EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000008556 (Gene tree)
Gene ID: -
Gene Symbol: rtca
Alias: cb158|rtcd1|sb:cb158|wu:fc62c03
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 47549 bases
Position: chrFYBX02009589.1:64363-111911
Accession: ZDB-GENE-030131-9687
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000013562	RTC	PF01137.21	5.4e-78	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000014138	-	960	-	ENSEBUP00000013562	319 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000008556's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000008556's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000008556	rtca	97	54.237	ENSG00000137996	RTCA	100	64.000	Homo_sapiens
ENSEBUG00000008556	rtca	95	52.312	ENSAPOG00000001345	rtca	94	52.312	Acanthochromis_polyacanthus
ENSEBUG00000008556	rtca	66	51.969	ENSAMEG00000008855	RTCA	94	51.969	Ailuropoda_melanoleuca
ENSEBUG00000008556	rtca	95	51.453	ENSACIG00000019643	rtca	94	51.453	Amphilophus_citrinellus
ENSEBUG00000008556	rtca	95	51.744	ENSAOCG00000014979	rtca	93	51.744	Amphiprion_ocellaris
ENSEBUG00000008556	rtca	95	51.744	ENSAPEG00000006945	rtca	93	51.744	Amphiprion_percula
ENSEBUG00000008556	rtca	92	52.695	ENSATEG00000006315	rtca	91	52.695	Anabas_testudineus
ENSEBUG00000008556	rtca	91	54.925	ENSAPLG00000015430	RTCA	94	54.925	Anas_platyrhynchos
ENSEBUG00000008556	rtca	51	66.463	ENSACAG00000003290	RTCA	92	66.463	Anolis_carolinensis
ENSEBUG00000008556	rtca	97	54.520	ENSANAG00000025446	RTCA	95	54.520	Aotus_nancymaae
ENSEBUG00000008556	rtca	95	52.616	ENSACLG00000020770	rtca	93	52.616	Astatotilapia_calliptera
ENSEBUG00000008556	rtca	96	53.736	ENSAMXG00000043271	rtca	95	53.736	Astyanax_mexicanus
ENSEBUG00000008556	rtca	97	54.520	ENSBTAG00000006321	RTCA	95	54.520	Bos_taurus
ENSEBUG00000008556	rtca	97	54.237	ENSCJAG00000003398	RTCA	95	54.237	Callithrix_jacchus
ENSEBUG00000008556	rtca	97	54.237	ENSCAFG00000020010	RTCA	65	54.237	Canis_familiaris
ENSEBUG00000008556	rtca	97	54.237	ENSCAFG00020011528	RTCA	55	54.237	Canis_lupus_dingo
ENSEBUG00000008556	rtca	97	54.520	ENSCHIG00000018937	RTCA	95	54.520	Capra_hircus
ENSEBUG00000008556	rtca	97	55.932	ENSTSYG00000011305	RTCA	95	55.932	Carlito_syrichta
ENSEBUG00000008556	rtca	97	54.237	ENSCCAG00000021844	RTCA	98	55.455	Cebus_capucinus
ENSEBUG00000008556	rtca	97	52.329	ENSCATG00000019364	RTCA	96	52.329	Cercocebus_atys
ENSEBUG00000008556	rtca	80	53.535	ENSCLAG00000006125	RTCA	94	53.535	Chinchilla_lanigera
ENSEBUG00000008556	rtca	97	54.237	ENSCSAG00000001509	RTCA	95	54.237	Chlorocebus_sabaeus
ENSEBUG00000008556	rtca	96	55.172	ENSCHOG00000005211	RTCA	94	55.172	Choloepus_hoffmanni
ENSEBUG00000008556	rtca	94	56.560	ENSCPBG00000026658	RTCA	98	56.012	Chrysemys_picta_bellii
ENSEBUG00000008556	rtca	94	46.087	ENSCING00000007875	-	94	46.087	Ciona_intestinalis
ENSEBUG00000008556	rtca	94	44.638	ENSCSAVG00000007269	-	94	44.638	Ciona_savignyi
ENSEBUG00000008556	rtca	97	54.520	ENSCANG00000040106	RTCA	95	54.520	Colobus_angolensis_palliatus
ENSEBUG00000008556	rtca	66	53.150	ENSCGRG00001013163	Rtca	80	53.150	Cricetulus_griseus_chok1gshd
ENSEBUG00000008556	rtca	94	51.170	ENSCSEG00000000530	rtca	83	61.538	Cynoglossus_semilaevis
ENSEBUG00000008556	rtca	95	41.040	ENSCVAG00000021809	rtca	94	41.040	Cyprinodon_variegatus
ENSEBUG00000008556	rtca	96	54.755	ENSDARG00000002215	rtca	95	54.755	Danio_rerio
ENSEBUG00000008556	rtca	97	55.650	ENSDNOG00000000456	RTCA	95	55.650	Dasypus_novemcinctus
ENSEBUG00000008556	rtca	97	55.367	ENSDORG00000005448	Rtca	95	55.367	Dipodomys_ordii
ENSEBUG00000008556	rtca	92	37.015	FBgn0025630	Rtca	92	37.015	Drosophila_melanogaster
ENSEBUG00000008556	rtca	97	55.085	ENSEASG00005015926	RTCA	95	55.085	Equus_asinus_asinus
ENSEBUG00000008556	rtca	97	55.085	ENSECAG00000019831	RTCA	95	55.085	Equus_caballus
ENSEBUG00000008556	rtca	92	53.314	ENSEEUG00000001165	RTCA	100	53.314	Erinaceus_europaeus
ENSEBUG00000008556	rtca	95	52.601	ENSELUG00000003741	rtca	95	52.601	Esox_lucius
ENSEBUG00000008556	rtca	97	55.085	ENSFCAG00000024460	RTCA	95	55.085	Felis_catus
ENSEBUG00000008556	rtca	90	57.357	ENSFALG00000002443	RTCA	88	57.357	Ficedula_albicollis
ENSEBUG00000008556	rtca	97	54.520	ENSFDAG00000012070	-	95	54.520	Fukomys_damarensis
ENSEBUG00000008556	rtca	93	42.331	ENSFDAG00000016084	-	93	42.331	Fukomys_damarensis
ENSEBUG00000008556	rtca	60	43.096	ENSFHEG00000002868	rtca	90	43.096	Fundulus_heteroclitus
ENSEBUG00000008556	rtca	95	51.156	ENSGMOG00000013264	rtca	95	51.156	Gadus_morhua
ENSEBUG00000008556	rtca	94	55.556	ENSGALG00000005277	RTCA	93	55.556	Gallus_gallus
ENSEBUG00000008556	rtca	94	52.047	ENSGAFG00000011853	rtca	93	52.047	Gambusia_affinis
ENSEBUG00000008556	rtca	95	51.156	ENSGACG00000013497	rtca	95	51.156	Gasterosteus_aculeatus
ENSEBUG00000008556	rtca	77	52.414	ENSGAGG00000023306	RTCA	98	52.414	Gopherus_agassizii
ENSEBUG00000008556	rtca	97	54.237	ENSGGOG00000009546	-	95	54.237	Gorilla_gorilla
ENSEBUG00000008556	rtca	97	53.955	ENSGGOG00000044018	-	95	53.955	Gorilla_gorilla
ENSEBUG00000008556	rtca	95	52.616	ENSHBUG00000002114	rtca	93	52.616	Haplochromis_burtoni
ENSEBUG00000008556	rtca	97	54.802	ENSHGLG00000002617	RTCA	95	54.802	Heterocephalus_glaber_female
ENSEBUG00000008556	rtca	97	54.802	ENSHGLG00100006056	RTCA	95	54.802	Heterocephalus_glaber_male
ENSEBUG00000008556	rtca	92	48.810	ENSHCOG00000020628	rtca	82	48.810	Hippocampus_comes
ENSEBUG00000008556	rtca	96	53.161	ENSIPUG00000024803	rtca	95	53.161	Ictalurus_punctatus
ENSEBUG00000008556	rtca	96	52.266	ENSSTOG00000033099	-	94	52.266	Ictidomys_tridecemlineatus
ENSEBUG00000008556	rtca	97	49.718	ENSSTOG00000013528	-	95	49.718	Ictidomys_tridecemlineatus
ENSEBUG00000008556	rtca	97	47.385	ENSJJAG00000016178	Rtca	94	47.385	Jaculus_jaculus
ENSEBUG00000008556	rtca	94	54.678	ENSKMAG00000006651	rtca	93	54.678	Kryptolebias_marmoratus
ENSEBUG00000008556	rtca	96	52.738	ENSLBEG00000028971	rtca	95	52.738	Labrus_bergylta
ENSEBUG00000008556	rtca	80	52.013	ENSLBEG00000002448	-	93	52.013	Labrus_bergylta
ENSEBUG00000008556	rtca	96	55.714	ENSLACG00000013666	RTCA	95	55.714	Latimeria_chalumnae
ENSEBUG00000008556	rtca	96	51.862	ENSLOCG00000000093	rtca	95	51.862	Lepisosteus_oculatus
ENSEBUG00000008556	rtca	97	54.520	ENSLAFG00000001473	RTCA	95	54.520	Loxodonta_africana
ENSEBUG00000008556	rtca	97	54.237	ENSMFAG00000034132	RTCA	95	54.237	Macaca_fascicularis
ENSEBUG00000008556	rtca	97	53.955	ENSMMUG00000019105	RTCA	95	53.955	Macaca_mulatta
ENSEBUG00000008556	rtca	78	52.218	ENSMNEG00000037163	RTCA	94	52.218	Macaca_nemestrina
ENSEBUG00000008556	rtca	81	46.844	ENSMLEG00000042151	RTCA	89	46.844	Mandrillus_leucophaeus
ENSEBUG00000008556	rtca	95	53.488	ENSMAMG00000016536	rtca	94	53.488	Mastacembelus_armatus
ENSEBUG00000008556	rtca	95	52.616	ENSMZEG00005017945	rtca	93	52.616	Maylandia_zebra
ENSEBUG00000008556	rtca	81	55.150	ENSMGAG00000006892	RTCA	94	55.150	Meleagris_gallopavo
ENSEBUG00000008556	rtca	97	56.215	ENSMAUG00000008488	Rtca	95	56.215	Mesocricetus_auratus
ENSEBUG00000008556	rtca	78	53.584	ENSMICG00000008643	RTCA	94	53.584	Microcebus_murinus
ENSEBUG00000008556	rtca	97	56.215	ENSMOCG00000016660	Rtca	95	56.215	Microtus_ochrogaster
ENSEBUG00000008556	rtca	77	51.568	ENSMMOG00000007750	rtca	93	51.568	Mola_mola
ENSEBUG00000008556	rtca	97	57.345	ENSMODG00000003557	RTCA	95	57.345	Monodelphis_domestica
ENSEBUG00000008556	rtca	95	53.198	ENSMALG00000020844	rtca	94	53.198	Monopterus_albus
ENSEBUG00000008556	rtca	97	55.932	MGP_CAROLIEiJ_G0025565	Rtca	96	60.360	Mus_caroli
ENSEBUG00000008556	rtca	97	55.650	ENSMUSG00000000339	Rtca	96	60.360	Mus_musculus
ENSEBUG00000008556	rtca	97	55.932	MGP_PahariEiJ_G0027011	Rtca	96	60.360	Mus_pahari
ENSEBUG00000008556	rtca	97	55.650	MGP_SPRETEiJ_G0026515	Rtca	96	60.360	Mus_spretus
ENSEBUG00000008556	rtca	97	54.802	ENSMPUG00000012119	RTCA	95	54.802	Mustela_putorius_furo
ENSEBUG00000008556	rtca	97	55.775	ENSMLUG00000009922	RTCA	95	55.775	Myotis_lucifugus
ENSEBUG00000008556	rtca	97	54.520	ENSNGAG00000011540	Rtca	95	54.520	Nannospalax_galili
ENSEBUG00000008556	rtca	95	52.616	ENSNBRG00000003062	rtca	93	52.616	Neolamprologus_brichardi
ENSEBUG00000008556	rtca	97	53.955	ENSNLEG00000031426	RTCA	95	53.955	Nomascus_leucogenys
ENSEBUG00000008556	rtca	66	48.425	ENSOPRG00000012092	RTCA	66	48.425	Ochotona_princeps
ENSEBUG00000008556	rtca	91	53.892	ENSODEG00000006990	RTCA	92	54.142	Octodon_degus
ENSEBUG00000008556	rtca	95	52.326	ENSONIG00000007753	rtca	93	52.326	Oreochromis_niloticus
ENSEBUG00000008556	rtca	81	54.305	ENSOANG00000012055	RTCA	93	54.305	Ornithorhynchus_anatinus
ENSEBUG00000008556	rtca	97	55.085	ENSOCUG00000014247	RTCA	95	55.085	Oryctolagus_cuniculus
ENSEBUG00000008556	rtca	95	53.779	ENSORLG00000013605	rtca	99	53.687	Oryzias_latipes
ENSEBUG00000008556	rtca	95	54.070	ENSORLG00020001904	rtca	95	53.982	Oryzias_latipes_hni
ENSEBUG00000008556	rtca	57	31.351	ENSORLG00020012211	rcl1	52	31.351	Oryzias_latipes_hni
ENSEBUG00000008556	rtca	95	54.070	ENSORLG00015021064	rtca	94	54.070	Oryzias_latipes_hsok
ENSEBUG00000008556	rtca	94	52.632	ENSOMEG00000000756	rtca	93	52.632	Oryzias_melastigma
ENSEBUG00000008556	rtca	97	49.311	ENSOGAG00000005627	RTCA	95	49.311	Otolemur_garnettii
ENSEBUG00000008556	rtca	81	53.333	ENSOARG00000018122	RTCA	94	53.333	Ovis_aries
ENSEBUG00000008556	rtca	97	52.055	ENSPPAG00000035119	RTCA	96	52.055	Pan_paniscus
ENSEBUG00000008556	rtca	97	55.085	ENSPPRG00000000350	RTCA	95	55.085	Panthera_pardus
ENSEBUG00000008556	rtca	97	54.802	ENSPTIG00000012816	RTCA	95	54.802	Panthera_tigris_altaica
ENSEBUG00000008556	rtca	97	52.329	ENSPTRG00000001004	RTCA	96	52.329	Pan_troglodytes
ENSEBUG00000008556	rtca	97	54.520	ENSPANG00000000346	RTCA	95	54.520	Papio_anubis
ENSEBUG00000008556	rtca	96	53.736	ENSPKIG00000001653	rtca	95	53.736	Paramormyrops_kingsleyae
ENSEBUG00000008556	rtca	94	56.268	ENSPSIG00000011408	RTCA	93	56.268	Pelodiscus_sinensis
ENSEBUG00000008556	rtca	97	56.780	ENSPEMG00000018582	Rtca	95	56.780	Peromyscus_maniculatus_bairdii
ENSEBUG00000008556	rtca	96	43.944	ENSPMAG00000009110	rtca	96	43.944	Petromyzon_marinus
ENSEBUG00000008556	rtca	97	57.062	ENSPCIG00000007684	RTCA	95	57.062	Phascolarctos_cinereus
ENSEBUG00000008556	rtca	94	52.339	ENSPFOG00000004824	rtca	93	52.339	Poecilia_formosa
ENSEBUG00000008556	rtca	94	52.339	ENSPLAG00000011753	rtca	93	52.339	Poecilia_latipinna
ENSEBUG00000008556	rtca	94	52.339	ENSPMEG00000020469	rtca	93	52.339	Poecilia_mexicana
ENSEBUG00000008556	rtca	94	52.924	ENSPREG00000001365	rtca	93	52.924	Poecilia_reticulata
ENSEBUG00000008556	rtca	97	53.672	ENSPPYG00000001115	RTCA	95	53.672	Pongo_abelii
ENSEBUG00000008556	rtca	97	51.412	ENSPCAG00000005076	RTCA	95	51.412	Procavia_capensis
ENSEBUG00000008556	rtca	97	55.085	ENSPCOG00000005603	RTCA	92	65.306	Propithecus_coquereli
ENSEBUG00000008556	rtca	97	53.022	ENSPVAG00000009478	RTCA	96	53.022	Pteropus_vampyrus
ENSEBUG00000008556	rtca	95	52.616	ENSPNYG00000004722	rtca	93	52.616	Pundamilia_nyererei
ENSEBUG00000008556	rtca	96	53.736	ENSPNAG00000022270	rtca	95	53.736	Pygocentrus_nattereri
ENSEBUG00000008556	rtca	97	55.367	ENSRNOG00000014575	Rtca	95	55.367	Rattus_norvegicus
ENSEBUG00000008556	rtca	97	52.603	ENSRBIG00000041180	RTCA	96	52.603	Rhinopithecus_bieti
ENSEBUG00000008556	rtca	97	54.237	ENSRROG00000024929	RTCA	95	54.237	Rhinopithecus_roxellana
ENSEBUG00000008556	rtca	97	54.520	ENSSBOG00000028626	RTCA	95	54.520	Saimiri_boliviensis_boliviensis
ENSEBUG00000008556	rtca	97	57.627	ENSSHAG00000001758	RTCA	95	57.627	Sarcophilus_harrisii
ENSEBUG00000008556	rtca	93	51.032	ENSSMAG00000014680	rtca	91	51.032	Scophthalmus_maximus
ENSEBUG00000008556	rtca	94	52.478	ENSSDUG00000015585	rtca	92	52.478	Seriola_dumerili
ENSEBUG00000008556	rtca	92	52.994	ENSSLDG00000018985	rtca	90	52.994	Seriola_lalandi_dorsalis
ENSEBUG00000008556	rtca	81	52.649	ENSSARG00000013993	RTCA	95	52.649	Sorex_araneus
ENSEBUG00000008556	rtca	95	52.616	ENSSPAG00000011938	rtca	93	52.616	Stegastes_partitus
ENSEBUG00000008556	rtca	97	54.520	ENSSSCG00000006865	RTCA	95	54.520	Sus_scrofa
ENSEBUG00000008556	rtca	94	57.018	ENSTGUG00000005154	RTCA	93	57.018	Taeniopygia_guttata
ENSEBUG00000008556	rtca	95	53.488	ENSTRUG00000008799	rtca	94	53.488	Takifugu_rubripes
ENSEBUG00000008556	rtca	95	52.907	ENSTNIG00000004725	rtca	94	52.907	Tetraodon_nigroviridis
ENSEBUG00000008556	rtca	97	52.055	ENSTTRG00000015327	RTCA	96	52.055	Tursiops_truncatus
ENSEBUG00000008556	rtca	92	55.655	ENSUAMG00000017265	RTCA	94	55.655	Ursus_americanus
ENSEBUG00000008556	rtca	97	54.520	ENSUMAG00000007881	RTCA	95	54.520	Ursus_maritimus
ENSEBUG00000008556	rtca	63	64.151	ENSVPAG00000001039	RTCA	53	64.151	Vicugna_pacos
ENSEBUG00000008556	rtca	97	53.955	ENSVVUG00000022041	RTCA	64	53.955	Vulpes_vulpes
ENSEBUG00000008556	rtca	95	45.584	ENSXETG00000031661	RTCA	95	45.597	Xenopus_tropicalis
ENSEBUG00000008556	rtca	94	48.494	ENSXCOG00000008002	rtca	93	48.494	Xiphophorus_couchianus
ENSEBUG00000008556	rtca	94	52.339	ENSXMAG00000005482	rtca	93	52.339	Xiphophorus_maculatus