ENSORLG00000007107	chd3	64	74.378	Oryzias_latipes
ENSEBUG00000008310	chd3	72	74.071	ENSOMEG00000013691	chd3	81	69.522	Oryzias_melastigma
ENSEBUG00000008310	chd3	99	70.160	ENSOGAG00000003216	CHD3	54	77.666	Otolemur_garnettii
ENSEBUG00000008310	chd3	99	69.955	ENSOARG00000017855	CHD3	54	77.849	Ovis_aries
ENSEBUG00000008310	chd3	99	68.342	ENSPPAG00000032886	CHD3	58	73.393	Pan_paniscus
ENSEBUG00000008310	chd3	99	70.430	ENSPPRG00000000626	CHD3	54	77.758	Panthera_pardus
ENSEBUG00000008310	chd3	99	70.340	ENSPTRG00000008714	CHD3	54	77.849	Pan_troglodytes
ENSEBUG00000008310	chd3	99	70.313	ENSPANG00000023938	CHD3	58	75.205	Papio_anubis
ENSEBUG00000008310	chd3	99	69.108	ENSPKIG00000006305	chd3	76	68.325	Paramormyrops_kingsleyae
ENSEBUG00000008310	chd3	57	78.434	ENSPSIG00000010177	CHD3	77	78.295	Pelodiscus_sinensis
ENSEBUG00000008310	chd3	99	70.313	ENSPEMG00000014262	Chd3	76	69.815	Peromyscus_maniculatus_bairdii
ENSEBUG00000008310	chd3	99	70.694	ENSPCIG00000005442	CHD3	74	84.793	Phascolarctos_cinereus
ENSEBUG00000008310	chd3	98	68.762	ENSPFOG00000012464	chd3	67	74.863	Poecilia_formosa
ENSEBUG00000008310	chd3	86	78.226	ENSPLAG00000002887	chd3	70	86.730	Poecilia_latipinna
ENSEBUG00000008310	chd3	89	75.046	ENSPREG00000011044	chd3	75	74.885	Poecilia_reticulata
ENSEBUG00000008310	chd3	99	67.265	ENSPPYG00000007940	CHD3	54	73.564	Pongo_abelii
ENSEBUG00000008310	chd3	99	70.708	ENSPCOG00000020952	CHD3	54	78.193	Propithecus_coquereli
ENSEBUG00000008310	chd3	83	74.875	ENSPVAG00000016344	CHD3	63	74.917	Pteropus_vampyrus
ENSEBUG00000008310	chd3	92	76.340	ENSPNAG00000020393	chd3	80	76.433	Pygocentrus_nattereri
ENSEBUG00000008310	chd3	99	70.121	ENSRNOG00000009722	Chd3	58	77.870	Rattus_norvegicus
ENSEBUG00000008310	chd3	99	68.726	ENSRBIG00000033562	CHD3	59	75.357	Rhinopithecus_bieti
ENSEBUG00000008310	chd3	99	69.186	ENSRROG00000029554	CHD3	54	75.357	Rhinopithecus_roxellana
ENSEBUG00000008310	chd3	99	70.392	ENSSBOG00000020719	CHD3	58	77.227	Saimiri_boliviensis_boliviensis
ENSEBUG00000008310	chd3	99	70.430	ENSSHAG00000014412	CHD3	72	77.900	Sarcophilus_harrisii
ENSEBUG00000008310	chd3	93	69.327	ENSSFOG00015023123	chd3	82	67.731	Scleropages_formosus
ENSEBUG00000008310	chd3	81	86.709	ENSSMAG00000006451	chd3	74	86.709	Scophthalmus_maximus
ENSEBUG00000008310	chd3	98	67.802	ENSSPAG00000013694	chd3	77	86.709	Stegastes_partitus
ENSEBUG00000008310	chd3	99	70.430	ENSSSCG00000021363	CHD3	82	69.815	Sus_scrofa
ENSEBUG00000008310	chd3	71	74.380	ENSTRUG00000014990	chd3	65	74.839	Takifugu_rubripes
ENSEBUG00000008310	chd3	99	67.390	ENSTNIG00000012998	chd3	56	73.112	Tetraodon_nigroviridis
ENSEBUG00000008310	chd3	60	81.991	ENSTBEG00000011454	-	50	81.991	Tupaia_belangeri
ENSEBUG00000008310	chd3	99	70.224	ENSTTRG00000010295	CHD3	54	77.575	Tursiops_truncatus
ENSEBUG00000008310	chd3	85	83.871	ENSUAMG00000005475	CHD3	72	86.893	Ursus_americanus
ENSEBUG00000008310	chd3	99	70.396	ENSVVUG00000028011	CHD3	79	69.840	Vulpes_vulpes
ENSEBUG00000008310	chd3	99	65.226	ENSXETG00000012991	chd3	53	70.921	Xenopus_tropicalis
ENSEBUG00000008310	chd3	82	79.144	ENSXMAG00000016035	chd3	79	86.709	Xiphophorus_maculatus