EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000008767 (Gene tree)
Gene ID: -
Gene Symbol: rpusd1
Alias: fe26f08|wu:fe26f08|zgc:153465
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 84097 bases
Position: chrFYBX02010523.1:1503547-1587643
Accession: ZDB-GENE-060929-444
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000013901	PseudoU_synth_2	PF00849.22	7.7e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000014477	-	3233	-	ENSEBUP00000013901	329 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000008767's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000008767's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000008767	rpusd1	94	46.154	ENSG00000007376	RPUSD1	99	48.901	Homo_sapiens
ENSEBUG00000008767	rpusd1	92	43.871	ENSAPOG00000022221	rpusd1	96	44.695	Acanthochromis_polyacanthus
ENSEBUG00000008767	rpusd1	93	46.278	ENSAMEG00000007461	RPUSD1	97	46.278	Ailuropoda_melanoleuca
ENSEBUG00000008767	rpusd1	85	48.582	ENSACIG00000015863	rpusd1	96	45.541	Amphilophus_citrinellus
ENSEBUG00000008767	rpusd1	79	50.575	ENSAOCG00000021975	rpusd1	93	45.687	Amphiprion_ocellaris
ENSEBUG00000008767	rpusd1	79	50.958	ENSAPEG00000001316	rpusd1	93	46.006	Amphiprion_percula
ENSEBUG00000008767	rpusd1	79	51.724	ENSATEG00000002984	rpusd1	96	46.006	Anabas_testudineus
ENSEBUG00000008767	rpusd1	70	46.667	ENSAPLG00000012316	RPUSD1	99	46.667	Anas_platyrhynchos
ENSEBUG00000008767	rpusd1	93	47.896	ENSACAG00000008953	RPUSD1	98	47.896	Anolis_carolinensis
ENSEBUG00000008767	rpusd1	94	45.231	ENSANAG00000024709	RPUSD1	99	45.846	Aotus_nancymaae
ENSEBUG00000008767	rpusd1	79	52.490	ENSACLG00000013692	rpusd1	96	46.032	Astatotilapia_calliptera
ENSEBUG00000008767	rpusd1	92	47.115	ENSAMXG00000019802	rpusd1	97	47.115	Astyanax_mexicanus
ENSEBUG00000008767	rpusd1	94	46.106	ENSBTAG00000000179	RPUSD1	99	46.106	Bos_taurus
ENSEBUG00000008767	rpusd1	94	44.681	ENSCJAG00000012253	RPUSD1	99	44.681	Callithrix_jacchus
ENSEBUG00000008767	rpusd1	93	46.602	ENSCAFG00000019614	RPUSD1	97	46.602	Canis_familiaris
ENSEBUG00000008767	rpusd1	93	46.602	ENSCAFG00020008891	RPUSD1	97	46.602	Canis_lupus_dingo
ENSEBUG00000008767	rpusd1	94	45.342	ENSCHIG00000012872	RPUSD1	99	45.342	Capra_hircus
ENSEBUG00000008767	rpusd1	94	46.032	ENSTSYG00000036934	RPUSD1	99	46.032	Carlito_syrichta
ENSEBUG00000008767	rpusd1	94	47.022	ENSCAPG00000014219	RPUSD1	99	47.022	Cavia_aperea
ENSEBUG00000008767	rpusd1	94	47.022	ENSCPOG00000034604	RPUSD1	99	47.022	Cavia_porcellus
ENSEBUG00000008767	rpusd1	94	44.923	ENSCCAG00000034385	RPUSD1	99	45.846	Cebus_capucinus
ENSEBUG00000008767	rpusd1	94	46.154	ENSCATG00000042983	RPUSD1	99	46.154	Cercocebus_atys
ENSEBUG00000008767	rpusd1	94	46.708	ENSCLAG00000013966	RPUSD1	99	46.708	Chinchilla_lanigera
ENSEBUG00000008767	rpusd1	94	46.462	ENSCSAG00000012121	RPUSD1	99	46.769	Chlorocebus_sabaeus
ENSEBUG00000008767	rpusd1	93	46.835	ENSCPBG00000021101	RPUSD1	99	46.835	Chrysemys_picta_bellii
ENSEBUG00000008767	rpusd1	82	50.000	ENSCANG00000028576	RPUSD1	92	50.000	Colobus_angolensis_palliatus
ENSEBUG00000008767	rpusd1	94	46.349	ENSCGRG00001014253	Rpusd1	99	46.349	Cricetulus_griseus_chok1gshd
ENSEBUG00000008767	rpusd1	94	46.349	ENSCGRG00000017995	Rpusd1	99	46.349	Cricetulus_griseus_crigri
ENSEBUG00000008767	rpusd1	92	49.675	ENSCSEG00000018512	rpusd1	97	49.675	Cynoglossus_semilaevis
ENSEBUG00000008767	rpusd1	92	46.429	ENSCVAG00000022746	rpusd1	96	46.429	Cyprinodon_variegatus
ENSEBUG00000008767	rpusd1	93	48.039	ENSDARG00000060192	rpusd1	98	48.039	Danio_rerio
ENSEBUG00000008767	rpusd1	94	47.040	ENSDNOG00000003721	RPUSD1	99	47.531	Dasypus_novemcinctus
ENSEBUG00000008767	rpusd1	94	46.519	ENSDORG00000026656	Rpusd1	99	46.519	Dipodomys_ordii
ENSEBUG00000008767	rpusd1	94	45.122	ENSEASG00005018421	RPUSD1	75	45.921	Equus_asinus_asinus
ENSEBUG00000008767	rpusd1	84	49.275	ENSELUG00000014307	rpusd1	86	45.833	Esox_lucius
ENSEBUG00000008767	rpusd1	93	47.097	ENSFCAG00000010359	RPUSD1	97	47.097	Felis_catus
ENSEBUG00000008767	rpusd1	93	46.926	ENSFALG00000003211	RPUSD1	98	46.926	Ficedula_albicollis
ENSEBUG00000008767	rpusd1	94	46.708	ENSFDAG00000013398	RPUSD1	99	46.708	Fukomys_damarensis
ENSEBUG00000008767	rpusd1	92	45.981	ENSFHEG00000004736	rpusd1	96	46.945	Fundulus_heteroclitus
ENSEBUG00000008767	rpusd1	79	52.490	ENSGMOG00000010756	rpusd1	97	48.254	Gadus_morhua
ENSEBUG00000008767	rpusd1	93	45.426	ENSGALG00000005315	RPUSD1	99	45.426	Gallus_gallus
ENSEBUG00000008767	rpusd1	92	46.753	ENSGAFG00000009886	rpusd1	96	46.753	Gambusia_affinis
ENSEBUG00000008767	rpusd1	79	52.874	ENSGACG00000014276	rpusd1	96	46.965	Gasterosteus_aculeatus
ENSEBUG00000008767	rpusd1	93	46.708	ENSGAGG00000004181	RPUSD1	99	46.708	Gopherus_agassizii
ENSEBUG00000008767	rpusd1	94	45.846	ENSGGOG00000013997	RPUSD1	99	45.593	Gorilla_gorilla
ENSEBUG00000008767	rpusd1	79	52.490	ENSHBUG00000023728	rpusd1	96	46.032	Haplochromis_burtoni
ENSEBUG00000008767	rpusd1	94	46.708	ENSHGLG00000002595	RPUSD1	99	46.708	Heterocephalus_glaber_female
ENSEBUG00000008767	rpusd1	94	46.708	ENSHGLG00100014303	RPUSD1	99	46.708	Heterocephalus_glaber_male
ENSEBUG00000008767	rpusd1	91	48.515	ENSHCOG00000002390	rpusd1	96	48.515	Hippocampus_comes
ENSEBUG00000008767	rpusd1	92	49.679	ENSIPUG00000001570	rpusd1	97	49.679	Ictalurus_punctatus
ENSEBUG00000008767	rpusd1	94	46.082	ENSSTOG00000004276	RPUSD1	99	46.082	Ictidomys_tridecemlineatus
ENSEBUG00000008767	rpusd1	94	45.886	ENSJJAG00000015696	Rpusd1	99	45.886	Jaculus_jaculus
ENSEBUG00000008767	rpusd1	92	47.078	ENSKMAG00000017287	rpusd1	96	47.078	Kryptolebias_marmoratus
ENSEBUG00000008767	rpusd1	75	54.435	ENSLBEG00000013354	RPUSD1	96	46.326	Labrus_bergylta
ENSEBUG00000008767	rpusd1	75	54.435	ENSLBEG00000022502	rpusd1	96	46.326	Labrus_bergylta
ENSEBUG00000008767	rpusd1	92	46.667	ENSLACG00000008869	RPUSD1	97	46.667	Latimeria_chalumnae
ENSEBUG00000008767	rpusd1	68	56.250	ENSLOCG00000005682	rpusd1	96	56.250	Lepisosteus_oculatus
ENSEBUG00000008767	rpusd1	94	47.452	ENSLAFG00000002115	RPUSD1	99	47.452	Loxodonta_africana
ENSEBUG00000008767	rpusd1	94	46.154	ENSMFAG00000003961	RPUSD1	99	46.462	Macaca_fascicularis
ENSEBUG00000008767	rpusd1	94	46.154	ENSMMUG00000000842	RPUSD1	99	46.462	Macaca_mulatta
ENSEBUG00000008767	rpusd1	94	46.154	ENSMNEG00000042712	RPUSD1	99	46.462	Macaca_nemestrina
ENSEBUG00000008767	rpusd1	94	46.154	ENSMLEG00000030591	RPUSD1	99	46.462	Mandrillus_leucophaeus
ENSEBUG00000008767	rpusd1	85	49.822	ENSMAMG00000004735	rpusd1	96	46.497	Mastacembelus_armatus
ENSEBUG00000008767	rpusd1	79	52.490	ENSMZEG00005003214	rpusd1	96	46.032	Maylandia_zebra
ENSEBUG00000008767	rpusd1	93	46.006	ENSMGAG00000005447	RPUSD1	99	46.006	Meleagris_gallopavo
ENSEBUG00000008767	rpusd1	80	44.981	ENSMAUG00000019998	Rpusd1	96	44.981	Mesocricetus_auratus
ENSEBUG00000008767	rpusd1	94	45.312	ENSMICG00000017561	RPUSD1	99	45.312	Microcebus_murinus
ENSEBUG00000008767	rpusd1	94	45.597	ENSMOCG00000014082	Rpusd1	99	45.141	Microtus_ochrogaster
ENSEBUG00000008767	rpusd1	75	54.435	ENSMMOG00000012569	rpusd1	93	50.542	Mola_mola
ENSEBUG00000008767	rpusd1	93	46.815	ENSMODG00000016882	RPUSD1	97	47.134	Monodelphis_domestica
ENSEBUG00000008767	rpusd1	79	52.290	ENSMALG00000017818	rpusd1	96	46.032	Monopterus_albus
ENSEBUG00000008767	rpusd1	94	46.541	MGP_CAROLIEiJ_G0021244	Rpusd1	99	46.226	Mus_caroli
ENSEBUG00000008767	rpusd1	94	45.597	ENSMUSG00000041199	Rpusd1	99	44.785	Mus_musculus
ENSEBUG00000008767	rpusd1	93	44.828	MGP_PahariEiJ_G0023562	Rpusd1	98	44.308	Mus_pahari
ENSEBUG00000008767	rpusd1	94	45.597	MGP_SPRETEiJ_G0022155	Rpusd1	99	44.785	Mus_spretus
ENSEBUG00000008767	rpusd1	95	45.253	ENSMPUG00000015897	RPUSD1	99	45.768	Mustela_putorius_furo
ENSEBUG00000008767	rpusd1	94	45.092	ENSMLUG00000001089	RPUSD1	99	44.681	Myotis_lucifugus
ENSEBUG00000008767	rpusd1	93	46.815	ENSNGAG00000003595	Rpusd1	97	46.815	Nannospalax_galili
ENSEBUG00000008767	rpusd1	92	48.026	ENSNBRG00000006457	rpusd1	96	48.026	Neolamprologus_brichardi
ENSEBUG00000008767	rpusd1	93	47.003	ENSMEUG00000016049	RPUSD1	97	47.003	Notamacropus_eugenii
ENSEBUG00000008767	rpusd1	94	42.271	ENSOPRG00000008340	RPUSD1	99	42.271	Ochotona_princeps
ENSEBUG00000008767	rpusd1	94	47.022	ENSODEG00000016945	RPUSD1	99	47.022	Octodon_degus
ENSEBUG00000008767	rpusd1	79	52.874	ENSONIG00000015672	rpusd1	97	46.984	Oreochromis_niloticus
ENSEBUG00000008767	rpusd1	93	47.742	ENSORLG00000013009	rpusd1	97	47.742	Oryzias_latipes
ENSEBUG00000008767	rpusd1	93	47.419	ENSORLG00020010382	rpusd1	97	47.419	Oryzias_latipes_hni
ENSEBUG00000008767	rpusd1	93	48.065	ENSORLG00015021354	rpusd1	97	48.065	Oryzias_latipes_hsok
ENSEBUG00000008767	rpusd1	92	48.852	ENSOMEG00000021426	rpusd1	96	48.852	Oryzias_melastigma
ENSEBUG00000008767	rpusd1	94	45.538	ENSOGAG00000003795	RPUSD1	99	45.538	Otolemur_garnettii
ENSEBUG00000008767	rpusd1	94	45.794	ENSOARG00000014254	RPUSD1	99	46.106	Ovis_aries
ENSEBUG00000008767	rpusd1	94	45.846	ENSPPAG00000034797	RPUSD1	99	45.593	Pan_paniscus
ENSEBUG00000008767	rpusd1	93	46.774	ENSPPRG00000012389	RPUSD1	97	46.774	Panthera_pardus
ENSEBUG00000008767	rpusd1	93	47.097	ENSPTIG00000008545	RPUSD1	90	47.097	Panthera_tigris_altaica
ENSEBUG00000008767	rpusd1	94	45.846	ENSPTRG00000007565	RPUSD1	99	45.593	Pan_troglodytes
ENSEBUG00000008767	rpusd1	94	46.154	ENSPANG00000024401	RPUSD1	99	46.462	Papio_anubis
ENSEBUG00000008767	rpusd1	93	50.482	ENSPKIG00000018890	rpusd1	91	49.686	Paramormyrops_kingsleyae
ENSEBUG00000008767	rpusd1	93	47.950	ENSPSIG00000013945	RPUSD1	99	47.950	Pelodiscus_sinensis
ENSEBUG00000008767	rpusd1	93	47.712	ENSPMGG00000014950	rpusd1	97	47.771	Periophthalmus_magnuspinnatus
ENSEBUG00000008767	rpusd1	94	45.283	ENSPEMG00000000497	Rpusd1	99	45.141	Peromyscus_maniculatus_bairdii
ENSEBUG00000008767	rpusd1	92	48.243	ENSPMAG00000001563	rpusd1	97	48.562	Petromyzon_marinus
ENSEBUG00000008767	rpusd1	93	47.923	ENSPCIG00000021216	-	91	47.923	Phascolarctos_cinereus
ENSEBUG00000008767	rpusd1	92	46.906	ENSPFOG00000007946	rpusd1	96	46.906	Poecilia_formosa
ENSEBUG00000008767	rpusd1	92	46.906	ENSPLAG00000011925	rpusd1	96	46.906	Poecilia_latipinna
ENSEBUG00000008767	rpusd1	92	46.254	ENSPMEG00000002910	rpusd1	96	46.254	Poecilia_mexicana
ENSEBUG00000008767	rpusd1	92	47.403	ENSPREG00000019851	rpusd1	96	47.403	Poecilia_reticulata
ENSEBUG00000008767	rpusd1	93	36.774	ENSPCAG00000002258	RPUSD1	97	36.774	Procavia_capensis
ENSEBUG00000008767	rpusd1	94	45.231	ENSPCOG00000022582	RPUSD1	99	45.231	Propithecus_coquereli
ENSEBUG00000008767	rpusd1	94	43.077	ENSPVAG00000013104	RPUSD1	99	42.945	Pteropus_vampyrus
ENSEBUG00000008767	rpusd1	79	52.490	ENSPNYG00000024076	rpusd1	96	47.855	Pundamilia_nyererei
ENSEBUG00000008767	rpusd1	92	48.366	ENSPNAG00000013806	rpusd1	97	48.366	Pygocentrus_nattereri
ENSEBUG00000008767	rpusd1	94	45.597	ENSRNOG00000023639	Rpusd1	99	45.597	Rattus_norvegicus
ENSEBUG00000008767	rpusd1	94	45.538	ENSRBIG00000030238	RPUSD1	99	45.289	Rhinopithecus_bieti
ENSEBUG00000008767	rpusd1	94	45.538	ENSRROG00000036663	RPUSD1	99	45.289	Rhinopithecus_roxellana
ENSEBUG00000008767	rpusd1	94	46.349	ENSSBOG00000033063	RPUSD1	99	47.634	Saimiri_boliviensis_boliviensis
ENSEBUG00000008767	rpusd1	93	47.923	ENSSHAG00000013500	RPUSD1	97	47.923	Sarcophilus_harrisii
ENSEBUG00000008767	rpusd1	92	47.604	ENSSFOG00015014394	rpusd1	97	47.604	Scleropages_formosus
ENSEBUG00000008767	rpusd1	92	45.367	ENSSMAG00000008045	rpusd1	89	45.687	Scophthalmus_maximus
ENSEBUG00000008767	rpusd1	79	52.107	ENSSDUG00000001829	rpusd1	93	47.284	Seriola_dumerili
ENSEBUG00000008767	rpusd1	79	52.107	ENSSLDG00000020853	rpusd1	93	47.284	Seriola_lalandi_dorsalis
ENSEBUG00000008767	rpusd1	50	60.479	ENSSARG00000011187	-	99	60.479	Sorex_araneus
ENSEBUG00000008767	rpusd1	57	44.670	ENSSPUG00000005119	-	100	44.670	Sphenodon_punctatus
ENSEBUG00000008767	rpusd1	92	46.645	ENSSPAG00000012708	rpusd1	96	47.604	Stegastes_partitus
ENSEBUG00000008767	rpusd1	94	45.846	ENSSSCG00000008000	RPUSD1	92	53.333	Sus_scrofa
ENSEBUG00000008767	rpusd1	79	50.763	ENSTGUG00000015375	RPUSD1	97	50.763	Taeniopygia_guttata
ENSEBUG00000008767	rpusd1	92	46.645	ENSTRUG00000003041	rpusd1	95	46.326	Takifugu_rubripes
ENSEBUG00000008767	rpusd1	79	51.341	ENSTNIG00000002660	rpusd1	93	50.186	Tetraodon_nigroviridis
ENSEBUG00000008767	rpusd1	94	45.706	ENSTTRG00000010167	RPUSD1	99	45.399	Tursiops_truncatus
ENSEBUG00000008767	rpusd1	93	46.278	ENSUAMG00000012736	RPUSD1	97	46.278	Ursus_americanus
ENSEBUG00000008767	rpusd1	93	46.278	ENSUMAG00000021174	RPUSD1	97	46.278	Ursus_maritimus
ENSEBUG00000008767	rpusd1	93	45.631	ENSVVUG00000012357	RPUSD1	97	45.631	Vulpes_vulpes
ENSEBUG00000008767	rpusd1	93	48.701	ENSXETG00000007184	rpusd1	97	48.701	Xenopus_tropicalis
ENSEBUG00000008767	rpusd1	92	47.403	ENSXCOG00000017930	rpusd1	96	47.403	Xiphophorus_couchianus
ENSEBUG00000008767	rpusd1	92	47.403	ENSXMAG00000024084	rpusd1	96	47.403	Xiphophorus_maculatus