EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000008509 (Gene tree)
Gene ID: -
Gene Symbol: polr2f
Alias: zgc:92790
Full Name: polymerase (RNA) II (DNA directed) polypeptide F
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 5598 bases
Position: chrFYBX02010115.1:1959861-1965458
Accession: ZDB-GENE-040718-279
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000013483	RNA_pol_Rpb6	PF01192.22	2.3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000014059	-	294	-	ENSEBUP00000013483	97 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000008509's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000008509's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000008509	polr2f	61	76.271	ENSEBUG00000002842	-	73	56.471

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000008509	polr2f	90	67.816	ENSG00000100142	POLR2F	69	80.882	Homo_sapiens
ENSEBUG00000008509	polr2f	70	85.294	ENSAPOG00000002902	polr2f	54	85.294	Acanthochromis_polyacanthus
ENSEBUG00000008509	polr2f	73	77.465	ENSAMEG00000010331	POLR2F	56	77.465	Ailuropoda_melanoleuca
ENSEBUG00000008509	polr2f	70	83.824	ENSACIG00000000923	polr2f	54	83.824	Amphilophus_citrinellus
ENSEBUG00000008509	polr2f	70	85.294	ENSAOCG00000003182	polr2f	54	85.294	Amphiprion_ocellaris
ENSEBUG00000008509	polr2f	70	85.294	ENSAPEG00000012999	polr2f	54	85.294	Amphiprion_percula
ENSEBUG00000008509	polr2f	70	83.824	ENSATEG00000008929	polr2f	54	83.824	Anabas_testudineus
ENSEBUG00000008509	polr2f	73	78.873	ENSAPLG00000015235	POLR2F	57	78.873	Anas_platyrhynchos
ENSEBUG00000008509	polr2f	73	78.873	ENSACAG00000015288	POLR2F	56	78.873	Anolis_carolinensis
ENSEBUG00000008509	polr2f	73	78.873	ENSANAG00000020840	POLR2F	58	77.465	Aotus_nancymaae
ENSEBUG00000008509	polr2f	70	83.824	ENSACLG00000016129	polr2f	54	83.824	Astatotilapia_calliptera
ENSEBUG00000008509	polr2f	70	85.294	ENSAMXG00000012812	polr2f	54	85.294	Astyanax_mexicanus
ENSEBUG00000008509	polr2f	73	77.465	ENSBTAG00000004820	POLR2F	56	77.465	Bos_taurus
ENSEBUG00000008509	polr2f	71	81.159	ENSCJAG00000048241	POLR2F	58	77.465	Callithrix_jacchus
ENSEBUG00000008509	polr2f	73	77.465	ENSCAFG00000001437	POLR2F	56	77.465	Canis_familiaris
ENSEBUG00000008509	polr2f	73	77.465	ENSCHIG00000012907	POLR2F	56	77.465	Capra_hircus
ENSEBUG00000008509	polr2f	72	80.000	ENSTSYG00000008187	POLR2F	56	80.000	Carlito_syrichta
ENSEBUG00000008509	polr2f	73	77.465	ENSCAPG00000013419	POLR2F	55	77.465	Cavia_aperea
ENSEBUG00000008509	polr2f	73	77.465	ENSCPOG00000034094	POLR2F	56	77.465	Cavia_porcellus
ENSEBUG00000008509	polr2f	78	73.684	ENSCCAG00000036489	POLR2F	61	73.684	Cebus_capucinus
ENSEBUG00000008509	polr2f	73	78.873	ENSCATG00000041014	POLR2F	58	77.465	Cercocebus_atys
ENSEBUG00000008509	polr2f	73	77.465	ENSCLAG00000017167	POLR2F	56	77.465	Chinchilla_lanigera
ENSEBUG00000008509	polr2f	73	77.465	ENSCSAG00000006862	POLR2F	56	77.465	Chlorocebus_sabaeus
ENSEBUG00000008509	polr2f	72	75.000	ENSCING00000019359	-	51	75.000	Ciona_intestinalis
ENSEBUG00000008509	polr2f	73	78.873	ENSCANG00000041884	POLR2F	58	77.465	Colobus_angolensis_palliatus
ENSEBUG00000008509	polr2f	73	77.465	ENSCGRG00001023541	POLR2F	56	77.465	Cricetulus_griseus_chok1gshd
ENSEBUG00000008509	polr2f	73	77.465	ENSCGRG00000011921	POLR2F	56	77.465	Cricetulus_griseus_crigri
ENSEBUG00000008509	polr2f	73	81.690	ENSCSEG00000006848	polr2f	56	81.690	Cynoglossus_semilaevis
ENSEBUG00000008509	polr2f	70	85.294	ENSCVAG00000010437	polr2f	54	85.294	Cyprinodon_variegatus
ENSEBUG00000008509	polr2f	70	83.824	ENSDARG00000036625	polr2f	54	83.824	Danio_rerio
ENSEBUG00000008509	polr2f	73	77.465	ENSDNOG00000005884	POLR2F	56	77.465	Dasypus_novemcinctus
ENSEBUG00000008509	polr2f	73	77.465	ENSDORG00000024789	Polr2f	56	77.465	Dipodomys_ordii
ENSEBUG00000008509	polr2f	69	71.642	FBgn0003275	RpII18	66	58.889	Drosophila_melanogaster
ENSEBUG00000008509	polr2f	71	81.159	ENSEASG00005018802	-	62	81.159	Equus_asinus_asinus
ENSEBUG00000008509	polr2f	73	73.239	ENSEEUG00000011014	POLR2F	55	73.239	Erinaceus_europaeus
ENSEBUG00000008509	polr2f	73	78.873	ENSELUG00000000319	polr2f	56	78.873	Esox_lucius
ENSEBUG00000008509	polr2f	73	77.465	ENSFCAG00000002806	POLR2F	58	77.465	Felis_catus
ENSEBUG00000008509	polr2f	73	77.465	ENSFDAG00000009926	POLR2F	56	77.465	Fukomys_damarensis
ENSEBUG00000008509	polr2f	89	71.910	ENSFHEG00000005448	polr2f	54	85.294	Fundulus_heteroclitus
ENSEBUG00000008509	polr2f	73	80.282	ENSGMOG00000009967	polr2f	56	80.282	Gadus_morhua
ENSEBUG00000008509	polr2f	73	78.873	ENSGALG00000012291	POLR2F	56	78.873	Gallus_gallus
ENSEBUG00000008509	polr2f	70	85.294	ENSGAFG00000017573	polr2f	54	85.294	Gambusia_affinis
ENSEBUG00000008509	polr2f	70	83.824	ENSGACG00000007322	polr2f	54	83.824	Gasterosteus_aculeatus
ENSEBUG00000008509	polr2f	73	78.873	ENSGAGG00000021757	POLR2F	56	78.873	Gopherus_agassizii
ENSEBUG00000008509	polr2f	90	67.816	ENSGGOG00000005213	POLR2F	69	67.816	Gorilla_gorilla
ENSEBUG00000008509	polr2f	70	83.824	ENSHBUG00000022089	polr2f	54	83.824	Haplochromis_burtoni
ENSEBUG00000008509	polr2f	73	77.465	ENSHGLG00000018942	POLR2F	56	77.465	Heterocephalus_glaber_female
ENSEBUG00000008509	polr2f	73	77.465	ENSHGLG00100012851	POLR2F	56	77.465	Heterocephalus_glaber_male
ENSEBUG00000008509	polr2f	70	82.353	ENSHCOG00000006149	polr2f	54	82.353	Hippocampus_comes
ENSEBUG00000008509	polr2f	70	85.294	ENSIPUG00000000814	polr2f	70	85.294	Ictalurus_punctatus
ENSEBUG00000008509	polr2f	73	77.465	ENSSTOG00000025722	POLR2F	56	77.465	Ictidomys_tridecemlineatus
ENSEBUG00000008509	polr2f	73	77.465	ENSJJAG00000008097	Polr2f	56	77.465	Jaculus_jaculus
ENSEBUG00000008509	polr2f	70	85.294	ENSKMAG00000014230	polr2f	54	85.294	Kryptolebias_marmoratus
ENSEBUG00000008509	polr2f	73	80.282	ENSLBEG00000008383	polr2f	59	80.282	Labrus_bergylta
ENSEBUG00000008509	polr2f	73	83.099	ENSLACG00000003931	POLR2F	56	83.099	Latimeria_chalumnae
ENSEBUG00000008509	polr2f	70	86.765	ENSLOCG00000011827	polr2f	52	86.765	Lepisosteus_oculatus
ENSEBUG00000008509	polr2f	73	77.465	ENSLAFG00000012632	POLR2F	56	77.465	Loxodonta_africana
ENSEBUG00000008509	polr2f	73	78.873	ENSMFAG00000033687	POLR2F	58	77.465	Macaca_fascicularis
ENSEBUG00000008509	polr2f	73	78.873	ENSMMUG00000038231	POLR2F	58	77.465	Macaca_mulatta
ENSEBUG00000008509	polr2f	73	78.873	ENSMNEG00000044365	POLR2F	58	77.465	Macaca_nemestrina
ENSEBUG00000008509	polr2f	73	78.873	ENSMLEG00000033077	POLR2F	58	77.465	Mandrillus_leucophaeus
ENSEBUG00000008509	polr2f	70	85.294	ENSMAMG00000008056	polr2f	54	85.294	Mastacembelus_armatus
ENSEBUG00000008509	polr2f	70	83.824	ENSMZEG00005005705	polr2f	54	83.824	Maylandia_zebra
ENSEBUG00000008509	polr2f	73	78.873	ENSMGAG00000012504	POLR2F	56	78.873	Meleagris_gallopavo
ENSEBUG00000008509	polr2f	73	77.465	ENSMAUG00000018586	Polr2f	56	77.465	Mesocricetus_auratus
ENSEBUG00000008509	polr2f	73	78.873	ENSMICG00000013128	POLR2F	58	77.465	Microcebus_murinus
ENSEBUG00000008509	polr2f	73	77.465	ENSMOCG00000000237	Polr2f	56	77.465	Microtus_ochrogaster
ENSEBUG00000008509	polr2f	70	85.294	ENSMMOG00000005106	polr2f	54	85.294	Mola_mola
ENSEBUG00000008509	polr2f	73	78.873	ENSMODG00000019063	POLR2F	56	78.873	Monodelphis_domestica
ENSEBUG00000008509	polr2f	70	85.294	ENSMALG00000001444	polr2f	54	85.294	Monopterus_albus
ENSEBUG00000008509	polr2f	73	77.465	MGP_CAROLIEiJ_G0020006	Polr2f	56	77.465	Mus_caroli
ENSEBUG00000008509	polr2f	70	80.882	ENSMUSG00000033020	Polr2f	69	80.882	Mus_musculus
ENSEBUG00000008509	polr2f	73	77.465	MGP_PahariEiJ_G0020008	Polr2f	56	77.465	Mus_pahari
ENSEBUG00000008509	polr2f	73	77.465	MGP_SPRETEiJ_G0020904	Polr2f	56	77.465	Mus_spretus
ENSEBUG00000008509	polr2f	73	77.465	ENSMPUG00000012997	POLR2F	56	77.465	Mustela_putorius_furo
ENSEBUG00000008509	polr2f	73	71.831	ENSMLUG00000029612	-	56	71.831	Myotis_lucifugus
ENSEBUG00000008509	polr2f	71	81.159	ENSMLUG00000014315	-	53	81.159	Myotis_lucifugus
ENSEBUG00000008509	polr2f	73	77.465	ENSNGAG00000020682	Polr2f	56	77.465	Nannospalax_galili
ENSEBUG00000008509	polr2f	70	83.824	ENSNBRG00000002492	polr2f	54	83.824	Neolamprologus_brichardi
ENSEBUG00000008509	polr2f	91	67.045	ENSNLEG00000014987	-	62	74.026	Nomascus_leucogenys
ENSEBUG00000008509	polr2f	73	77.465	ENSODEG00000014123	POLR2F	56	77.465	Octodon_degus
ENSEBUG00000008509	polr2f	70	83.824	ENSONIG00000008394	polr2f	54	83.824	Oreochromis_niloticus
ENSEBUG00000008509	polr2f	73	78.873	ENSOANG00000014684	POLR2F	56	78.873	Ornithorhynchus_anatinus
ENSEBUG00000008509	polr2f	73	78.873	ENSOCUG00000012064	POLR2F	56	77.465	Oryctolagus_cuniculus
ENSEBUG00000008509	polr2f	70	83.824	ENSORLG00000014580	polr2f	54	83.824	Oryzias_latipes
ENSEBUG00000008509	polr2f	70	85.294	ENSORLG00020006910	polr2f	54	85.294	Oryzias_latipes_hni
ENSEBUG00000008509	polr2f	73	77.465	ENSOGAG00000025463	POLR2F	56	77.465	Otolemur_garnettii
ENSEBUG00000008509	polr2f	73	77.465	ENSOARG00000014692	POLR2F	56	77.465	Ovis_aries
ENSEBUG00000008509	polr2f	72	80.000	ENSPPAG00000024276	POLR2F	56	80.000	Pan_paniscus
ENSEBUG00000008509	polr2f	73	77.465	ENSPPRG00000013030	POLR2F	58	77.465	Panthera_pardus
ENSEBUG00000008509	polr2f	72	78.571	ENSPTIG00000000632	POLR2F	58	78.571	Panthera_tigris_altaica
ENSEBUG00000008509	polr2f	90	67.816	ENSPTRG00000014356	POLR2F	69	67.816	Pan_troglodytes
ENSEBUG00000008509	polr2f	73	78.873	ENSPANG00000023979	POLR2F	58	77.465	Papio_anubis
ENSEBUG00000008509	polr2f	70	85.294	ENSPKIG00000002464	polr2f	54	85.294	Paramormyrops_kingsleyae
ENSEBUG00000008509	polr2f	70	85.294	ENSPMGG00000009619	polr2f	54	85.294	Periophthalmus_magnuspinnatus
ENSEBUG00000008509	polr2f	73	77.465	ENSPEMG00000008322	Polr2f	56	77.465	Peromyscus_maniculatus_bairdii
ENSEBUG00000008509	polr2f	73	78.873	ENSPCIG00000012000	-	56	78.873	Phascolarctos_cinereus
ENSEBUG00000008509	polr2f	70	85.294	ENSPFOG00000000139	polr2f	54	85.294	Poecilia_formosa
ENSEBUG00000008509	polr2f	70	85.294	ENSPLAG00000000988	polr2f	54	85.294	Poecilia_latipinna
ENSEBUG00000008509	polr2f	70	85.294	ENSPMEG00000019063	polr2f	54	85.294	Poecilia_mexicana
ENSEBUG00000008509	polr2f	70	85.294	ENSPREG00000016749	polr2f	69	85.294	Poecilia_reticulata
ENSEBUG00000008509	polr2f	73	77.465	ENSPPYG00000011809	POLR2F	56	77.465	Pongo_abelii
ENSEBUG00000008509	polr2f	70	80.882	ENSPCOG00000025716	POLR2F	56	80.882	Propithecus_coquereli
ENSEBUG00000008509	polr2f	70	83.824	ENSPNYG00000019790	polr2f	54	83.824	Pundamilia_nyererei
ENSEBUG00000008509	polr2f	70	85.294	ENSPNAG00000009017	polr2f	54	85.294	Pygocentrus_nattereri
ENSEBUG00000008509	polr2f	73	77.465	ENSRNOG00000011214	Polr2f	56	77.465	Rattus_norvegicus
ENSEBUG00000008509	polr2f	73	78.873	ENSRBIG00000044878	POLR2F	58	77.465	Rhinopithecus_bieti
ENSEBUG00000008509	polr2f	73	78.873	ENSRROG00000019586	POLR2F	58	77.465	Rhinopithecus_roxellana
ENSEBUG00000008509	polr2f	71	81.159	ENSSBOG00000023340	POLR2F	58	77.465	Saimiri_boliviensis_boliviensis
ENSEBUG00000008509	polr2f	73	78.873	ENSSHAG00000008502	POLR2F	56	78.873	Sarcophilus_harrisii
ENSEBUG00000008509	polr2f	70	83.824	ENSSFOG00015012810	polr2f	54	83.824	Scleropages_formosus
ENSEBUG00000008509	polr2f	70	85.294	ENSSMAG00000005354	polr2f	54	85.294	Scophthalmus_maximus
ENSEBUG00000008509	polr2f	70	85.294	ENSSDUG00000016273	polr2f	54	85.294	Seriola_dumerili
ENSEBUG00000008509	polr2f	70	85.294	ENSSLDG00000024895	polr2f	54	85.294	Seriola_lalandi_dorsalis
ENSEBUG00000008509	polr2f	73	78.873	ENSSPUG00000011343	POLR2F	56	78.873	Sphenodon_punctatus
ENSEBUG00000008509	polr2f	70	83.824	ENSSPAG00000019646	polr2f	54	83.824	Stegastes_partitus
ENSEBUG00000008509	polr2f	73	77.465	ENSSSCG00000000116	POLR2F	56	77.465	Sus_scrofa
ENSEBUG00000008509	polr2f	73	78.873	ENSTGUG00000010476	POLR2F	52	78.873	Taeniopygia_guttata
ENSEBUG00000008509	polr2f	70	82.353	ENSTGUG00000016504	-	77	82.353	Taeniopygia_guttata
ENSEBUG00000008509	polr2f	70	85.294	ENSTNIG00000010827	polr2f	54	85.294	Tetraodon_nigroviridis
ENSEBUG00000008509	polr2f	73	77.465	ENSUAMG00000020504	POLR2F	56	77.465	Ursus_americanus
ENSEBUG00000008509	polr2f	73	77.465	ENSUMAG00000015052	POLR2F	56	77.465	Ursus_maritimus
ENSEBUG00000008509	polr2f	71	81.159	ENSVVUG00000024021	POLR2F	59	81.159	Vulpes_vulpes
ENSEBUG00000008509	polr2f	73	78.873	ENSXETG00000006346	polr2f	56	78.873	Xenopus_tropicalis
ENSEBUG00000008509	polr2f	70	85.294	ENSXCOG00000015983	polr2f	54	85.294	Xiphophorus_couchianus
ENSEBUG00000008509	polr2f	70	85.294	ENSXMAG00000001559	polr2f	54	85.294	Xiphophorus_maculatus