EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000008324 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 47154 bases
Position: chrFYBX02009638.1:681593-728746
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000013151	zf-C2H2	PF00096.26	2e-16	1	4
ENSEBUP00000013151	zf-C2H2	PF00096.26	2e-16	2	4
ENSEBUP00000013151	zf-C2H2	PF00096.26	2e-16	3	4
ENSEBUP00000013151	zf-C2H2	PF00096.26	2e-16	4	4
ENSEBUP00000013161	zf-C2H2	PF00096.26	4.6e-16	1	4
ENSEBUP00000013161	zf-C2H2	PF00096.26	4.6e-16	2	4
ENSEBUP00000013161	zf-C2H2	PF00096.26	4.6e-16	3	4
ENSEBUP00000013161	zf-C2H2	PF00096.26	4.6e-16	4	4
ENSEBUP00000013151	zf-met	PF12874.7	0.0001	1	1
ENSEBUP00000013161	zf-met	PF12874.7	0.00023	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000013737	-	1804	-	ENSEBUP00000013161	253 (aa)	-	-
ENSEBUT00000013728	-	1730	-	ENSEBUP00000013151	218 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000008324's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000008324's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000008324	-	100	54.054	ENSEBUG00000008852	ZNF845	95	51.818
ENSEBUG00000008324	-	93	38.889	ENSEBUG00000013577	-	83	36.207
ENSEBUG00000008324	-	93	51.724	ENSEBUG00000010472	-	97	51.724
ENSEBUG00000008324	-	100	52.252	ENSEBUG00000009208	-	84	52.252
ENSEBUG00000008324	-	100	54.955	ENSEBUG00000009909	-	99	54.955
ENSEBUG00000008324	-	100	54.955	ENSEBUG00000008988	ZNF845	99	54.955
ENSEBUG00000008324	-	100	47.170	ENSEBUG00000002606	-	99	47.170
ENSEBUG00000008324	-	93	46.316	ENSEBUG00000003573	-	98	46.316
ENSEBUG00000008324	-	50	59.524	ENSEBUG00000013016	-	71	59.524
ENSEBUG00000008324	-	100	53.153	ENSEBUG00000009291	-	99	53.153
ENSEBUG00000008324	-	100	57.143	ENSEBUG00000007308	ZNF845	99	57.143

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000008324	-	84	39.080	ENSAMXG00000034333	-	51	42.857	Astyanax_mexicanus
ENSEBUG00000008324	-	88	43.023	ENSMMOG00000000299	-	85	50.820	Mola_mola
ENSEBUG00000008324	-	87	38.739	ENSSPAG00000008610	-	60	36.842	Stegastes_partitus