EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000008386 (Gene tree)
Gene ID: -
Gene Symbol: NCBP1
Alias: CBP80|NCBP|Sto1
Full Name: nuclear cap binding protein subunit 1
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 156603 bases
Position: chrFYBX02000108.1:365162-521764
Accession: 7658
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000013274	MIF4G_like	PF09088.11	1.6e-39	1	1
ENSEBUP00000013306	MIF4G_like	PF09088.11	2.1e-17	1	1
ENSEBUP00000013306	MIF4G_like_2	PF09090.11	1.6e-85	1	1
ENSEBUP00000013274	MIF4G_like_2	PF09090.11	1.7e-85	1	1
ENSEBUP00000013306	MIF4G	PF02854.19	6.8e-27	1	1
ENSEBUP00000013274	MIF4G	PF02854.19	1.4e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000013882	NCBP1-202	5039	-	ENSEBUP00000013306	773 (aa)	-	-
ENSEBUT00000013850	NCBP1-201	5102	-	ENSEBUP00000013274	794 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000008386's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000008386's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000008386	NCBP1	100	73.459	ENSG00000136937	NCBP1	100	73.711	Homo_sapiens
ENSEBUG00000008386	NCBP1	99	73.618	ENSAPOG00000008002	NCBP1	99	73.618	Acanthochromis_polyacanthus
ENSEBUG00000008386	NCBP1	100	73.333	ENSAMEG00000004763	NCBP1	100	73.585	Ailuropoda_melanoleuca
ENSEBUG00000008386	NCBP1	99	74.055	ENSACIG00000000274	NCBP1	99	74.055	Amphilophus_citrinellus
ENSEBUG00000008386	NCBP1	99	73.744	ENSAOCG00000021148	NCBP1	99	73.744	Amphiprion_ocellaris
ENSEBUG00000008386	NCBP1	99	73.744	ENSAPEG00000001701	NCBP1	99	73.744	Amphiprion_percula
ENSEBUG00000008386	NCBP1	99	74.088	ENSATEG00000006929	NCBP1	99	74.088	Anabas_testudineus
ENSEBUG00000008386	NCBP1	95	73.518	ENSAPLG00000016318	NCBP1	100	73.781	Anas_platyrhynchos
ENSEBUG00000008386	NCBP1	100	72.603	ENSACAG00000004409	NCBP1	87	72.603	Anolis_carolinensis
ENSEBUG00000008386	NCBP1	100	71.142	ENSANAG00000025744	NCBP1	99	73.343	Aotus_nancymaae
ENSEBUG00000008386	NCBP1	99	74.088	ENSACLG00000014812	NCBP1	99	74.088	Astatotilapia_calliptera
ENSEBUG00000008386	NCBP1	99	72.522	ENSAMXG00000016364	NCBP1	99	72.522	Astyanax_mexicanus
ENSEBUG00000008386	NCBP1	100	73.333	ENSBTAG00000009732	NCBP1	99	75.676	Bos_taurus
ENSEBUG00000008386	NCBP1	99	35.741	WBGene00018156	ncbp-1	99	35.741	Caenorhabditis_elegans
ENSEBUG00000008386	NCBP1	100	73.459	ENSCJAG00000010840	NCBP1	100	75.238	Callithrix_jacchus
ENSEBUG00000008386	NCBP1	100	73.459	ENSCAFG00000002445	NCBP1	100	73.711	Canis_familiaris
ENSEBUG00000008386	NCBP1	98	73.752	ENSCAFG00020017997	NCBP1	100	73.469	Canis_lupus_dingo
ENSEBUG00000008386	NCBP1	100	73.333	ENSCHIG00000020139	NCBP1	100	73.585	Capra_hircus
ENSEBUG00000008386	NCBP1	54	75.540	ENSTSYG00000011914	NCBP1	98	77.116	Carlito_syrichta
ENSEBUG00000008386	NCBP1	80	67.524	ENSCAPG00000014252	NCBP1	90	67.524	Cavia_aperea
ENSEBUG00000008386	NCBP1	95	73.413	ENSCPOG00000012573	NCBP1	99	73.677	Cavia_porcellus
ENSEBUG00000008386	NCBP1	100	73.459	ENSCCAG00000032297	NCBP1	100	73.711	Cebus_capucinus
ENSEBUG00000008386	NCBP1	100	73.459	ENSCATG00000010052	NCBP1	100	73.711	Cercocebus_atys
ENSEBUG00000008386	NCBP1	100	73.459	ENSCLAG00000014339	NCBP1	100	73.711	Chinchilla_lanigera
ENSEBUG00000008386	NCBP1	100	73.459	ENSCSAG00000010929	NCBP1	100	73.711	Chlorocebus_sabaeus
ENSEBUG00000008386	NCBP1	89	77.143	ENSCHOG00000010332	NCBP1	91	72.650	Choloepus_hoffmanni
ENSEBUG00000008386	NCBP1	100	71.985	ENSCPBG00000024344	NCBP1	99	73.416	Chrysemys_picta_bellii
ENSEBUG00000008386	NCBP1	99	55.082	ENSCING00000008990	-	99	55.082	Ciona_intestinalis
ENSEBUG00000008386	NCBP1	99	52.310	ENSCSAVG00000005300	-	99	53.646	Ciona_savignyi
ENSEBUG00000008386	NCBP1	100	73.459	ENSCANG00000036913	NCBP1	100	73.711	Colobus_angolensis_palliatus
ENSEBUG00000008386	NCBP1	100	73.082	ENSCGRG00001015771	Ncbp1	100	73.333	Cricetulus_griseus_chok1gshd
ENSEBUG00000008386	NCBP1	98	73.402	ENSCGRG00000010311	Ncbp1	99	73.657	Cricetulus_griseus_crigri
ENSEBUG00000008386	NCBP1	99	73.585	ENSCSEG00000012377	NCBP1	99	73.585	Cynoglossus_semilaevis
ENSEBUG00000008386	NCBP1	99	72.739	ENSCVAG00000008795	NCBP1	99	72.739	Cyprinodon_variegatus
ENSEBUG00000008386	NCBP1	100	73.208	ENSDNOG00000006885	NCBP1	100	73.459	Dasypus_novemcinctus
ENSEBUG00000008386	NCBP1	100	70.189	ENSDORG00000013652	Ncbp1	100	70.440	Dipodomys_ordii
ENSEBUG00000008386	NCBP1	100	56.312	FBgn0022942	Cbp80	100	57.179	Drosophila_melanogaster
ENSEBUG00000008386	NCBP1	99	31.457	FBgn0038887	CG7907	99	31.457	Drosophila_melanogaster
ENSEBUG00000008386	NCBP1	89	70.043	ENSETEG00000009705	NCBP1	89	70.043	Echinops_telfairi
ENSEBUG00000008386	NCBP1	100	72.956	ENSEASG00005022795	NCBP1	100	73.208	Equus_asinus_asinus
ENSEBUG00000008386	NCBP1	100	73.082	ENSECAG00000013847	NCBP1	100	73.333	Equus_caballus
ENSEBUG00000008386	NCBP1	96	69.868	ENSEEUG00000015973	NCBP1	99	70.039	Erinaceus_europaeus
ENSEBUG00000008386	NCBP1	99	72.236	ENSELUG00000022519	NCBP1	99	72.236	Esox_lucius
ENSEBUG00000008386	NCBP1	100	73.333	ENSFCAG00000001206	NCBP1	100	73.585	Felis_catus
ENSEBUG00000008386	NCBP1	98	74.046	ENSFALG00000001193	NCBP1	100	74.300	Ficedula_albicollis
ENSEBUG00000008386	NCBP1	100	73.459	ENSFDAG00000010864	NCBP1	100	73.724	Fukomys_damarensis
ENSEBUG00000008386	NCBP1	99	73.241	ENSFHEG00000000655	NCBP1	99	73.241	Fundulus_heteroclitus
ENSEBUG00000008386	NCBP1	99	72.111	ENSGMOG00000008653	NCBP1	99	72.111	Gadus_morhua
ENSEBUG00000008386	NCBP1	98	74.392	ENSGALG00000002087	NCBP1	100	74.340	Gallus_gallus
ENSEBUG00000008386	NCBP1	99	73.618	ENSGAFG00000017787	NCBP1	99	73.618	Gambusia_affinis
ENSEBUG00000008386	NCBP1	99	72.898	ENSGACG00000016772	NCBP1	98	72.898	Gasterosteus_aculeatus
ENSEBUG00000008386	NCBP1	98	74.235	ENSGAGG00000019483	NCBP1	99	74.362	Gopherus_agassizii
ENSEBUG00000008386	NCBP1	100	73.459	ENSGGOG00000001376	NCBP1	100	73.711	Gorilla_gorilla
ENSEBUG00000008386	NCBP1	99	74.088	ENSHBUG00000020843	NCBP1	99	74.088	Haplochromis_burtoni
ENSEBUG00000008386	NCBP1	100	73.459	ENSHGLG00000001882	NCBP1	100	73.711	Heterocephalus_glaber_female
ENSEBUG00000008386	NCBP1	100	63.784	ENSHGLG00000018112	-	100	63.784	Heterocephalus_glaber_female
ENSEBUG00000008386	NCBP1	100	63.534	ENSHGLG00100017373	-	100	63.534	Heterocephalus_glaber_male
ENSEBUG00000008386	NCBP1	100	73.459	ENSHGLG00100013014	NCBP1	100	73.711	Heterocephalus_glaber_male
ENSEBUG00000008386	NCBP1	77	66.016	ENSHCOG00000000204	NCBP1	91	66.016	Hippocampus_comes
ENSEBUG00000008386	NCBP1	99	72.362	ENSIPUG00000007275	ncbp1	99	72.613	Ictalurus_punctatus
ENSEBUG00000008386	NCBP1	100	73.459	ENSSTOG00000002695	NCBP1	100	73.711	Ictidomys_tridecemlineatus
ENSEBUG00000008386	NCBP1	99	73.585	ENSKMAG00000003594	NCBP1	99	76.268	Kryptolebias_marmoratus
ENSEBUG00000008386	NCBP1	99	72.208	ENSLBEG00000011661	NCBP1	99	72.208	Labrus_bergylta
ENSEBUG00000008386	NCBP1	100	68.323	ENSLACG00000013955	NCBP1	100	68.323	Latimeria_chalumnae
ENSEBUG00000008386	NCBP1	99	63.138	ENSLOCG00000009579	NCBP1	99	63.433	Lepisosteus_oculatus
ENSEBUG00000008386	NCBP1	100	73.585	ENSLAFG00000005999	NCBP1	100	73.836	Loxodonta_africana
ENSEBUG00000008386	NCBP1	100	73.459	ENSMFAG00000030994	NCBP1	100	73.711	Macaca_fascicularis
ENSEBUG00000008386	NCBP1	98	73.657	ENSMMUG00000012281	NCBP1	99	73.913	Macaca_mulatta
ENSEBUG00000008386	NCBP1	100	73.459	ENSMNEG00000042790	NCBP1	100	73.711	Macaca_nemestrina
ENSEBUG00000008386	NCBP1	100	73.459	ENSMLEG00000030374	NCBP1	100	73.711	Mandrillus_leucophaeus
ENSEBUG00000008386	NCBP1	99	73.459	ENSMAMG00000014806	NCBP1	99	73.503	Mastacembelus_armatus
ENSEBUG00000008386	NCBP1	97	73.247	ENSMZEG00005009290	-	99	73.247	Maylandia_zebra
ENSEBUG00000008386	NCBP1	99	74.088	ENSMZEG00005003469	NCBP1	99	74.088	Maylandia_zebra
ENSEBUG00000008386	NCBP1	100	71.518	ENSMAUG00000020583	Ncbp1	99	73.657	Mesocricetus_auratus
ENSEBUG00000008386	NCBP1	100	73.082	ENSMICG00000012682	NCBP1	100	73.333	Microcebus_murinus
ENSEBUG00000008386	NCBP1	100	72.956	ENSMOCG00000015818	Ncbp1	100	73.208	Microtus_ochrogaster
ENSEBUG00000008386	NCBP1	90	71.967	ENSMMOG00000002610	NCBP1	99	71.967	Mola_mola
ENSEBUG00000008386	NCBP1	100	73.333	ENSMODG00000003202	NCBP1	99	73.711	Monodelphis_domestica
ENSEBUG00000008386	NCBP1	99	73.836	ENSMALG00000003547	NCBP1	99	73.836	Monopterus_albus
ENSEBUG00000008386	NCBP1	100	73.585	MGP_CAROLIEiJ_G0025982	Ncbp1	100	73.836	Mus_caroli
ENSEBUG00000008386	NCBP1	100	73.585	ENSMUSG00000028330	Ncbp1	100	73.836	Mus_musculus
ENSEBUG00000008386	NCBP1	100	73.208	MGP_PahariEiJ_G0028318	Ncbp1	100	73.459	Mus_pahari
ENSEBUG00000008386	NCBP1	100	73.585	MGP_SPRETEiJ_G0026945	Ncbp1	100	73.836	Mus_spretus
ENSEBUG00000008386	NCBP1	100	73.585	ENSMPUG00000006399	NCBP1	100	73.836	Mustela_putorius_furo
ENSEBUG00000008386	NCBP1	98	73.359	ENSMLUG00000015201	NCBP1	99	73.616	Myotis_lucifugus
ENSEBUG00000008386	NCBP1	100	73.651	ENSNGAG00000014101	Ncbp1	100	73.651	Nannospalax_galili
ENSEBUG00000008386	NCBP1	75	76.856	ENSNBRG00000014674	NCBP1	96	76.856	Neolamprologus_brichardi
ENSEBUG00000008386	NCBP1	100	73.459	ENSNLEG00000016909	NCBP1	100	73.711	Nomascus_leucogenys
ENSEBUG00000008386	NCBP1	89	73.904	ENSMEUG00000010672	NCBP1	90	73.904	Notamacropus_eugenii
ENSEBUG00000008386	NCBP1	79	85.294	ENSOPRG00000002144	-	83	85.294	Ochotona_princeps
ENSEBUG00000008386	NCBP1	100	73.333	ENSODEG00000003232	NCBP1	100	73.585	Octodon_degus
ENSEBUG00000008386	NCBP1	99	73.836	ENSONIG00000001502	NCBP1	99	73.836	Oreochromis_niloticus
ENSEBUG00000008386	NCBP1	78	75.441	ENSOANG00000001918	NCBP1	100	75.441	Ornithorhynchus_anatinus
ENSEBUG00000008386	NCBP1	98	72.471	ENSOCUG00000013853	NCBP1	97	72.855	Oryctolagus_cuniculus
ENSEBUG00000008386	NCBP1	99	72.841	ENSORLG00000011008	NCBP1	99	72.841	Oryzias_latipes
ENSEBUG00000008386	NCBP1	99	73.091	ENSORLG00020017455	NCBP1	99	73.091	Oryzias_latipes_hni
ENSEBUG00000008386	NCBP1	99	72.966	ENSORLG00015012127	NCBP1	99	72.966	Oryzias_latipes_hsok
ENSEBUG00000008386	NCBP1	99	72.716	ENSOMEG00000020698	NCBP1	99	72.716	Oryzias_melastigma
ENSEBUG00000008386	NCBP1	100	73.459	ENSOGAG00000013888	NCBP1	100	73.711	Otolemur_garnettii
ENSEBUG00000008386	NCBP1	100	73.333	ENSOARG00000011233	NCBP1	100	73.585	Ovis_aries
ENSEBUG00000008386	NCBP1	100	73.459	ENSPPAG00000026462	NCBP1	100	73.711	Pan_paniscus
ENSEBUG00000008386	NCBP1	100	73.459	ENSPPRG00000022574	NCBP1	100	73.711	Panthera_pardus
ENSEBUG00000008386	NCBP1	100	73.459	ENSPTIG00000018507	NCBP1	100	73.711	Panthera_tigris_altaica
ENSEBUG00000008386	NCBP1	100	73.459	ENSPTRG00000021167	NCBP1	100	73.711	Pan_troglodytes
ENSEBUG00000008386	NCBP1	100	73.459	ENSPANG00000025591	NCBP1	100	73.711	Papio_anubis
ENSEBUG00000008386	NCBP1	100	72.522	ENSPKIG00000015861	NCBP1	100	72.522	Paramormyrops_kingsleyae
ENSEBUG00000008386	NCBP1	64	71.680	ENSPSIG00000009558	NCBP1	100	72.070	Pelodiscus_sinensis
ENSEBUG00000008386	NCBP1	99	70.603	ENSPMGG00000020476	NCBP1	99	70.603	Periophthalmus_magnuspinnatus
ENSEBUG00000008386	NCBP1	100	72.956	ENSPEMG00000020105	Ncbp1	100	73.333	Peromyscus_maniculatus_bairdii
ENSEBUG00000008386	NCBP1	100	70.690	ENSPMAG00000005533	NCBP1	100	70.690	Petromyzon_marinus
ENSEBUG00000008386	NCBP1	100	73.208	ENSPCIG00000015800	NCBP1	99	73.585	Phascolarctos_cinereus
ENSEBUG00000008386	NCBP1	99	73.342	ENSPFOG00000004158	NCBP1	99	73.342	Poecilia_formosa
ENSEBUG00000008386	NCBP1	99	73.492	ENSPLAG00000020002	NCBP1	99	73.492	Poecilia_latipinna
ENSEBUG00000008386	NCBP1	99	73.618	ENSPMEG00000019821	NCBP1	99	73.618	Poecilia_mexicana
ENSEBUG00000008386	NCBP1	99	73.526	ENSPREG00000006035	NCBP1	99	73.526	Poecilia_reticulata
ENSEBUG00000008386	NCBP1	100	73.459	ENSPPYG00000019426	NCBP1	100	73.711	Pongo_abelii
ENSEBUG00000008386	NCBP1	90	70.270	ENSPCAG00000009943	NCBP1	85	78.276	Procavia_capensis
ENSEBUG00000008386	NCBP1	81	73.684	ENSPCOG00000020024	NCBP1	98	73.684	Propithecus_coquereli
ENSEBUG00000008386	NCBP1	100	73.082	ENSPVAG00000005924	NCBP1	100	73.333	Pteropus_vampyrus
ENSEBUG00000008386	NCBP1	90	72.626	ENSPNYG00000002140	NCBP1	99	72.626	Pundamilia_nyererei
ENSEBUG00000008386	NCBP1	99	72.898	ENSPNAG00000027753	NCBP1	99	72.898	Pygocentrus_nattereri
ENSEBUG00000008386	NCBP1	100	73.208	ENSRNOG00000023605	Ncbp1	100	73.585	Rattus_norvegicus
ENSEBUG00000008386	NCBP1	100	73.459	ENSRBIG00000043175	NCBP1	100	73.711	Rhinopithecus_bieti
ENSEBUG00000008386	NCBP1	100	73.459	ENSRROG00000029767	NCBP1	100	73.711	Rhinopithecus_roxellana
ENSEBUG00000008386	NCBP1	100	73.459	ENSSBOG00000019378	NCBP1	98	76.829	Saimiri_boliviensis_boliviensis
ENSEBUG00000008386	NCBP1	70	71.264	ENSSHAG00000015882	NCBP1	72	73.077	Sarcophilus_harrisii
ENSEBUG00000008386	NCBP1	98	72.797	ENSSFOG00015001872	NCBP1	100	72.327	Scleropages_formosus
ENSEBUG00000008386	NCBP1	99	73.116	ENSSMAG00000007463	NCBP1	99	73.116	Scophthalmus_maximus
ENSEBUG00000008386	NCBP1	99	73.770	ENSSDUG00000007019	NCBP1	100	73.598	Seriola_dumerili
ENSEBUG00000008386	NCBP1	99	73.585	ENSSLDG00000021924	NCBP1	99	73.585	Seriola_lalandi_dorsalis
ENSEBUG00000008386	NCBP1	85	64.642	ENSSARG00000007274	NCBP1	87	65.293	Sorex_araneus
ENSEBUG00000008386	NCBP1	100	68.090	ENSSPUG00000008609	NCBP1	100	68.467	Sphenodon_punctatus
ENSEBUG00000008386	NCBP1	99	73.836	ENSSPAG00000012550	NCBP1	99	73.836	Stegastes_partitus
ENSEBUG00000008386	NCBP1	100	73.208	ENSSSCG00000005366	NCBP1	100	73.459	Sus_scrofa
ENSEBUG00000008386	NCBP1	100	69.887	ENSTGUG00000001472	NCBP1	100	70.389	Taeniopygia_guttata
ENSEBUG00000008386	NCBP1	99	73.836	ENSTRUG00000005287	NCBP1	99	73.836	Takifugu_rubripes
ENSEBUG00000008386	NCBP1	100	70.818	ENSTBEG00000004035	NCBP1	100	71.069	Tupaia_belangeri
ENSEBUG00000008386	NCBP1	88	74.146	ENSTTRG00000000507	NCBP1	88	74.146	Tursiops_truncatus
ENSEBUG00000008386	NCBP1	100	73.585	ENSUAMG00000005471	NCBP1	100	73.836	Ursus_americanus
ENSEBUG00000008386	NCBP1	97	71.762	ENSUMAG00000011865	NCBP1	100	73.469	Ursus_maritimus
ENSEBUG00000008386	NCBP1	100	69.686	ENSVPAG00000010537	NCBP1	100	69.937	Vicugna_pacos
ENSEBUG00000008386	NCBP1	100	73.459	ENSVVUG00000019725	NCBP1	100	73.711	Vulpes_vulpes
ENSEBUG00000008386	NCBP1	100	70.640	ENSXETG00000010179	ncbp1	100	70.640	Xenopus_tropicalis
ENSEBUG00000008386	NCBP1	99	73.492	ENSXMAG00000018253	NCBP1	99	73.492	Xiphophorus_maculatus