EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000008835 (Gene tree)
Gene ID: -
Gene Symbol: prpf6
Alias: c20orf14|fc12b02|wu:fa05f07|wu:fc12b02|zgc:65913
Full Name: PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 91480 bases
Position: chrFYBX02005816.1:1941053-2032532
Accession: ZDB-GENE-030131-2575
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000014051	PRP1_N	PF06424.12	1e-57	1	1
ENSEBUP00000014021	PRP1_N	PF06424.12	1.1e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000014597	-	5635	-	ENSEBUP00000014021	978 (aa)	-	-
ENSEBUT00000014628	-	5680	-	ENSEBUP00000014051	945 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000008835's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000008835's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000008835	prpf6	99	86.744	ENSG00000101161	PRPF6	99	86.744	Homo_sapiens
ENSEBUG00000008835	prpf6	100	85.608	ENSAPOG00000010395	prpf6	96	86.032	Acanthochromis_polyacanthus
ENSEBUG00000008835	prpf6	100	85.503	ENSAMEG00000001916	PRPF6	99	85.503	Ailuropoda_melanoleuca
ENSEBUG00000008835	prpf6	100	86.243	ENSACIG00000019862	prpf6	96	86.667	Amphilophus_citrinellus
ENSEBUG00000008835	prpf6	100	85.714	ENSAOCG00000012988	prpf6	96	86.138	Amphiprion_ocellaris
ENSEBUG00000008835	prpf6	99	79.618	ENSAPEG00000008301	prpf6	99	80.042	Amphiprion_percula
ENSEBUG00000008835	prpf6	100	85.608	ENSATEG00000005581	prpf6	96	86.032	Anabas_testudineus
ENSEBUG00000008835	prpf6	99	87.593	ENSACAG00000006464	PRPF6	96	87.144	Anolis_carolinensis
ENSEBUG00000008835	prpf6	99	87.169	ENSANAG00000012661	PRPF6	99	87.897	Aotus_nancymaae
ENSEBUG00000008835	prpf6	100	85.714	ENSACLG00000025875	prpf6	96	86.138	Astatotilapia_calliptera
ENSEBUG00000008835	prpf6	100	85.714	ENSAMXG00000001929	prpf6	96	86.138	Astyanax_mexicanus
ENSEBUG00000008835	prpf6	99	87.063	ENSBTAG00000011656	PRPF6	99	87.063	Bos_taurus
ENSEBUG00000008835	prpf6	99	87.169	ENSCJAG00000010616	PRPF6	99	87.169	Callithrix_jacchus
ENSEBUG00000008835	prpf6	99	86.957	ENSCAFG00000013165	PRPF6	99	86.957	Canis_familiaris
ENSEBUG00000008835	prpf6	99	86.957	ENSCAFG00020002050	PRPF6	99	86.957	Canis_lupus_dingo
ENSEBUG00000008835	prpf6	99	87.063	ENSCHIG00000018187	PRPF6	99	87.063	Capra_hircus
ENSEBUG00000008835	prpf6	99	87.169	ENSTSYG00000007814	PRPF6	99	87.169	Carlito_syrichta
ENSEBUG00000008835	prpf6	97	86.087	ENSCAPG00000015077	PRPF6	100	85.761	Cavia_aperea
ENSEBUG00000008835	prpf6	99	87.169	ENSCPOG00000007518	PRPF6	99	87.169	Cavia_porcellus
ENSEBUG00000008835	prpf6	99	84.305	ENSCCAG00000024564	PRPF6	99	84.305	Cebus_capucinus
ENSEBUG00000008835	prpf6	99	86.744	ENSCATG00000037473	PRPF6	99	86.744	Cercocebus_atys
ENSEBUG00000008835	prpf6	99	83.987	ENSCLAG00000003854	PRPF6	99	83.987	Chinchilla_lanigera
ENSEBUG00000008835	prpf6	99	82.755	ENSCSAG00000016742	PRPF6	99	82.755	Chlorocebus_sabaeus
ENSEBUG00000008835	prpf6	85	71.845	ENSCHOG00000003315	-	99	71.593	Choloepus_hoffmanni
ENSEBUG00000008835	prpf6	99	87.275	ENSCPBG00000013964	PRPF6	97	86.597	Chrysemys_picta_bellii
ENSEBUG00000008835	prpf6	99	72.497	ENSCING00000008817	-	99	72.497	Ciona_intestinalis
ENSEBUG00000008835	prpf6	99	86.744	ENSCANG00000038230	PRPF6	99	86.744	Colobus_angolensis_palliatus
ENSEBUG00000008835	prpf6	99	87.169	ENSCGRG00001022666	Prpf6	99	87.169	Cricetulus_griseus_chok1gshd
ENSEBUG00000008835	prpf6	99	82.484	ENSCSEG00000018561	prpf6	99	82.909	Cynoglossus_semilaevis
ENSEBUG00000008835	prpf6	100	85.714	ENSCVAG00000010550	prpf6	96	86.138	Cyprinodon_variegatus
ENSEBUG00000008835	prpf6	99	85.048	ENSDARG00000091367	prpf6	99	85.472	Danio_rerio
ENSEBUG00000008835	prpf6	99	87.805	ENSDNOG00000040544	PRPF6	99	87.805	Dasypus_novemcinctus
ENSEBUG00000008835	prpf6	91	86.380	ENSDORG00000005406	Prpf6	100	86.380	Dipodomys_ordii
ENSEBUG00000008835	prpf6	99	69.851	FBgn0036828	CG6841	99	70.276	Drosophila_melanogaster
ENSEBUG00000008835	prpf6	85	86.696	ENSETEG00000004447	PRPF6	85	86.696	Echinops_telfairi
ENSEBUG00000008835	prpf6	99	86.957	ENSEASG00005023115	PRPF6	99	86.957	Equus_asinus_asinus
ENSEBUG00000008835	prpf6	99	82.927	ENSECAG00000013983	PRPF6	99	82.927	Equus_caballus
ENSEBUG00000008835	prpf6	90	91.304	ENSEEUG00000000180	PRPF6	78	83.372	Erinaceus_europaeus
ENSEBUG00000008835	prpf6	100	85.079	ENSELUG00000001945	prpf6	93	85.079	Esox_lucius
ENSEBUG00000008835	prpf6	99	87.169	ENSFCAG00000001183	PRPF6	99	87.169	Felis_catus
ENSEBUG00000008835	prpf6	100	87.725	ENSFALG00000010326	-	98	87.368	Ficedula_albicollis
ENSEBUG00000008835	prpf6	99	82.078	ENSFALG00000006046	-	97	82.078	Ficedula_albicollis
ENSEBUG00000008835	prpf6	99	85.684	ENSFDAG00000006451	PRPF6	100	86.554	Fukomys_damarensis
ENSEBUG00000008835	prpf6	100	86.984	ENSFHEG00000000560	prpf6	96	86.984	Fundulus_heteroclitus
ENSEBUG00000008835	prpf6	100	84.127	ENSGMOG00000015622	prpf6	99	84.127	Gadus_morhua
ENSEBUG00000008835	prpf6	99	87.911	ENSGALG00000006001	PRPF6	99	87.911	Gallus_gallus
ENSEBUG00000008835	prpf6	100	82.116	ENSGAFG00000021109	prpf6	96	82.540	Gambusia_affinis
ENSEBUG00000008835	prpf6	100	84.868	ENSGACG00000002576	prpf6	99	84.868	Gasterosteus_aculeatus
ENSEBUG00000008835	prpf6	99	87.381	ENSGAGG00000008653	PRPF6	97	86.702	Gopherus_agassizii
ENSEBUG00000008835	prpf6	99	86.744	ENSGGOG00000016876	PRPF6	99	86.744	Gorilla_gorilla
ENSEBUG00000008835	prpf6	100	85.714	ENSHBUG00000004496	prpf6	96	86.138	Haplochromis_burtoni
ENSEBUG00000008835	prpf6	99	87.169	ENSHGLG00000009222	PRPF6	99	87.169	Heterocephalus_glaber_female
ENSEBUG00000008835	prpf6	97	87.065	ENSHGLG00100016600	PRPF6	100	87.065	Heterocephalus_glaber_male
ENSEBUG00000008835	prpf6	100	84.762	ENSHCOG00000011513	prpf6	96	85.185	Hippocampus_comes
ENSEBUG00000008835	prpf6	100	86.032	ENSIPUG00000004912	prpf6	96	86.243	Ictalurus_punctatus
ENSEBUG00000008835	prpf6	99	84.322	ENSSTOG00000002922	PRPF6	99	84.110	Ictidomys_tridecemlineatus
ENSEBUG00000008835	prpf6	99	87.169	ENSJJAG00000000836	Prpf6	99	87.169	Jaculus_jaculus
ENSEBUG00000008835	prpf6	100	85.714	ENSKMAG00000017800	prpf6	96	86.138	Kryptolebias_marmoratus
ENSEBUG00000008835	prpf6	100	85.608	ENSLBEG00000012582	prpf6	96	85.608	Labrus_bergylta
ENSEBUG00000008835	prpf6	99	87.169	ENSLOCG00000004827	prpf6	96	86.532	Lepisosteus_oculatus
ENSEBUG00000008835	prpf6	99	86.850	ENSLAFG00000005272	PRPF6	99	86.850	Loxodonta_africana
ENSEBUG00000008835	prpf6	99	86.744	ENSMFAG00000037542	PRPF6	99	86.744	Macaca_fascicularis
ENSEBUG00000008835	prpf6	99	80.826	ENSMMUG00000015558	PRPF6	98	88.448	Macaca_mulatta
ENSEBUG00000008835	prpf6	99	74.762	ENSMNEG00000045555	PRPF6	99	74.762	Macaca_nemestrina
ENSEBUG00000008835	prpf6	100	85.608	ENSMAMG00000010718	prpf6	96	86.032	Mastacembelus_armatus
ENSEBUG00000008835	prpf6	100	85.201	ENSMZEG00005015261	-	99	85.624	Maylandia_zebra
ENSEBUG00000008835	prpf6	94	85.198	ENSMZEG00005026539	prpf6	100	85.650	Maylandia_zebra
ENSEBUG00000008835	prpf6	97	87.826	ENSMGAG00000006634	PRPF6	100	87.826	Meleagris_gallopavo
ENSEBUG00000008835	prpf6	99	87.169	ENSMAUG00000013969	Prpf6	99	87.169	Mesocricetus_auratus
ENSEBUG00000008835	prpf6	87	86.545	ENSMICG00000017793	PRPF6	98	86.503	Microcebus_murinus
ENSEBUG00000008835	prpf6	99	87.169	ENSMOCG00000001701	Prpf6	99	87.169	Microtus_ochrogaster
ENSEBUG00000008835	prpf6	99	84.926	ENSMMOG00000020419	prpf6	99	85.350	Mola_mola
ENSEBUG00000008835	prpf6	97	87.348	ENSMODG00000017051	PRPF6	99	87.348	Monodelphis_domestica
ENSEBUG00000008835	prpf6	99	85.974	ENSMALG00000000089	prpf6	100	85.974	Monopterus_albus
ENSEBUG00000008835	prpf6	99	80.912	MGP_CAROLIEiJ_G0024814	Prpf6	100	85.185	Mus_caroli
ENSEBUG00000008835	prpf6	99	87.169	ENSMUSG00000002455	Prpf6	99	87.169	Mus_musculus
ENSEBUG00000008835	prpf6	99	87.169	MGP_PahariEiJ_G0026262	Prpf6	99	87.169	Mus_pahari
ENSEBUG00000008835	prpf6	99	87.169	MGP_SPRETEiJ_G0025741	Prpf6	99	87.169	Mus_spretus
ENSEBUG00000008835	prpf6	91	86.905	ENSMPUG00000008673	PRPF6	99	86.905	Mustela_putorius_furo
ENSEBUG00000008835	prpf6	99	87.169	ENSNGAG00000003365	Prpf6	99	87.169	Nannospalax_galili
ENSEBUG00000008835	prpf6	100	85.820	ENSNBRG00000015025	prpf6	96	86.243	Neolamprologus_brichardi
ENSEBUG00000008835	prpf6	99	86.744	ENSNLEG00000010208	PRPF6	99	86.744	Nomascus_leucogenys
ENSEBUG00000008835	prpf6	99	78.916	ENSMEUG00000009824	-	90	79.249	Notamacropus_eugenii
ENSEBUG00000008835	prpf6	99	81.760	ENSODEG00000004841	PRPF6	99	81.760	Octodon_degus
ENSEBUG00000008835	prpf6	100	85.926	ENSONIG00000017406	prpf6	96	86.349	Oreochromis_niloticus
ENSEBUG00000008835	prpf6	99	87.381	ENSOANG00000004920	PRPF6	99	87.381	Ornithorhynchus_anatinus
ENSEBUG00000008835	prpf6	99	85.882	ENSOCUG00000014151	PRPF6	100	85.882	Oryctolagus_cuniculus
ENSEBUG00000008835	prpf6	100	86.667	ENSORLG00000009592	prpf6	96	86.667	Oryzias_latipes
ENSEBUG00000008835	prpf6	100	86.561	ENSORLG00020001458	prpf6	96	86.561	Oryzias_latipes_hni
ENSEBUG00000008835	prpf6	100	86.561	ENSORLG00015018762	prpf6	96	86.561	Oryzias_latipes_hsok
ENSEBUG00000008835	prpf6	100	86.243	ENSOMEG00000012174	prpf6	96	86.667	Oryzias_melastigma
ENSEBUG00000008835	prpf6	99	80.297	ENSOGAG00000007573	PRPF6	99	80.297	Otolemur_garnettii
ENSEBUG00000008835	prpf6	99	86.638	ENSOARG00000008776	PRPF6	99	86.638	Ovis_aries
ENSEBUG00000008835	prpf6	99	86.744	ENSPPAG00000008686	PRPF6	99	86.744	Pan_paniscus
ENSEBUG00000008835	prpf6	99	87.169	ENSPPRG00000008497	PRPF6	99	87.169	Panthera_pardus
ENSEBUG00000008835	prpf6	97	87.065	ENSPTIG00000011184	PRPF6	97	87.065	Panthera_tigris_altaica
ENSEBUG00000008835	prpf6	99	86.744	ENSPTRG00000013765	PRPF6	99	86.744	Pan_troglodytes
ENSEBUG00000008835	prpf6	99	86.638	ENSPANG00000024135	PRPF6	99	86.638	Papio_anubis
ENSEBUG00000008835	prpf6	99	87.063	ENSPKIG00000005627	prpf6	99	87.275	Paramormyrops_kingsleyae
ENSEBUG00000008835	prpf6	94	87.006	ENSPSIG00000007717	PRPF6	100	87.006	Pelodiscus_sinensis
ENSEBUG00000008835	prpf6	100	83.615	ENSPMGG00000008925	prpf6	96	83.932	Periophthalmus_magnuspinnatus
ENSEBUG00000008835	prpf6	99	87.169	ENSPEMG00000016036	Prpf6	99	87.169	Peromyscus_maniculatus_bairdii
ENSEBUG00000008835	prpf6	99	88.759	ENSPMAG00000006144	prpf6	99	88.759	Petromyzon_marinus
ENSEBUG00000008835	prpf6	99	87.699	ENSPCIG00000017909	PRPF6	99	87.699	Phascolarctos_cinereus
ENSEBUG00000008835	prpf6	100	85.835	ENSPFOG00000006431	prpf6	96	86.258	Poecilia_formosa
ENSEBUG00000008835	prpf6	100	85.926	ENSPLAG00000005974	prpf6	96	86.349	Poecilia_latipinna
ENSEBUG00000008835	prpf6	100	86.032	ENSPMEG00000009977	prpf6	96	86.455	Poecilia_mexicana
ENSEBUG00000008835	prpf6	100	85.926	ENSPREG00000017993	prpf6	92	86.349	Poecilia_reticulata
ENSEBUG00000008835	prpf6	99	86.214	ENSPPYG00000011256	PRPF6	99	86.214	Pongo_abelii
ENSEBUG00000008835	prpf6	95	89.593	ENSPCAG00000006536	PRPF6	88	89.593	Procavia_capensis
ENSEBUG00000008835	prpf6	99	87.063	ENSPCOG00000016881	PRPF6	99	87.063	Propithecus_coquereli
ENSEBUG00000008835	prpf6	99	81.760	ENSPVAG00000014316	PRPF6	99	81.760	Pteropus_vampyrus
ENSEBUG00000008835	prpf6	100	70.296	ENSPNYG00000001939	prpf6	96	75.450	Pundamilia_nyererei
ENSEBUG00000008835	prpf6	99	85.896	ENSPNAG00000015606	prpf6	96	86.320	Pygocentrus_nattereri
ENSEBUG00000008835	prpf6	99	87.169	ENSRNOG00000051498	Prpf6	99	87.169	Rattus_norvegicus
ENSEBUG00000008835	prpf6	99	86.744	ENSRBIG00000043613	PRPF6	99	86.744	Rhinopithecus_bieti
ENSEBUG00000008835	prpf6	99	83.844	ENSRROG00000040969	PRPF6	98	87.263	Rhinopithecus_roxellana
ENSEBUG00000008835	prpf6	91	84.211	ENSSBOG00000020632	PRPF6	91	84.035	Saimiri_boliviensis_boliviensis
ENSEBUG00000008835	prpf6	99	87.699	ENSSHAG00000016810	PRPF6	99	87.699	Sarcophilus_harrisii
ENSEBUG00000008835	prpf6	99	87.152	ENSSFOG00015020859	prpf6	100	87.366	Scleropages_formosus
ENSEBUG00000008835	prpf6	100	85.503	ENSSMAG00000008112	prpf6	96	85.503	Scophthalmus_maximus
ENSEBUG00000008835	prpf6	100	85.608	ENSSDUG00000016142	prpf6	96	86.032	Seriola_dumerili
ENSEBUG00000008835	prpf6	100	85.608	ENSSLDG00000025283	prpf6	96	86.032	Seriola_lalandi_dorsalis
ENSEBUG00000008835	prpf6	94	86.102	ENSSPUG00000018260	PRPF6	100	86.102	Sphenodon_punctatus
ENSEBUG00000008835	prpf6	100	85.397	ENSSPAG00000015850	prpf6	96	85.820	Stegastes_partitus
ENSEBUG00000008835	prpf6	99	86.744	ENSSSCG00000029119	PRPF6	100	86.102	Sus_scrofa
ENSEBUG00000008835	prpf6	100	87.831	ENSTGUG00000007221	PRPF6	99	87.831	Taeniopygia_guttata
ENSEBUG00000008835	prpf6	100	85.079	ENSTRUG00000002920	prpf6	96	85.503	Takifugu_rubripes
ENSEBUG00000008835	prpf6	99	79.641	ENSTNIG00000017873	prpf6	99	80.063	Tetraodon_nigroviridis
ENSEBUG00000008835	prpf6	88	86.188	ENSTBEG00000005348	PRPF6	85	86.188	Tupaia_belangeri
ENSEBUG00000008835	prpf6	99	86.957	ENSTTRG00000013068	PRPF6	99	86.957	Tursiops_truncatus
ENSEBUG00000008835	prpf6	98	85.374	ENSUMAG00000021631	PRPF6	98	85.374	Ursus_maritimus
ENSEBUG00000008835	prpf6	99	86.957	ENSVVUG00000014948	PRPF6	99	86.957	Vulpes_vulpes
ENSEBUG00000008835	prpf6	99	86.744	ENSXETG00000012054	prpf6	97	86.957	Xenopus_tropicalis
ENSEBUG00000008835	prpf6	100	86.032	ENSXCOG00000008082	prpf6	96	86.455	Xiphophorus_couchianus
ENSEBUG00000008835	prpf6	100	86.032	ENSXMAG00000015581	prpf6	96	86.455	Xiphophorus_maculatus