EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSEBUG00000008428 (Gene tree)
Gene ID: -
Gene Symbol: plrg1
Alias: wu:fi74f01|zgc:55651|zgc:86603
Full Name: pleiotropic regulator 1
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 426806 bases
Position: chrFYBX02009951.1:42444-469249
Accession: ZDB-GENE-040426-2787
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000013475	RRM_1	PF00076.22	1.8e-28	1	3
ENSEBUP00000013475	RRM_1	PF00076.22	1.8e-28	2	3
ENSEBUP00000013475	RRM_1	PF00076.22	1.8e-28	3	3
ENSEBUP00000013423	RRM_1	PF00076.22	1.6e-27	1	3
ENSEBUP00000013423	RRM_1	PF00076.22	1.6e-27	2	3
ENSEBUP00000013423	RRM_1	PF00076.22	1.6e-27	3	3
ENSEBUP00000013329	RRM_1	PF00076.22	2e-27	1	3
ENSEBUP00000013329	RRM_1	PF00076.22	2e-27	2	3
ENSEBUP00000013329	RRM_1	PF00076.22	2e-27	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000014051	-	6455	-	ENSEBUP00000013475	528 (aa)	-	-
ENSEBUT00000013999	-	3136	-	ENSEBUP00000013423	941 (aa)	-	-
ENSEBUT00000013905	-	4001	-	ENSEBUP00000013329	1004 (aa)	-	-
ENSEBUT00000013939	-	3564	-	ENSEBUP00000013363	682 (aa)	-	-
ENSEBUT00000013968	-	2393	-	ENSEBUP00000013391	496 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000008428's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000008428's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000008428	plrg1	59	47.416	ENSEBUG00000014750	-	58	42.537
ENSEBUG00000008428	plrg1	74	62.374	ENSEBUG00000011912	rbm47	73	62.374
ENSEBUG00000008428	plrg1	55	54.636	ENSEBUG00000015949	-	59	54.636