EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000008898 (Gene tree)
Gene ID: -
Gene Symbol: rnaseh1 (1 of many)
Alias: zgc:91971
Full Name: ribonuclease H1
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 40570 bases
Position: chrFYBX02009439.1:72170-112739
Accession: ZDB-GENE-040718-407
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000014110	RNase_H	PF00075.24	1.7e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000014686	-	2647	-	ENSEBUP00000014110	294 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000008898's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000008898's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000008898	rnaseh1	97	40.138	ENSEBUG00000006116	rnaseh1	77	40.138

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000008898	rnaseh1	98	47.059	ENSG00000171865	RNASEH1	90	47.059	Homo_sapiens
ENSEBUG00000008898	rnaseh1	98	46.713	ENSAPOG00000000412	rnaseh1	88	46.713	Acanthochromis_polyacanthus
ENSEBUG00000008898	rnaseh1	97	47.038	ENSAMEG00000018433	RNASEH1	88	47.038	Ailuropoda_melanoleuca
ENSEBUG00000008898	rnaseh1	99	45.361	ENSACIG00000014666	rnaseh1	87	45.361	Amphilophus_citrinellus
ENSEBUG00000008898	rnaseh1	99	45.704	ENSAOCG00000015210	rnaseh1	89	45.704	Amphiprion_ocellaris
ENSEBUG00000008898	rnaseh1	99	45.704	ENSAPEG00000014104	rnaseh1	89	45.704	Amphiprion_percula
ENSEBUG00000008898	rnaseh1	99	46.392	ENSATEG00000000598	rnaseh1	94	46.392	Anabas_testudineus
ENSEBUG00000008898	rnaseh1	94	44.523	ENSAPLG00000001961	RNASEH1	100	44.523	Anas_platyrhynchos
ENSEBUG00000008898	rnaseh1	98	42.903	ENSACAG00000016857	rnaseh1	91	42.903	Anolis_carolinensis
ENSEBUG00000008898	rnaseh1	97	46.021	ENSANAG00000024055	RNASEH1	89	46.021	Aotus_nancymaae
ENSEBUG00000008898	rnaseh1	99	44.257	ENSACLG00000006741	rnaseh1	88	45.270	Astatotilapia_calliptera
ENSEBUG00000008898	rnaseh1	97	43.793	ENSAMXG00000042940	rnaseh1	95	43.793	Astyanax_mexicanus
ENSEBUG00000008898	rnaseh1	97	44.257	ENSBTAG00000016235	RNASEH1	91	44.257	Bos_taurus
ENSEBUG00000008898	rnaseh1	98	31.834	WBGene00004382	rnh-1.0	96	31.834	Caenorhabditis_elegans
ENSEBUG00000008898	rnaseh1	98	46.102	ENSCJAG00000035450	RNASEH1	90	46.102	Callithrix_jacchus
ENSEBUG00000008898	rnaseh1	97	47.387	ENSCAFG00000003259	RNASEH1	89	47.241	Canis_familiaris
ENSEBUG00000008898	rnaseh1	50	61.745	ENSCAFG00020004994	RNASEH1	96	61.745	Canis_lupus_dingo
ENSEBUG00000008898	rnaseh1	97	45.296	ENSCHIG00000022264	-	88	45.296	Capra_hircus
ENSEBUG00000008898	rnaseh1	53	44.785	ENSCHIG00000022230	-	65	44.785	Capra_hircus
ENSEBUG00000008898	rnaseh1	98	45.890	ENSTSYG00000012926	RNASEH1	89	45.890	Carlito_syrichta
ENSEBUG00000008898	rnaseh1	91	45.588	ENSCAPG00000004813	RNASEH1	97	45.588	Cavia_aperea
ENSEBUG00000008898	rnaseh1	97	47.059	ENSCPOG00000022278	Rnaseh1	86	47.059	Cavia_porcellus
ENSEBUG00000008898	rnaseh1	97	46.392	ENSCCAG00000038017	RNASEH1	89	46.392	Cebus_capucinus
ENSEBUG00000008898	rnaseh1	98	42.373	ENSCATG00000016818	-	89	42.373	Cercocebus_atys
ENSEBUG00000008898	rnaseh1	97	46.021	ENSCATG00000016515	-	89	46.021	Cercocebus_atys
ENSEBUG00000008898	rnaseh1	97	47.059	ENSCLAG00000002440	RNASEH1	89	47.059	Chinchilla_lanigera
ENSEBUG00000008898	rnaseh1	98	45.704	ENSCSAG00000006943	RNASEH1	90	45.704	Chlorocebus_sabaeus
ENSEBUG00000008898	rnaseh1	65	52.850	ENSCHOG00000008547	RNASEH1	95	52.850	Choloepus_hoffmanni
ENSEBUG00000008898	rnaseh1	98	44.257	ENSCPBG00000021620	RNASEH1	99	44.257	Chrysemys_picta_bellii
ENSEBUG00000008898	rnaseh1	99	37.543	ENSCING00000014054	-	93	37.543	Ciona_intestinalis
ENSEBUG00000008898	rnaseh1	84	35.628	ENSCSAVG00000000009	-	95	35.628	Ciona_savignyi
ENSEBUG00000008898	rnaseh1	98	46.392	ENSCANG00000037763	RNASEH1	90	46.392	Colobus_angolensis_palliatus
ENSEBUG00000008898	rnaseh1	97	45.645	ENSCGRG00001008950	Rnaseh1	89	46.367	Cricetulus_griseus_chok1gshd
ENSEBUG00000008898	rnaseh1	97	45.645	ENSCGRG00000006029	Rnaseh1	89	46.367	Cricetulus_griseus_crigri
ENSEBUG00000008898	rnaseh1	98	45.675	ENSCSEG00000005741	rnaseh1	93	46.552	Cynoglossus_semilaevis
ENSEBUG00000008898	rnaseh1	99	46.048	ENSCVAG00000018717	rnaseh1	88	46.048	Cyprinodon_variegatus
ENSEBUG00000008898	rnaseh1	98	43.493	ENSDARG00000042571	rnaseh1	96	43.493	Danio_rerio
ENSEBUG00000008898	rnaseh1	97	44.792	ENSDNOG00000016056	RNASEH1	89	44.792	Dasypus_novemcinctus
ENSEBUG00000008898	rnaseh1	98	45.329	ENSDORG00000000704	Rnaseh1	89	45.329	Dipodomys_ordii
ENSEBUG00000008898	rnaseh1	98	37.919	FBgn0023171	rnh1	93	37.919	Drosophila_melanogaster
ENSEBUG00000008898	rnaseh1	98	42.907	ENSETEG00000012674	RNASEH1	89	42.907	Echinops_telfairi
ENSEBUG00000008898	rnaseh1	97	45.139	ENSEASG00005022200	RNASEH1	87	45.139	Equus_asinus_asinus
ENSEBUG00000008898	rnaseh1	97	45.139	ENSECAG00000020695	RNASEH1	87	45.139	Equus_caballus
ENSEBUG00000008898	rnaseh1	98	46.392	ENSELUG00000010112	rnaseh1	90	46.392	Esox_lucius
ENSEBUG00000008898	rnaseh1	97	47.735	ENSFCAG00000025832	RNASEH1	88	47.735	Felis_catus
ENSEBUG00000008898	rnaseh1	98	46.823	ENSFALG00000002069	RNASEH1	92	48.161	Ficedula_albicollis
ENSEBUG00000008898	rnaseh1	97	46.367	ENSFDAG00000002035	RNASEH1	79	46.367	Fukomys_damarensis
ENSEBUG00000008898	rnaseh1	98	45.392	ENSGMOG00000013818	rnaseh1	89	45.392	Gadus_morhua
ENSEBUG00000008898	rnaseh1	98	45.791	ENSGALG00000016389	RNASEH1	92	45.791	Gallus_gallus
ENSEBUG00000008898	rnaseh1	98	43.189	ENSGAFG00000001776	rnaseh1	90	43.189	Gambusia_affinis
ENSEBUG00000008898	rnaseh1	98	44.637	ENSGACG00000011935	rnaseh1	89	44.637	Gasterosteus_aculeatus
ENSEBUG00000008898	rnaseh1	98	44.558	ENSGAGG00000009150	RNASEH1	61	45.172	Gopherus_agassizii
ENSEBUG00000008898	rnaseh1	98	46.552	ENSGGOG00000034822	RNASEH1	90	46.552	Gorilla_gorilla
ENSEBUG00000008898	rnaseh1	99	45.704	ENSHBUG00000004666	rnaseh1	88	46.735	Haplochromis_burtoni
ENSEBUG00000008898	rnaseh1	97	47.751	ENSHGLG00000002585	Rnaseh1	82	47.751	Heterocephalus_glaber_female
ENSEBUG00000008898	rnaseh1	97	47.751	ENSHGLG00100005105	Rnaseh1	82	47.751	Heterocephalus_glaber_male
ENSEBUG00000008898	rnaseh1	98	45.675	ENSHCOG00000012329	rnaseh1	88	45.675	Hippocampus_comes
ENSEBUG00000008898	rnaseh1	98	46.367	ENSIPUG00000023060	rnaseh1	96	46.367	Ictalurus_punctatus
ENSEBUG00000008898	rnaseh1	97	46.690	ENSSTOG00000012774	RNASEH1	90	46.690	Ictidomys_tridecemlineatus
ENSEBUG00000008898	rnaseh1	96	37.676	ENSJJAG00000008994	-	89	37.676	Jaculus_jaculus
ENSEBUG00000008898	rnaseh1	89	45.455	ENSJJAG00000020238	Rnaseh1	89	45.455	Jaculus_jaculus
ENSEBUG00000008898	rnaseh1	98	43.599	ENSJJAG00000021481	-	89	43.599	Jaculus_jaculus
ENSEBUG00000008898	rnaseh1	99	47.766	ENSKMAG00000001373	rnaseh1	89	47.766	Kryptolebias_marmoratus
ENSEBUG00000008898	rnaseh1	98	43.793	ENSLBEG00000004480	rnaseh1	95	43.793	Labrus_bergylta
ENSEBUG00000008898	rnaseh1	98	44.518	ENSLACG00000007100	RNASEH1	88	44.637	Latimeria_chalumnae
ENSEBUG00000008898	rnaseh1	99	45.734	ENSLOCG00000017212	rnaseh1	97	45.734	Lepisosteus_oculatus
ENSEBUG00000008898	rnaseh1	97	46.341	ENSLAFG00000015091	RNASEH1	89	46.341	Loxodonta_africana
ENSEBUG00000008898	rnaseh1	98	45.704	ENSMFAG00000000063	-	90	45.704	Macaca_fascicularis
ENSEBUG00000008898	rnaseh1	97	43.902	ENSMFAG00000002323	-	88	43.902	Macaca_fascicularis
ENSEBUG00000008898	rnaseh1	98	44.291	ENSMMUG00000019280	-	89	44.291	Macaca_mulatta
ENSEBUG00000008898	rnaseh1	98	43.599	ENSMNEG00000029676	-	89	43.599	Macaca_nemestrina
ENSEBUG00000008898	rnaseh1	98	45.704	ENSMNEG00000040183	-	90	45.704	Macaca_nemestrina
ENSEBUG00000008898	rnaseh1	97	45.329	ENSMLEG00000028662	-	88	45.329	Mandrillus_leucophaeus
ENSEBUG00000008898	rnaseh1	92	44.526	ENSMLEG00000039352	-	98	44.526	Mandrillus_leucophaeus
ENSEBUG00000008898	rnaseh1	99	46.048	ENSMAMG00000019725	rnaseh1	94	46.048	Mastacembelus_armatus
ENSEBUG00000008898	rnaseh1	99	44.257	ENSMZEG00005013006	rnaseh1	88	45.270	Maylandia_zebra
ENSEBUG00000008898	rnaseh1	89	45.926	ENSMGAG00000013979	RNASEH1	99	45.926	Meleagris_gallopavo
ENSEBUG00000008898	rnaseh1	97	47.059	ENSMAUG00000014957	Rnaseh1	89	47.059	Mesocricetus_auratus
ENSEBUG00000008898	rnaseh1	97	45.645	ENSMICG00000033156	RNASEH1	88	45.645	Microcebus_murinus
ENSEBUG00000008898	rnaseh1	97	45.361	ENSMOCG00000015522	Rnaseh1	89	45.361	Microtus_ochrogaster
ENSEBUG00000008898	rnaseh1	99	46.735	ENSMMOG00000015902	rnaseh1	88	46.735	Mola_mola
ENSEBUG00000008898	rnaseh1	57	54.167	ENSMODG00000028814	-	91	42.857	Monodelphis_domestica
ENSEBUG00000008898	rnaseh1	98	48.097	ENSMODG00000014491	-	88	48.097	Monodelphis_domestica
ENSEBUG00000008898	rnaseh1	99	47.423	ENSMALG00000010565	rnaseh1	89	47.423	Monopterus_albus
ENSEBUG00000008898	rnaseh1	97	46.021	MGP_CAROLIEiJ_G0017660	Rnaseh1	89	46.021	Mus_caroli
ENSEBUG00000008898	rnaseh1	97	46.021	ENSMUSG00000020630	Rnaseh1	89	46.021	Mus_musculus
ENSEBUG00000008898	rnaseh1	97	46.341	MGP_PahariEiJ_G0029418	Rnaseh1	89	45.675	Mus_pahari
ENSEBUG00000008898	rnaseh1	97	47.038	MGP_SPRETEiJ_G0018502	Rnaseh1	89	47.038	Mus_spretus
ENSEBUG00000008898	rnaseh1	58	59.064	ENSMPUG00000012984	RNASEH1	82	59.064	Mustela_putorius_furo
ENSEBUG00000008898	rnaseh1	97	46.918	ENSNGAG00000015966	Rnaseh1	84	46.918	Nannospalax_galili
ENSEBUG00000008898	rnaseh1	99	45.270	ENSNBRG00000008739	rnaseh1	88	45.946	Neolamprologus_brichardi
ENSEBUG00000008898	rnaseh1	98	39.792	ENSNLEG00000015400	RNASEH1	88	39.792	Nomascus_leucogenys
ENSEBUG00000008898	rnaseh1	90	39.326	ENSNLEG00000000059	-	88	39.326	Nomascus_leucogenys
ENSEBUG00000008898	rnaseh1	74	37.900	ENSMEUG00000003610	-	64	37.900	Notamacropus_eugenii
ENSEBUG00000008898	rnaseh1	98	44.637	ENSOPRG00000005072	RNASEH1	89	44.637	Ochotona_princeps
ENSEBUG00000008898	rnaseh1	97	47.405	ENSODEG00000000235	Rnaseh1	85	47.405	Octodon_degus
ENSEBUG00000008898	rnaseh1	99	45.946	ENSONIG00000018697	rnaseh1	97	45.946	Oreochromis_niloticus
ENSEBUG00000008898	rnaseh1	98	44.983	ENSOCUG00000006117	RNASEH1	90	44.983	Oryctolagus_cuniculus
ENSEBUG00000008898	rnaseh1	99	45.704	ENSORLG00000018127	rnaseh1	95	45.704	Oryzias_latipes
ENSEBUG00000008898	rnaseh1	99	45.704	ENSORLG00020013660	rnaseh1	88	45.704	Oryzias_latipes_hni
ENSEBUG00000008898	rnaseh1	99	45.704	ENSORLG00015011338	rnaseh1	88	45.704	Oryzias_latipes_hsok
ENSEBUG00000008898	rnaseh1	90	47.170	ENSOMEG00000004710	rnaseh1	89	47.170	Oryzias_melastigma
ENSEBUG00000008898	rnaseh1	98	45.890	ENSOGAG00000017176	RNASEH1	90	45.890	Otolemur_garnettii
ENSEBUG00000008898	rnaseh1	97	41.554	ENSOARG00000005386	RNASEH1	89	41.554	Ovis_aries
ENSEBUG00000008898	rnaseh1	98	47.059	ENSPPAG00000034221	RNASEH1	90	47.059	Pan_paniscus
ENSEBUG00000008898	rnaseh1	97	47.735	ENSPPRG00000015513	RNASEH1	88	47.735	Panthera_pardus
ENSEBUG00000008898	rnaseh1	92	46.125	ENSPTIG00000019034	RNASEH1	83	46.125	Panthera_tigris_altaica
ENSEBUG00000008898	rnaseh1	98	47.059	ENSPTRG00000011614	RNASEH1	90	47.059	Pan_troglodytes
ENSEBUG00000008898	rnaseh1	91	40.659	ENSPTRG00000043403	-	91	40.659	Pan_troglodytes
ENSEBUG00000008898	rnaseh1	97	43.793	ENSPANG00000018246	-	88	43.793	Papio_anubis
ENSEBUG00000008898	rnaseh1	98	45.704	ENSPANG00000000443	RNASEH1	98	44.565	Papio_anubis
ENSEBUG00000008898	rnaseh1	99	44.521	ENSPKIG00000003146	rnaseh1	98	44.521	Paramormyrops_kingsleyae
ENSEBUG00000008898	rnaseh1	98	45.517	ENSPSIG00000002937	RNASEH1	99	45.361	Pelodiscus_sinensis
ENSEBUG00000008898	rnaseh1	97	42.857	ENSPMGG00000017463	rnaseh1	89	42.857	Periophthalmus_magnuspinnatus
ENSEBUG00000008898	rnaseh1	97	45.296	ENSPEMG00000022465	-	89	44.599	Peromyscus_maniculatus_bairdii
ENSEBUG00000008898	rnaseh1	52	39.355	ENSPCIG00000026047	-	87	39.355	Phascolarctos_cinereus
ENSEBUG00000008898	rnaseh1	98	46.021	ENSPCIG00000023334	-	88	46.021	Phascolarctos_cinereus
ENSEBUG00000008898	rnaseh1	98	42.667	ENSPFOG00000002841	rnaseh1	89	42.667	Poecilia_formosa
ENSEBUG00000008898	rnaseh1	74	36.000	ENSPLAG00000021349	-	74	36.000	Poecilia_latipinna
ENSEBUG00000008898	rnaseh1	98	43.000	ENSPMEG00000016826	rnaseh1	89	43.000	Poecilia_mexicana
ENSEBUG00000008898	rnaseh1	98	46.233	ENSPREG00000012197	rnaseh1	90	46.233	Poecilia_reticulata
ENSEBUG00000008898	rnaseh1	54	59.821	ENSPPYG00000025873	RNASEH1	64	59.821	Pongo_abelii
ENSEBUG00000008898	rnaseh1	90	41.948	ENSPPYG00000008067	-	90	41.948	Pongo_abelii
ENSEBUG00000008898	rnaseh1	97	43.345	ENSPCAG00000002500	RNASEH1	89	43.345	Procavia_capensis
ENSEBUG00000008898	rnaseh1	98	42.215	ENSPCOG00000019444	RNASEH1	88	42.215	Propithecus_coquereli
ENSEBUG00000008898	rnaseh1	97	45.645	ENSPVAG00000002070	RNASEH1	89	45.645	Pteropus_vampyrus
ENSEBUG00000008898	rnaseh1	99	44.257	ENSPNYG00000001292	rnaseh1	88	45.270	Pundamilia_nyererei
ENSEBUG00000008898	rnaseh1	98	43.878	ENSPNAG00000022344	rnaseh1	89	43.878	Pygocentrus_nattereri
ENSEBUG00000008898	rnaseh1	97	46.367	ENSRNOG00000008584	Rnaseh1	89	46.367	Rattus_norvegicus
ENSEBUG00000008898	rnaseh1	98	45.704	ENSRBIG00000034222	RNASEH1	89	45.704	Rhinopithecus_bieti
ENSEBUG00000008898	rnaseh1	98	45.704	ENSRROG00000041761	RNASEH1	89	45.704	Rhinopithecus_roxellana
ENSEBUG00000008898	rnaseh1	97	46.441	ENSSBOG00000025411	RNASEH1	89	46.441	Saimiri_boliviensis_boliviensis
ENSEBUG00000008898	rnaseh1	98	48.097	ENSSHAG00000013051	RNASEH1	87	48.097	Sarcophilus_harrisii
ENSEBUG00000008898	rnaseh1	99	43.333	ENSSFOG00015002709	rnaseh1	91	45.791	Scleropages_formosus
ENSEBUG00000008898	rnaseh1	99	45.361	ENSSMAG00000007586	rnaseh1	88	46.102	Scophthalmus_maximus
ENSEBUG00000008898	rnaseh1	99	44.558	ENSSDUG00000008217	rnaseh1	94	44.558	Seriola_dumerili
ENSEBUG00000008898	rnaseh1	93	44.765	ENSSLDG00000000442	rnaseh1	94	44.765	Seriola_lalandi_dorsalis
ENSEBUG00000008898	rnaseh1	98	47.405	ENSSPUG00000006644	RNASEH1	92	47.405	Sphenodon_punctatus
ENSEBUG00000008898	rnaseh1	99	46.048	ENSSPAG00000009353	rnaseh1	88	46.048	Stegastes_partitus
ENSEBUG00000008898	rnaseh1	98	44.637	ENSSSCG00000025305	RNASEH1	89	44.637	Sus_scrofa
ENSEBUG00000008898	rnaseh1	98	47.297	ENSTGUG00000012980	RNASEH1	92	47.297	Taeniopygia_guttata
ENSEBUG00000008898	rnaseh1	98	46.021	ENSTRUG00000015774	rnaseh1	95	46.021	Takifugu_rubripes
ENSEBUG00000008898	rnaseh1	98	46.207	ENSTNIG00000010715	rnaseh1	95	46.207	Tetraodon_nigroviridis
ENSEBUG00000008898	rnaseh1	97	43.403	ENSTTRG00000001615	RNASEH1	88	43.403	Tursiops_truncatus
ENSEBUG00000008898	rnaseh1	50	62.416	ENSUAMG00000018254	RNASEH1	77	62.416	Ursus_americanus
ENSEBUG00000008898	rnaseh1	78	44.348	ENSUMAG00000003941	RNASEH1	65	44.348	Ursus_maritimus
ENSEBUG00000008898	rnaseh1	98	37.755	ENSVPAG00000011589	RNASEH1	89	37.755	Vicugna_pacos
ENSEBUG00000008898	rnaseh1	97	47.735	ENSVVUG00000008633	RNASEH1	79	47.735	Vulpes_vulpes
ENSEBUG00000008898	rnaseh1	98	48.966	ENSXETG00000001212	rnaseh1	99	56.291	Xenopus_tropicalis
ENSEBUG00000008898	rnaseh1	80	53.704	ENSXETG00000030371	-	99	53.704	Xenopus_tropicalis
ENSEBUG00000008898	rnaseh1	99	43.377	ENSXMAG00000002357	rnaseh1	90	43.377	Xiphophorus_maculatus