EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000008798 (Gene tree)
Gene ID: -
Gene Symbol: SALL1 (1 of many)
Alias: Hsal1|TBS|ZNF794
Full Name: spalt like transcription factor 1
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 157291 bases
Position: chrFYBX02005479.1:362269-519559
Accession: 10524
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000013965	zf-C2H2	PF00096.26	6.4e-33	1	6
ENSEBUP00000013965	zf-C2H2	PF00096.26	6.4e-33	2	6
ENSEBUP00000013965	zf-C2H2	PF00096.26	6.4e-33	3	6
ENSEBUP00000013965	zf-C2H2	PF00096.26	6.4e-33	4	6
ENSEBUP00000013965	zf-C2H2	PF00096.26	6.4e-33	5	6
ENSEBUP00000013965	zf-C2H2	PF00096.26	6.4e-33	6	6
ENSEBUP00000013953	zf-C2H2	PF00096.26	1.2e-29	1	5
ENSEBUP00000013953	zf-C2H2	PF00096.26	1.2e-29	2	5
ENSEBUP00000013953	zf-C2H2	PF00096.26	1.2e-29	3	5
ENSEBUP00000013953	zf-C2H2	PF00096.26	1.2e-29	4	5
ENSEBUP00000013953	zf-C2H2	PF00096.26	1.2e-29	5	5
ENSEBUP00000013965	zf-met	PF12874.7	1e-18	1	2
ENSEBUP00000013965	zf-met	PF12874.7	1e-18	2	2
ENSEBUP00000013953	zf-met	PF12874.7	5.3e-17	1	2
ENSEBUP00000013953	zf-met	PF12874.7	5.3e-17	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000014530	SALL1 (1 of many)-201	5889	-	ENSEBUP00000013953	1287 (aa)	-	-
ENSEBUT00000014541	SALL1 (1 of many)-202	5787	-	ENSEBUP00000013965	1253 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000008798's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000008798's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000008798	SALL1	61	65.385	ENSEBUG00000011732	SALL1	97	52.381
ENSEBUG00000008798	SALL1	55	68.085	ENSEBUG00000009706	sall3b	57	68.085

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000008798	SALL1	73	43.326	ENSG00000103449	SALL1	99	36.961	Homo_sapiens
ENSEBUG00000008798	SALL1	94	36.190	ENSAPOG00000022764	sall1a	62	42.976	Acanthochromis_polyacanthus
ENSEBUG00000008798	SALL1	68	43.750	ENSAMEG00000006817	SALL1	69	42.271	Ailuropoda_melanoleuca
ENSEBUG00000008798	SALL1	67	41.761	ENSACIG00000004231	sall1a	62	43.027	Amphilophus_citrinellus
ENSEBUG00000008798	SALL1	94	36.287	ENSAOCG00000002800	sall1a	62	42.959	Amphiprion_ocellaris
ENSEBUG00000008798	SALL1	94	36.391	ENSAPEG00000010179	sall1a	62	42.959	Amphiprion_percula
ENSEBUG00000008798	SALL1	94	36.240	ENSATEG00000003006	sall1a	67	42.467	Anabas_testudineus
ENSEBUG00000008798	SALL1	94	36.500	ENSAPLG00000003356	SALL1	99	36.865	Anas_platyrhynchos
ENSEBUG00000008798	SALL1	92	37.628	ENSACAG00000014399	SALL1	62	43.693	Anolis_carolinensis
ENSEBUG00000008798	SALL1	73	43.224	ENSANAG00000027238	SALL1	99	37.089	Aotus_nancymaae
ENSEBUG00000008798	SALL1	67	41.223	ENSACLG00000017148	sall1a	67	40.632	Astatotilapia_calliptera
ENSEBUG00000008798	SALL1	79	38.184	ENSAMXG00000017702	sall1b	63	39.663	Astyanax_mexicanus
ENSEBUG00000008798	SALL1	94	37.394	ENSAMXG00000018599	sall1a	65	42.411	Astyanax_mexicanus
ENSEBUG00000008798	SALL1	68	42.748	ENSBTAG00000008544	SALL1	69	41.939	Bos_taurus
ENSEBUG00000008798	SALL1	73	41.818	ENSCJAG00000001740	SALL1	69	42.932	Callithrix_jacchus
ENSEBUG00000008798	SALL1	61	65.306	ENSCAFG00000009755	SALL1	62	65.385	Canis_familiaris
ENSEBUG00000008798	SALL1	68	43.556	ENSCAFG00020002842	SALL1	69	41.535	Canis_lupus_dingo
ENSEBUG00000008798	SALL1	68	42.702	ENSCHIG00000026074	SALL1	71	41.684	Capra_hircus
ENSEBUG00000008798	SALL1	99	37.473	ENSTSYG00000029464	SALL1	99	36.557	Carlito_syrichta
ENSEBUG00000008798	SALL1	79	41.466	ENSCPOG00000006564	SALL1	71	42.239	Cavia_porcellus
ENSEBUG00000008798	SALL1	68	43.709	ENSCCAG00000001639	SALL1	96	36.637	Cebus_capucinus
ENSEBUG00000008798	SALL1	73	43.093	ENSCATG00000004982	SALL1	99	37.023	Cercocebus_atys
ENSEBUG00000008798	SALL1	94	37.720	ENSCLAG00000006380	SALL1	99	36.819	Chinchilla_lanigera
ENSEBUG00000008798	SALL1	73	42.284	ENSCSAG00000005319	SALL1	69	42.421	Chlorocebus_sabaeus
ENSEBUG00000008798	SALL1	89	65.385	ENSCPBG00000015924	SALL1	95	65.385	Chrysemys_picta_bellii
ENSEBUG00000008798	SALL1	73	43.093	ENSCANG00000036664	SALL1	99	36.977	Colobus_angolensis_palliatus
ENSEBUG00000008798	SALL1	94	37.308	ENSCGRG00001023314	-	99	36.799	Cricetulus_griseus_chok1gshd
ENSEBUG00000008798	SALL1	68	43.771	ENSCGRG00000009496	Sall1	71	42.402	Cricetulus_griseus_crigri
ENSEBUG00000008798	SALL1	67	41.629	ENSCSEG00000009349	sall1a	62	43.147	Cynoglossus_semilaevis
ENSEBUG00000008798	SALL1	89	61.538	ENSCVAG00000020513	sall1a	62	61.538	Cyprinodon_variegatus
ENSEBUG00000008798	SALL1	64	40.431	ENSDARG00000075891	sall1b	63	38.259	Danio_rerio
ENSEBUG00000008798	SALL1	94	36.552	ENSDARG00000074319	sall1a	71	41.620	Danio_rerio
ENSEBUG00000008798	SALL1	94	37.396	ENSDNOG00000016413	SALL1	99	36.942	Dasypus_novemcinctus
ENSEBUG00000008798	SALL1	79	41.187	ENSETEG00000015150	SALL1	67	43.000	Echinops_telfairi
ENSEBUG00000008798	SALL1	94	36.685	ENSEASG00005014602	SALL1	69	41.658	Equus_asinus_asinus
ENSEBUG00000008798	SALL1	90	35.507	ENSECAG00000011334	SALL1	67	41.912	Equus_caballus
ENSEBUG00000008798	SALL1	68	44.130	ENSEEUG00000002014	SALL1	67	43.578	Erinaceus_europaeus
ENSEBUG00000008798	SALL1	65	63.462	ENSELUG00000006159	sall1a	68	63.462	Esox_lucius
ENSEBUG00000008798	SALL1	53	65.385	ENSELUG00000017774	-	51	65.385	Esox_lucius
ENSEBUG00000008798	SALL1	69	41.463	ENSFCAG00000024654	SALL1	75	42.239	Felis_catus
ENSEBUG00000008798	SALL1	99	37.654	ENSFALG00000000074	SALL1	99	37.299	Ficedula_albicollis
ENSEBUG00000008798	SALL1	94	35.615	ENSFHEG00000012579	sall1a	62	42.755	Fundulus_heteroclitus
ENSEBUG00000008798	SALL1	64	63.265	ENSFHEG00000008424	-	67	65.957	Fundulus_heteroclitus
ENSEBUG00000008798	SALL1	94	38.175	ENSGALG00000039238	SALL1	99	37.252	Gallus_gallus
ENSEBUG00000008798	SALL1	94	35.714	ENSGAFG00000009964	sall1a	62	41.259	Gambusia_affinis
ENSEBUG00000008798	SALL1	67	41.871	ENSGACG00000016702	sall1a	62	43.142	Gasterosteus_aculeatus
ENSEBUG00000008798	SALL1	99	36.158	ENSGAGG00000013979	SALL1	99	35.845	Gopherus_agassizii
ENSEBUG00000008798	SALL1	73	43.514	ENSGGOG00000000663	SALL1	69	42.827	Gorilla_gorilla
ENSEBUG00000008798	SALL1	67	41.223	ENSHBUG00000022005	sall1a	67	40.632	Haplochromis_burtoni
ENSEBUG00000008798	SALL1	94	37.405	ENSHGLG00000004288	-	99	37.318	Heterocephalus_glaber_female
ENSEBUG00000008798	SALL1	94	37.405	ENSHGLG00100017496	SALL1	99	37.318	Heterocephalus_glaber_male
ENSEBUG00000008798	SALL1	95	35.650	ENSHCOG00000000974	sall1a	63	41.263	Hippocampus_comes
ENSEBUG00000008798	SALL1	94	35.909	ENSIPUG00000016265	SALL1	65	41.860	Ictalurus_punctatus
ENSEBUG00000008798	SALL1	94	36.886	ENSSTOG00000020885	SALL1	99	36.203	Ictidomys_tridecemlineatus
ENSEBUG00000008798	SALL1	67	41.379	ENSKMAG00000016681	sall1a	62	42.523	Kryptolebias_marmoratus
ENSEBUG00000008798	SALL1	78	38.469	ENSLBEG00000012207	sall1a	60	41.657	Labrus_bergylta
ENSEBUG00000008798	SALL1	76	34.510	ENSLACG00000014018	-	60	37.957	Latimeria_chalumnae
ENSEBUG00000008798	SALL1	68	42.605	ENSLACG00000003556	SALL1	96	37.110	Latimeria_chalumnae
ENSEBUG00000008798	SALL1	95	36.682	ENSLOCG00000007283	sall1b	62	43.438	Lepisosteus_oculatus
ENSEBUG00000008798	SALL1	68	43.819	ENSLAFG00000015251	SALL1	67	43.367	Loxodonta_africana
ENSEBUG00000008798	SALL1	73	43.093	ENSMFAG00000003298	SALL1	69	42.932	Macaca_fascicularis
ENSEBUG00000008798	SALL1	73	43.093	ENSMMUG00000017200	SALL1	74	42.932	Macaca_mulatta
ENSEBUG00000008798	SALL1	73	43.093	ENSMNEG00000034770	SALL1	74	42.932	Macaca_nemestrina
ENSEBUG00000008798	SALL1	73	43.093	ENSMLEG00000036406	SALL1	99	36.977	Mandrillus_leucophaeus
ENSEBUG00000008798	SALL1	94	36.191	ENSMAMG00000004164	sall1a	67	42.571	Mastacembelus_armatus
ENSEBUG00000008798	SALL1	67	41.223	ENSMZEG00005006479	sall1a	67	40.632	Maylandia_zebra
ENSEBUG00000008798	SALL1	78	41.813	ENSMGAG00000004704	SALL1	71	42.678	Meleagris_gallopavo
ENSEBUG00000008798	SALL1	99	36.858	ENSMAUG00000019093	Sall1	99	36.458	Mesocricetus_auratus
ENSEBUG00000008798	SALL1	99	37.162	ENSMICG00000036486	SALL1	69	42.661	Microcebus_murinus
ENSEBUG00000008798	SALL1	67	41.574	ENSMMOG00000016400	sall1a	62	42.509	Mola_mola
ENSEBUG00000008798	SALL1	99	36.880	ENSMODG00000013114	SALL1	70	41.962	Monodelphis_domestica
ENSEBUG00000008798	SALL1	94	35.942	ENSMALG00000013400	sall1a	62	54.839	Monopterus_albus
ENSEBUG00000008798	SALL1	68	43.860	MGP_CAROLIEiJ_G0031362	Sall1	99	35.826	Mus_caroli
ENSEBUG00000008798	SALL1	68	43.860	ENSMUSG00000031665	Sall1	69	42.466	Mus_musculus
ENSEBUG00000008798	SALL1	68	44.176	MGP_PahariEiJ_G0022961	Sall1	99	37.034	Mus_pahari
ENSEBUG00000008798	SALL1	68	43.860	MGP_SPRETEiJ_G0032480	Sall1	69	42.571	Mus_spretus
ENSEBUG00000008798	SALL1	79	39.982	ENSMPUG00000003265	SALL1	66	42.826	Mustela_putorius_furo
ENSEBUG00000008798	SALL1	68	42.700	ENSMLUG00000015541	SALL1	67	43.449	Myotis_lucifugus
ENSEBUG00000008798	SALL1	67	40.699	ENSNBRG00000009307	sall1a	67	41.993	Neolamprologus_brichardi
ENSEBUG00000008798	SALL1	70	70.000	ENSNLEG00000001008	SALL1	68	70.000	Nomascus_leucogenys
ENSEBUG00000008798	SALL1	99	37.147	ENSMEUG00000012206	SALL1	70	42.100	Notamacropus_eugenii
ENSEBUG00000008798	SALL1	53	63.462	ENSOPRG00000005645	SALL1	51	63.462	Ochotona_princeps
ENSEBUG00000008798	SALL1	94	37.992	ENSODEG00000003685	SALL1	99	36.780	Octodon_degus
ENSEBUG00000008798	SALL1	61	61.538	ENSONIG00000002831	sall1a	62	61.538	Oreochromis_niloticus
ENSEBUG00000008798	SALL1	62	65.306	ENSOANG00000013399	SALL1	75	65.385	Ornithorhynchus_anatinus
ENSEBUG00000008798	SALL1	94	36.537	ENSORLG00000013827	sall1a	69	42.608	Oryzias_latipes
ENSEBUG00000008798	SALL1	94	36.537	ENSORLG00020020570	sall1a	63	42.558	Oryzias_latipes_hni
ENSEBUG00000008798	SALL1	96	36.466	ENSORLG00015018830	sall1a	69	42.558	Oryzias_latipes_hsok
ENSEBUG00000008798	SALL1	67	41.131	ENSOMEG00000016043	sall1a	68	42.608	Oryzias_melastigma
ENSEBUG00000008798	SALL1	99	36.857	ENSOGAG00000027316	SALL1	69	42.105	Otolemur_garnettii
ENSEBUG00000008798	SALL1	69	38.689	ENSOARG00000017583	SALL1	69	37.553	Ovis_aries
ENSEBUG00000008798	SALL1	81	30.326	ENSPPAG00000035136	-	69	31.590	Pan_paniscus
ENSEBUG00000008798	SALL1	73	43.326	ENSPPAG00000035657	SALL1	70	42.932	Pan_paniscus
ENSEBUG00000008798	SALL1	68	43.488	ENSPPRG00000023283	SALL1	75	41.922	Panthera_pardus
ENSEBUG00000008798	SALL1	58	65.957	ENSPTIG00000013539	-	61	65.957	Panthera_tigris_altaica
ENSEBUG00000008798	SALL1	80	30.587	ENSPTRG00000045256	-	66	32.151	Pan_troglodytes
ENSEBUG00000008798	SALL1	69	44.444	ENSPTRG00000008108	SALL1	96	37.557	Pan_troglodytes
ENSEBUG00000008798	SALL1	73	43.093	ENSPANG00000024176	SALL1	99	36.977	Papio_anubis
ENSEBUG00000008798	SALL1	99	37.034	ENSPKIG00000005383	-	69	42.055	Paramormyrops_kingsleyae
ENSEBUG00000008798	SALL1	72	41.018	ENSPKIG00000022251	sall1a	67	48.750	Paramormyrops_kingsleyae
ENSEBUG00000008798	SALL1	99	36.858	ENSPSIG00000008582	SALL1	99	36.745	Pelodiscus_sinensis
ENSEBUG00000008798	SALL1	53	61.538	ENSPMAG00000008148	sall1b	96	39.097	Petromyzon_marinus
ENSEBUG00000008798	SALL1	99	37.491	ENSPCIG00000017840	SALL1	70	42.797	Phascolarctos_cinereus
ENSEBUG00000008798	SALL1	79	39.570	ENSPFOG00000015799	sall1a	61	42.267	Poecilia_formosa
ENSEBUG00000008798	SALL1	94	36.147	ENSPLAG00000022539	sall1a	62	42.267	Poecilia_latipinna
ENSEBUG00000008798	SALL1	94	35.890	ENSPMEG00000020894	sall1a	62	42.267	Poecilia_mexicana
ENSEBUG00000008798	SALL1	94	35.600	ENSPREG00000006802	sall1a	63	42.267	Poecilia_reticulata
ENSEBUG00000008798	SALL1	62	65.385	ENSPPYG00000007345	SALL1	94	65.385	Pongo_abelii
ENSEBUG00000008798	SALL1	63	65.306	ENSPCAG00000008162	SALL1	65	65.306	Procavia_capensis
ENSEBUG00000008798	SALL1	73	41.573	ENSPCOG00000028192	SALL1	69	42.344	Propithecus_coquereli
ENSEBUG00000008798	SALL1	64	63.462	ENSPVAG00000015374	SALL1	94	63.462	Pteropus_vampyrus
ENSEBUG00000008798	SALL1	67	41.223	ENSPNYG00000010865	sall1a	67	40.632	Pundamilia_nyererei
ENSEBUG00000008798	SALL1	94	36.801	ENSPNAG00000023644	sall1a	62	44.104	Pygocentrus_nattereri
ENSEBUG00000008798	SALL1	62	68.085	ENSPNAG00000028248	-	63	38.806	Pygocentrus_nattereri
ENSEBUG00000008798	SALL1	72	36.880	ENSPNAG00000007442	sall1b	52	63.462	Pygocentrus_nattereri
ENSEBUG00000008798	SALL1	99	36.896	ENSRNOG00000013907	Sall1	69	42.431	Rattus_norvegicus
ENSEBUG00000008798	SALL1	73	43.093	ENSRBIG00000015707	SALL1	75	42.932	Rhinopithecus_bieti
ENSEBUG00000008798	SALL1	73	43.093	ENSRROG00000035777	SALL1	75	42.932	Rhinopithecus_roxellana
ENSEBUG00000008798	SALL1	73	42.490	ENSSBOG00000032186	SALL1	99	35.832	Saimiri_boliviensis_boliviensis
ENSEBUG00000008798	SALL1	99	37.344	ENSSHAG00000009477	SALL1	99	35.945	Sarcophilus_harrisii
ENSEBUG00000008798	SALL1	81	38.598	ENSSFOG00015001590	sall1a	67	42.825	Scleropages_formosus
ENSEBUG00000008798	SALL1	70	42.333	ENSSFOG00015020020	sall1a	64	43.888	Scleropages_formosus
ENSEBUG00000008798	SALL1	94	35.123	ENSSMAG00000009160	sall1a	62	42.538	Scophthalmus_maximus
ENSEBUG00000008798	SALL1	94	36.468	ENSSDUG00000006507	sall1a	67	42.943	Seriola_dumerili
ENSEBUG00000008798	SALL1	59	58.333	ENSSLDG00000014465	-	83	58.974	Seriola_lalandi_dorsalis
ENSEBUG00000008798	SALL1	94	36.468	ENSSLDG00000017721	sall1a	62	42.840	Seriola_lalandi_dorsalis
ENSEBUG00000008798	SALL1	68	43.736	ENSSARG00000000661	SALL1	71	42.089	Sorex_araneus
ENSEBUG00000008798	SALL1	69	43.214	ENSSPUG00000000156	SALL1	96	37.288	Sphenodon_punctatus
ENSEBUG00000008798	SALL1	94	36.481	ENSSPAG00000021615	sall1a	62	42.942	Stegastes_partitus
ENSEBUG00000008798	SALL1	64	61.538	ENSSSCG00000002836	SALL1	63	61.538	Sus_scrofa
ENSEBUG00000008798	SALL1	99	37.400	ENSTGUG00000007514	SALL1	99	37.352	Taeniopygia_guttata
ENSEBUG00000008798	SALL1	63	41.538	ENSTNIG00000004257	sall1a	67	41.498	Tetraodon_nigroviridis
ENSEBUG00000008798	SALL1	52	56.863	ENSTBEG00000002119	-	53	56.863	Tupaia_belangeri
ENSEBUG00000008798	SALL1	62	65.385	ENSUAMG00000023379	-	60	65.385	Ursus_americanus
ENSEBUG00000008798	SALL1	62	65.385	ENSVVUG00000019383	-	64	65.385	Vulpes_vulpes
ENSEBUG00000008798	SALL1	92	31.014	ENSXETG00000017176	sall2	63	60.714	Xenopus_tropicalis
ENSEBUG00000008798	SALL1	83	39.877	ENSXETG00000018417	sall1	62	43.764	Xenopus_tropicalis
ENSEBUG00000008798	SALL1	94	35.540	ENSXMAG00000016273	sall1a	67	42.290	Xiphophorus_maculatus