EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000008575 (Gene tree)
Gene ID: -
Gene Symbol: pop4 (1 of many)
Alias: zgc:110597
Full Name: POP4 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 3037 bases
Position: chrFYBX02010311.1:1200813-1203849
Accession: ZDB-GENE-050522-505
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000013584	UPF0086	PF01868.16	1.8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000014160	-	624	-	ENSEBUP00000013584	207 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000008575's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000008575's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000008575	pop4	97	77.922	ENSEBUG00000010447	pop4	90	79.221
ENSEBUG00000008575	pop4	100	91.441	ENSEBUG00000004305	pop4	100	91.441

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000008575	pop4	100	44.344	ENSG00000105171	POP4	91	56.322	Homo_sapiens
ENSEBUG00000008575	pop4	100	37.557	ENSAMEG00000003172	-	100	37.557	Ailuropoda_melanoleuca
ENSEBUG00000008575	pop4	98	41.475	ENSAMEG00000018329	-	98	41.475	Ailuropoda_melanoleuca
ENSEBUG00000008575	pop4	99	41.096	ENSACIG00000008358	pop4	99	41.096	Amphilophus_citrinellus
ENSEBUG00000008575	pop4	89	42.000	ENSAOCG00000010116	pop4	97	42.000	Amphiprion_ocellaris
ENSEBUG00000008575	pop4	92	41.262	ENSAPEG00000002829	pop4	86	41.262	Amphiprion_percula
ENSEBUG00000008575	pop4	92	42.233	ENSATEG00000013028	pop4	92	42.233	Anabas_testudineus
ENSEBUG00000008575	pop4	91	44.335	ENSAPLG00000014051	POP4	98	44.335	Anas_platyrhynchos
ENSEBUG00000008575	pop4	98	44.700	ENSANAG00000020295	POP4	98	45.161	Aotus_nancymaae
ENSEBUG00000008575	pop4	98	41.553	ENSACLG00000000526	pop4	98	41.553	Astatotilapia_calliptera
ENSEBUG00000008575	pop4	100	42.342	ENSAMXG00000002899	pop4	100	42.342	Astyanax_mexicanus
ENSEBUG00000008575	pop4	100	42.534	ENSBTAG00000002223	POP4	100	42.534	Bos_taurus
ENSEBUG00000008575	pop4	98	44.037	ENSCJAG00000046750	POP4	97	47.701	Callithrix_jacchus
ENSEBUG00000008575	pop4	79	45.506	ENSCAFG00000007630	POP4	98	45.506	Canis_familiaris
ENSEBUG00000008575	pop4	100	42.986	ENSCHIG00000016743	POP4	100	42.986	Capra_hircus
ENSEBUG00000008575	pop4	100	42.081	ENSTSYG00000003488	POP4	100	42.081	Carlito_syrichta
ENSEBUG00000008575	pop4	98	36.408	ENSCAPG00000011105	POP4	99	36.408	Cavia_aperea
ENSEBUG00000008575	pop4	100	42.986	ENSCPOG00000002992	POP4	100	43.439	Cavia_porcellus
ENSEBUG00000008575	pop4	98	46.544	ENSCCAG00000020285	-	98	46.544	Cebus_capucinus
ENSEBUG00000008575	pop4	98	38.710	ENSCCAG00000034244	-	98	38.710	Cebus_capucinus
ENSEBUG00000008575	pop4	100	45.249	ENSCATG00000036022	POP4	91	56.322	Cercocebus_atys
ENSEBUG00000008575	pop4	100	43.439	ENSCLAG00000013162	POP4	100	43.891	Chinchilla_lanigera
ENSEBUG00000008575	pop4	98	45.622	ENSCSAG00000004868	POP4	99	46.083	Chlorocebus_sabaeus
ENSEBUG00000008575	pop4	80	55.263	ENSCHOG00000002071	POP4	77	55.263	Choloepus_hoffmanni
ENSEBUG00000008575	pop4	100	41.629	ENSCPBG00000016132	POP4	100	41.629	Chrysemys_picta_bellii
ENSEBUG00000008575	pop4	84	30.481	ENSCING00000023871	-	94	30.481	Ciona_intestinalis
ENSEBUG00000008575	pop4	88	47.208	ENSCANG00000005924	POP4	97	47.716	Colobus_angolensis_palliatus
ENSEBUG00000008575	pop4	100	45.000	ENSCGRG00001017185	Pop4	100	45.000	Cricetulus_griseus_chok1gshd
ENSEBUG00000008575	pop4	100	45.000	ENSCGRG00000008155	Pop4	100	45.000	Cricetulus_griseus_crigri
ENSEBUG00000008575	pop4	66	44.898	ENSCSEG00000002946	pop4	67	44.898	Cynoglossus_semilaevis
ENSEBUG00000008575	pop4	99	35.071	ENSCVAG00000018602	POP4	95	35.071	Cyprinodon_variegatus
ENSEBUG00000008575	pop4	99	39.631	ENSDARG00000101472	pop4	99	39.631	Danio_rerio
ENSEBUG00000008575	pop4	98	43.779	ENSDNOG00000047663	POP4	87	43.779	Dasypus_novemcinctus
ENSEBUG00000008575	pop4	76	41.279	ENSDORG00000008577	Pop4	99	41.279	Dipodomys_ordii
ENSEBUG00000008575	pop4	99	35.780	ENSETEG00000003607	POP4	100	35.780	Echinops_telfairi
ENSEBUG00000008575	pop4	100	51.923	ENSECAG00000020206	POP4	82	51.923	Equus_caballus
ENSEBUG00000008575	pop4	93	41.905	ENSELUG00000019812	pop4	95	41.905	Esox_lucius
ENSEBUG00000008575	pop4	100	42.081	ENSFCAG00000001619	POP4	100	42.081	Felis_catus
ENSEBUG00000008575	pop4	100	44.344	ENSFALG00000000206	POP4	98	44.796	Ficedula_albicollis
ENSEBUG00000008575	pop4	100	42.986	ENSFDAG00000017859	POP4	100	42.986	Fukomys_damarensis
ENSEBUG00000008575	pop4	67	48.980	ENSFHEG00000012745	pop4	67	48.980	Fundulus_heteroclitus
ENSEBUG00000008575	pop4	74	45.882	ENSGMOG00000000335	pop4	85	45.882	Gadus_morhua
ENSEBUG00000008575	pop4	100	41.629	ENSGALG00000041972	POP4	92	42.534	Gallus_gallus
ENSEBUG00000008575	pop4	77	33.333	ENSGAFG00000003571	pop4	97	33.333	Gambusia_affinis
ENSEBUG00000008575	pop4	92	41.748	ENSGACG00000014510	pop4	92	42.308	Gasterosteus_aculeatus
ENSEBUG00000008575	pop4	98	43.318	ENSGAGG00000024544	POP4	78	43.318	Gopherus_agassizii
ENSEBUG00000008575	pop4	98	45.161	ENSGGOG00000038346	POP4	98	45.622	Gorilla_gorilla
ENSEBUG00000008575	pop4	92	41.951	ENSHBUG00000021821	pop4	92	41.951	Haplochromis_burtoni
ENSEBUG00000008575	pop4	98	44.240	ENSHGLG00000015798	POP4	98	44.240	Heterocephalus_glaber_female
ENSEBUG00000008575	pop4	98	44.240	ENSHGLG00100009737	POP4	98	44.240	Heterocephalus_glaber_male
ENSEBUG00000008575	pop4	92	39.614	ENSHCOG00000020937	pop4	92	39.614	Hippocampus_comes
ENSEBUG00000008575	pop4	94	43.062	ENSIPUG00000013652	pop4	95	43.062	Ictalurus_punctatus
ENSEBUG00000008575	pop4	100	43.439	ENSSTOG00000011016	POP4	100	43.439	Ictidomys_tridecemlineatus
ENSEBUG00000008575	pop4	100	43.891	ENSJJAG00000013376	Pop4	100	43.891	Jaculus_jaculus
ENSEBUG00000008575	pop4	99	40.541	ENSKMAG00000012250	pop4	99	40.541	Kryptolebias_marmoratus
ENSEBUG00000008575	pop4	92	38.942	ENSLBEG00000018846	-	92	39.423	Labrus_bergylta
ENSEBUG00000008575	pop4	92	38.462	ENSLBEG00000014139	pop4	92	38.942	Labrus_bergylta
ENSEBUG00000008575	pop4	100	40.724	ENSLACG00000008581	POP4	99	41.176	Latimeria_chalumnae
ENSEBUG00000008575	pop4	99	40.367	ENSLOCG00000005597	pop4	100	40.271	Lepisosteus_oculatus
ENSEBUG00000008575	pop4	98	44.240	ENSLAFG00000000084	POP4	98	44.700	Loxodonta_africana
ENSEBUG00000008575	pop4	100	44.796	ENSMFAG00000029606	POP4	100	45.249	Macaca_fascicularis
ENSEBUG00000008575	pop4	100	44.595	ENSMMUG00000017424	POP4	100	45.045	Macaca_mulatta
ENSEBUG00000008575	pop4	100	44.595	ENSMNEG00000031374	POP4	100	45.045	Macaca_nemestrina
ENSEBUG00000008575	pop4	100	44.796	ENSMLEG00000043454	POP4	100	45.249	Mandrillus_leucophaeus
ENSEBUG00000008575	pop4	67	50.000	ENSMAMG00000011716	pop4	99	41.704	Mastacembelus_armatus
ENSEBUG00000008575	pop4	98	41.553	ENSMZEG00005002360	pop4	98	41.553	Maylandia_zebra
ENSEBUG00000008575	pop4	99	42.273	ENSMGAG00000005337	POP4	98	42.727	Meleagris_gallopavo
ENSEBUG00000008575	pop4	100	44.395	ENSMAUG00000020110	Pop4	100	43.439	Mesocricetus_auratus
ENSEBUG00000008575	pop4	98	44.700	ENSMICG00000035730	POP4	97	45.161	Microcebus_murinus
ENSEBUG00000008575	pop4	99	38.710	ENSMMOG00000015321	pop4	92	40.594	Mola_mola
ENSEBUG00000008575	pop4	98	41.014	ENSMODG00000029406	POP4	94	41.014	Monodelphis_domestica
ENSEBUG00000008575	pop4	92	41.176	ENSMALG00000012571	pop4	92	42.157	Monopterus_albus
ENSEBUG00000008575	pop4	100	45.495	MGP_CAROLIEiJ_G0029600	Pop4	100	45.946	Mus_caroli
ENSEBUG00000008575	pop4	100	46.429	ENSMUSG00000030423	Pop4	100	46.429	Mus_musculus
ENSEBUG00000008575	pop4	100	45.909	MGP_SPRETEiJ_G0030699	Pop4	100	45.909	Mus_spretus
ENSEBUG00000008575	pop4	100	42.986	ENSMPUG00000008041	-	100	42.986	Mustela_putorius_furo
ENSEBUG00000008575	pop4	98	38.710	ENSMPUG00000008063	-	98	38.991	Mustela_putorius_furo
ENSEBUG00000008575	pop4	98	34.404	ENSMLUG00000010774	POP4	98	35.780	Myotis_lucifugus
ENSEBUG00000008575	pop4	55	44.000	ENSMEUG00000003636	-	100	44.000	Notamacropus_eugenii
ENSEBUG00000008575	pop4	90	46.000	ENSOPRG00000004736	POP4	99	46.000	Ochotona_princeps
ENSEBUG00000008575	pop4	98	43.779	ENSODEG00000013025	POP4	100	44.601	Octodon_degus
ENSEBUG00000008575	pop4	98	41.284	ENSONIG00000003458	pop4	96	41.284	Oreochromis_niloticus
ENSEBUG00000008575	pop4	100	43.891	ENSOCUG00000015974	POP4	100	43.891	Oryctolagus_cuniculus
ENSEBUG00000008575	pop4	89	40.796	ENSORLG00000020317	pop4	90	40.796	Oryzias_latipes
ENSEBUG00000008575	pop4	92	40.291	ENSORLG00015011624	pop4	92	40.291	Oryzias_latipes_hsok
ENSEBUG00000008575	pop4	92	39.806	ENSOMEG00000002538	pop4	92	39.806	Oryzias_melastigma
ENSEBUG00000008575	pop4	99	44.091	ENSOGAG00000011168	POP4	99	44.545	Otolemur_garnettii
ENSEBUG00000008575	pop4	100	42.793	ENSOARG00000004041	POP4	100	42.793	Ovis_aries
ENSEBUG00000008575	pop4	100	44.344	ENSPPAG00000040372	POP4	100	44.796	Pan_paniscus
ENSEBUG00000008575	pop4	100	42.081	ENSPPRG00000010502	POP4	100	42.081	Panthera_pardus
ENSEBUG00000008575	pop4	100	42.081	ENSPTIG00000016598	POP4	100	42.081	Panthera_tigris_altaica
ENSEBUG00000008575	pop4	100	44.344	ENSPTRG00000010779	POP4	100	44.796	Pan_troglodytes
ENSEBUG00000008575	pop4	100	44.796	ENSPANG00000008546	POP4	100	45.249	Papio_anubis
ENSEBUG00000008575	pop4	88	42.500	ENSPKIG00000004468	pop4	86	43.655	Paramormyrops_kingsleyae
ENSEBUG00000008575	pop4	100	42.534	ENSPSIG00000015690	POP4	100	44.335	Pelodiscus_sinensis
ENSEBUG00000008575	pop4	88	40.594	ENSPMGG00000008608	pop4	96	41.089	Periophthalmus_magnuspinnatus
ENSEBUG00000008575	pop4	99	42.922	ENSPEMG00000014034	-	95	42.922	Peromyscus_maniculatus_bairdii
ENSEBUG00000008575	pop4	99	41.148	ENSPEMG00000019982	-	100	41.148	Peromyscus_maniculatus_bairdii
ENSEBUG00000008575	pop4	66	53.741	ENSPMAG00000006265	pop4	78	52.597	Petromyzon_marinus
ENSEBUG00000008575	pop4	98	42.857	ENSPCIG00000024738	POP4	94	42.857	Phascolarctos_cinereus
ENSEBUG00000008575	pop4	99	37.727	ENSPFOG00000000925	pop4	99	37.727	Poecilia_formosa
ENSEBUG00000008575	pop4	99	37.273	ENSPLAG00000003161	pop4	99	37.273	Poecilia_latipinna
ENSEBUG00000008575	pop4	99	37.727	ENSPMEG00000002475	pop4	99	37.727	Poecilia_mexicana
ENSEBUG00000008575	pop4	99	37.727	ENSPREG00000022403	pop4	93	37.727	Poecilia_reticulata
ENSEBUG00000008575	pop4	100	44.344	ENSPPYG00000009805	POP4	100	44.796	Pongo_abelii
ENSEBUG00000008575	pop4	99	44.292	ENSPCAG00000007737	POP4	99	45.000	Procavia_capensis
ENSEBUG00000008575	pop4	100	43.439	ENSPCOG00000018055	POP4	100	43.439	Propithecus_coquereli
ENSEBUG00000008575	pop4	100	43.891	ENSPVAG00000006069	POP4	100	43.891	Pteropus_vampyrus
ENSEBUG00000008575	pop4	92	42.439	ENSPNYG00000020038	pop4	92	42.439	Pundamilia_nyererei
ENSEBUG00000008575	pop4	95	40.476	ENSPNAG00000005591	pop4	95	40.476	Pygocentrus_nattereri
ENSEBUG00000008575	pop4	100	45.495	ENSRNOG00000027646	Pop4	100	45.946	Rattus_norvegicus
ENSEBUG00000008575	pop4	76	44.186	ENSRBIG00000044769	POP4	89	44.767	Rhinopithecus_bieti
ENSEBUG00000008575	pop4	100	44.796	ENSRROG00000028903	POP4	100	45.249	Rhinopithecus_roxellana
ENSEBUG00000008575	pop4	98	46.544	ENSSBOG00000032445	POP4	98	46.544	Saimiri_boliviensis_boliviensis
ENSEBUG00000008575	pop4	98	41.014	ENSSHAG00000016888	POP4	98	41.014	Sarcophilus_harrisii
ENSEBUG00000008575	pop4	96	42.925	ENSSFOG00015014556	pop4	95	42.925	Scleropages_formosus
ENSEBUG00000008575	pop4	92	41.262	ENSSMAG00000016611	pop4	96	41.262	Scophthalmus_maximus
ENSEBUG00000008575	pop4	92	40.777	ENSSDUG00000019865	pop4	82	40.777	Seriola_dumerili
ENSEBUG00000008575	pop4	92	42.233	ENSSLDG00000001763	pop4	92	42.233	Seriola_lalandi_dorsalis
ENSEBUG00000008575	pop4	98	42.857	ENSSARG00000004748	POP4	99	42.857	Sorex_araneus
ENSEBUG00000008575	pop4	92	41.748	ENSSPAG00000014364	pop4	92	41.748	Stegastes_partitus
ENSEBUG00000008575	pop4	100	42.081	ENSSSCG00000002854	POP4	100	42.081	Sus_scrofa
ENSEBUG00000008575	pop4	89	44.949	ENSTGUG00000008953	POP4	99	45.960	Taeniopygia_guttata
ENSEBUG00000008575	pop4	65	50.345	ENSTNIG00000006401	pop4	100	42.029	Tetraodon_nigroviridis
ENSEBUG00000008575	pop4	100	43.694	ENSTBEG00000002194	POP4	100	43.694	Tupaia_belangeri
ENSEBUG00000008575	pop4	100	42.986	ENSTTRG00000005882	POP4	100	42.986	Tursiops_truncatus
ENSEBUG00000008575	pop4	100	41.629	ENSUAMG00000003049	-	100	41.629	Ursus_americanus
ENSEBUG00000008575	pop4	100	41.629	ENSUMAG00000007522	-	100	41.629	Ursus_maritimus
ENSEBUG00000008575	pop4	91	44.335	ENSVVUG00000016876	-	71	44.335	Vulpes_vulpes
ENSEBUG00000008575	pop4	98	41.204	ENSXETG00000017598	pop4	98	41.204	Xenopus_tropicalis
ENSEBUG00000008575	pop4	93	40.686	ENSXCOG00000017695	pop4	83	40.686	Xiphophorus_couchianus
ENSEBUG00000008575	pop4	93	40.686	ENSXMAG00000013862	pop4	83	40.686	Xiphophorus_maculatus