EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000008902 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-117n7.8
Alias: -
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 122361 bases
Position: chrFYBX02010818.1:176657-299017
Accession: 25521
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000014169	S1	PF00575.23	1.6e-10	1	1
ENSEBUP00000014119	S1	PF00575.23	4.2e-05	1	1
ENSEBUP00000014146	S1	PF00575.23	5.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000014722	-	4833	-	ENSEBUP00000014146	780 (aa)	-	-
ENSEBUT00000014695	-	4817	-	ENSEBUP00000014119	757 (aa)	-	-
ENSEBUT00000014745	-	4673	-	ENSEBUP00000014169	749 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000008902's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000008902's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000008902	si:ch211-117n7.8	96	48.571	ENSG00000068784	SRBD1	73	48.571	Homo_sapiens
ENSEBUG00000008902	si:ch211-117n7.8	95	48.760	ENSAPOG00000005103	si:ch211-117n7.8	72	48.623	Acanthochromis_polyacanthus
ENSEBUG00000008902	si:ch211-117n7.8	96	47.956	ENSAMEG00000005993	SRBD1	73	47.956	Ailuropoda_melanoleuca
ENSEBUG00000008902	si:ch211-117n7.8	95	47.880	ENSACIG00000009875	si:ch211-117n7.8	73	48.153	Amphilophus_citrinellus
ENSEBUG00000008902	si:ch211-117n7.8	95	48.828	ENSAOCG00000024718	si:ch211-117n7.8	73	48.760	Amphiprion_ocellaris
ENSEBUG00000008902	si:ch211-117n7.8	96	48.764	ENSAPEG00000002645	si:ch211-117n7.8	75	48.764	Amphiprion_percula
ENSEBUG00000008902	si:ch211-117n7.8	95	48.760	ENSATEG00000010844	si:ch211-117n7.8	73	48.760	Anabas_testudineus
ENSEBUG00000008902	si:ch211-117n7.8	96	48.980	ENSAPLG00000006313	SRBD1	73	48.980	Anas_platyrhynchos
ENSEBUG00000008902	si:ch211-117n7.8	96	48.707	ENSANAG00000025573	SRBD1	73	48.707	Aotus_nancymaae
ENSEBUG00000008902	si:ch211-117n7.8	95	46.768	ENSACLG00000024219	si:ch211-117n7.8	71	46.768	Astatotilapia_calliptera
ENSEBUG00000008902	si:ch211-117n7.8	96	49.861	ENSAMXG00000004294	SRBD1	72	50.069	Astyanax_mexicanus
ENSEBUG00000008902	si:ch211-117n7.8	96	48.777	ENSBTAG00000007508	SRBD1	71	48.777	Bos_taurus
ENSEBUG00000008902	si:ch211-117n7.8	85	30.243	WBGene00022830	ZK973.1	80	30.243	Caenorhabditis_elegans
ENSEBUG00000008902	si:ch211-117n7.8	96	48.844	ENSCJAG00000000727	SRBD1	73	48.844	Callithrix_jacchus
ENSEBUG00000008902	si:ch211-117n7.8	96	47.761	ENSCAFG00000002554	SRBD1	73	47.761	Canis_familiaris
ENSEBUG00000008902	si:ch211-117n7.8	96	48.481	ENSCAFG00020026284	SRBD1	84	48.481	Canis_lupus_dingo
ENSEBUG00000008902	si:ch211-117n7.8	96	48.641	ENSCHIG00000016535	SRBD1	72	48.641	Capra_hircus
ENSEBUG00000008902	si:ch211-117n7.8	96	47.967	ENSTSYG00000012797	SRBD1	73	47.967	Carlito_syrichta
ENSEBUG00000008902	si:ch211-117n7.8	96	47.862	ENSCPOG00000004773	SRBD1	74	47.554	Cavia_porcellus
ENSEBUG00000008902	si:ch211-117n7.8	96	49.116	ENSCCAG00000025589	SRBD1	73	49.116	Cebus_capucinus
ENSEBUG00000008902	si:ch211-117n7.8	96	49.116	ENSCATG00000039530	SRBD1	73	49.116	Cercocebus_atys
ENSEBUG00000008902	si:ch211-117n7.8	96	48.690	ENSCLAG00000008623	SRBD1	73	48.690	Chinchilla_lanigera
ENSEBUG00000008902	si:ch211-117n7.8	96	49.116	ENSCSAG00000013350	SRBD1	73	49.116	Chlorocebus_sabaeus
ENSEBUG00000008902	si:ch211-117n7.8	96	49.319	ENSCPBG00000005677	SRBD1	74	49.319	Chrysemys_picta_bellii
ENSEBUG00000008902	si:ch211-117n7.8	96	39.945	ENSCING00000005950	-	92	39.945	Ciona_intestinalis
ENSEBUG00000008902	si:ch211-117n7.8	96	38.781	ENSCSAVG00000000861	-	90	38.781	Ciona_savignyi
ENSEBUG00000008902	si:ch211-117n7.8	96	48.980	ENSCANG00000016307	SRBD1	73	48.980	Colobus_angolensis_palliatus
ENSEBUG00000008902	si:ch211-117n7.8	96	48.153	ENSCGRG00001000513	Srbd1	73	48.153	Cricetulus_griseus_chok1gshd
ENSEBUG00000008902	si:ch211-117n7.8	96	48.153	ENSCGRG00000002283	Srbd1	73	48.153	Cricetulus_griseus_crigri
ENSEBUG00000008902	si:ch211-117n7.8	96	46.648	ENSCSEG00000000856	si:ch211-117n7.8	73	46.648	Cynoglossus_semilaevis
ENSEBUG00000008902	si:ch211-117n7.8	95	47.874	ENSCVAG00000020212	si:ch211-117n7.8	77	47.874	Cyprinodon_variegatus
ENSEBUG00000008902	si:ch211-117n7.8	96	47.767	ENSDNOG00000018686	SRBD1	73	47.767	Dasypus_novemcinctus
ENSEBUG00000008902	si:ch211-117n7.8	98	47.510	ENSDORG00000010468	Srbd1	74	47.510	Dipodomys_ordii
ENSEBUG00000008902	si:ch211-117n7.8	95	35.319	FBgn0051156	CG31156	71	36.068	Drosophila_melanogaster
ENSEBUG00000008902	si:ch211-117n7.8	72	45.000	ENSETEG00000000739	SRBD1	57	45.357	Echinops_telfairi
ENSEBUG00000008902	si:ch211-117n7.8	100	46.589	ENSEASG00005003132	SRBD1	98	43.494	Equus_asinus_asinus
ENSEBUG00000008902	si:ch211-117n7.8	96	48.777	ENSECAG00000013865	SRBD1	72	48.777	Equus_caballus
ENSEBUG00000008902	si:ch211-117n7.8	98	48.108	ENSELUG00000012592	si:ch211-117n7.8	71	48.108	Esox_lucius
ENSEBUG00000008902	si:ch211-117n7.8	96	48.098	ENSFCAG00000005101	SRBD1	73	48.098	Felis_catus
ENSEBUG00000008902	si:ch211-117n7.8	96	48.697	ENSFALG00000012966	SRBD1	74	48.697	Ficedula_albicollis
ENSEBUG00000008902	si:ch211-117n7.8	96	48.343	ENSFDAG00000016670	SRBD1	74	48.343	Fukomys_damarensis
ENSEBUG00000008902	si:ch211-117n7.8	95	47.658	ENSFHEG00000019480	si:ch211-117n7.8	71	47.658	Fundulus_heteroclitus
ENSEBUG00000008902	si:ch211-117n7.8	56	45.688	ENSGMOG00000018010	-	87	45.688	Gadus_morhua
ENSEBUG00000008902	si:ch211-117n7.8	96	48.634	ENSGALG00000009990	SRBD1	74	48.634	Gallus_gallus
ENSEBUG00000008902	si:ch211-117n7.8	95	48.623	ENSGAFG00000019664	si:ch211-117n7.8	72	48.623	Gambusia_affinis
ENSEBUG00000008902	si:ch211-117n7.8	82	48.113	ENSGACG00000010794	si:ch211-117n7.8	100	48.428	Gasterosteus_aculeatus
ENSEBUG00000008902	si:ch211-117n7.8	96	49.183	ENSGAGG00000006166	SRBD1	87	49.183	Gopherus_agassizii
ENSEBUG00000008902	si:ch211-117n7.8	96	48.844	ENSGGOG00000005910	SRBD1	75	48.980	Gorilla_gorilla
ENSEBUG00000008902	si:ch211-117n7.8	100	42.023	ENSHBUG00000013207	si:ch211-117n7.8	80	42.023	Haplochromis_burtoni
ENSEBUG00000008902	si:ch211-117n7.8	96	48.082	ENSHGLG00000018153	-	73	48.082	Heterocephalus_glaber_female
ENSEBUG00000008902	si:ch211-117n7.8	96	48.082	ENSHGLG00100015183	-	73	48.082	Heterocephalus_glaber_male
ENSEBUG00000008902	si:ch211-117n7.8	96	48.615	ENSIPUG00000009661	srbd1	74	48.615	Ictalurus_punctatus
ENSEBUG00000008902	si:ch211-117n7.8	96	48.219	ENSSTOG00000005898	SRBD1	73	48.219	Ictidomys_tridecemlineatus
ENSEBUG00000008902	si:ch211-117n7.8	96	46.914	ENSJJAG00000022244	Srbd1	73	46.914	Jaculus_jaculus
ENSEBUG00000008902	si:ch211-117n7.8	95	47.383	ENSKMAG00000003473	si:ch211-117n7.8	72	47.383	Kryptolebias_marmoratus
ENSEBUG00000008902	si:ch211-117n7.8	96	49.033	ENSLBEG00000027518	si:ch211-117n7.8	71	49.033	Labrus_bergylta
ENSEBUG00000008902	si:ch211-117n7.8	96	49.113	ENSLACG00000009790	SRBD1	85	49.113	Latimeria_chalumnae
ENSEBUG00000008902	si:ch211-117n7.8	96	48.901	ENSLOCG00000016360	si:ch211-117n7.8	73	48.901	Lepisosteus_oculatus
ENSEBUG00000008902	si:ch211-117n7.8	96	49.116	ENSMFAG00000042026	SRBD1	73	49.116	Macaca_fascicularis
ENSEBUG00000008902	si:ch211-117n7.8	96	49.116	ENSMMUG00000003490	SRBD1	73	49.116	Macaca_mulatta
ENSEBUG00000008902	si:ch211-117n7.8	96	48.103	ENSMNEG00000034701	SRBD1	73	48.103	Macaca_nemestrina
ENSEBUG00000008902	si:ch211-117n7.8	96	49.116	ENSMLEG00000000745	SRBD1	73	49.116	Mandrillus_leucophaeus
ENSEBUG00000008902	si:ch211-117n7.8	95	48.276	ENSMAMG00000021921	si:ch211-117n7.8	73	48.276	Mastacembelus_armatus
ENSEBUG00000008902	si:ch211-117n7.8	95	46.768	ENSMZEG00005027369	si:ch211-117n7.8	71	46.768	Maylandia_zebra
ENSEBUG00000008902	si:ch211-117n7.8	96	48.638	ENSMGAG00000010273	SRBD1	91	48.638	Meleagris_gallopavo
ENSEBUG00000008902	si:ch211-117n7.8	96	46.509	ENSMAUG00000013916	Srbd1	89	46.509	Mesocricetus_auratus
ENSEBUG00000008902	si:ch211-117n7.8	96	48.163	ENSMICG00000007835	SRBD1	73	48.163	Microcebus_murinus
ENSEBUG00000008902	si:ch211-117n7.8	96	48.365	ENSMOCG00000018716	Srbd1	73	48.365	Microtus_ochrogaster
ENSEBUG00000008902	si:ch211-117n7.8	99	46.676	ENSMMOG00000007507	si:ch211-117n7.8	78	46.676	Mola_mola
ENSEBUG00000008902	si:ch211-117n7.8	95	48.209	ENSMALG00000001562	si:ch211-117n7.8	72	48.209	Monopterus_albus
ENSEBUG00000008902	si:ch211-117n7.8	96	48.764	MGP_CAROLIEiJ_G0021934	Srbd1	99	46.580	Mus_caroli
ENSEBUG00000008902	si:ch211-117n7.8	96	48.493	ENSMUSG00000024135	Srbd1	98	45.361	Mus_musculus
ENSEBUG00000008902	si:ch211-117n7.8	96	48.356	MGP_PahariEiJ_G0020924	Srbd1	73	48.356	Mus_pahari
ENSEBUG00000008902	si:ch211-117n7.8	96	48.493	MGP_SPRETEiJ_G0022850	Srbd1	73	48.493	Mus_spretus
ENSEBUG00000008902	si:ch211-117n7.8	96	48.505	ENSMLUG00000007039	SRBD1	73	48.505	Myotis_lucifugus
ENSEBUG00000008902	si:ch211-117n7.8	96	46.764	ENSNGAG00000011893	Srbd1	74	46.764	Nannospalax_galili
ENSEBUG00000008902	si:ch211-117n7.8	95	47.018	ENSNBRG00000012873	si:ch211-117n7.8	75	46.879	Neolamprologus_brichardi
ENSEBUG00000008902	si:ch211-117n7.8	96	48.571	ENSNLEG00000016877	SRBD1	73	48.571	Nomascus_leucogenys
ENSEBUG00000008902	si:ch211-117n7.8	96	48.000	ENSODEG00000012095	SRBD1	74	48.000	Octodon_degus
ENSEBUG00000008902	si:ch211-117n7.8	96	46.594	ENSONIG00000000945	si:ch211-117n7.8	87	46.676	Oreochromis_niloticus
ENSEBUG00000008902	si:ch211-117n7.8	96	48.777	ENSOCUG00000015385	SRBD1	73	48.777	Oryctolagus_cuniculus
ENSEBUG00000008902	si:ch211-117n7.8	95	45.179	ENSORLG00000004427	si:ch211-117n7.8	70	45.179	Oryzias_latipes
ENSEBUG00000008902	si:ch211-117n7.8	95	47.808	ENSORLG00020012792	si:ch211-117n7.8	71	47.737	Oryzias_latipes_hni
ENSEBUG00000008902	si:ch211-117n7.8	95	47.658	ENSORLG00015018598	si:ch211-117n7.8	71	47.658	Oryzias_latipes_hsok
ENSEBUG00000008902	si:ch211-117n7.8	95	47.790	ENSOMEG00000012229	si:ch211-117n7.8	71	48.133	Oryzias_melastigma
ENSEBUG00000008902	si:ch211-117n7.8	96	47.147	ENSOGAG00000001076	SRBD1	73	47.147	Otolemur_garnettii
ENSEBUG00000008902	si:ch211-117n7.8	96	45.136	ENSOARG00000005958	SRBD1	74	45.136	Ovis_aries
ENSEBUG00000008902	si:ch211-117n7.8	96	48.707	ENSPPAG00000038442	SRBD1	73	48.707	Pan_paniscus
ENSEBUG00000008902	si:ch211-117n7.8	96	48.435	ENSPPRG00000003449	SRBD1	73	48.435	Panthera_pardus
ENSEBUG00000008902	si:ch211-117n7.8	96	48.299	ENSPTIG00000012495	SRBD1	73	48.299	Panthera_tigris_altaica
ENSEBUG00000008902	si:ch211-117n7.8	96	48.844	ENSPTRG00000011889	SRBD1	73	48.844	Pan_troglodytes
ENSEBUG00000008902	si:ch211-117n7.8	96	49.252	ENSPANG00000008063	SRBD1	73	49.252	Papio_anubis
ENSEBUG00000008902	si:ch211-117n7.8	95	48.611	ENSPKIG00000021973	si:ch211-117n7.8	73	48.611	Paramormyrops_kingsleyae
ENSEBUG00000008902	si:ch211-117n7.8	96	49.319	ENSPSIG00000008992	SRBD1	74	49.319	Pelodiscus_sinensis
ENSEBUG00000008902	si:ch211-117n7.8	95	48.414	ENSPMGG00000013348	si:ch211-117n7.8	75	48.556	Periophthalmus_magnuspinnatus
ENSEBUG00000008902	si:ch211-117n7.8	96	46.871	ENSPEMG00000020684	Srbd1	73	46.871	Peromyscus_maniculatus_bairdii
ENSEBUG00000008902	si:ch211-117n7.8	95	48.485	ENSPFOG00000010650	si:ch211-117n7.8	72	48.485	Poecilia_formosa
ENSEBUG00000008902	si:ch211-117n7.8	95	48.485	ENSPLAG00000002141	si:ch211-117n7.8	72	48.485	Poecilia_latipinna
ENSEBUG00000008902	si:ch211-117n7.8	95	48.485	ENSPMEG00000018537	si:ch211-117n7.8	72	48.485	Poecilia_mexicana
ENSEBUG00000008902	si:ch211-117n7.8	95	48.352	ENSPREG00000003258	si:ch211-117n7.8	74	48.352	Poecilia_reticulata
ENSEBUG00000008902	si:ch211-117n7.8	96	41.960	ENSPPYG00000012444	SRBD1	73	41.960	Pongo_abelii
ENSEBUG00000008902	si:ch211-117n7.8	93	42.390	ENSPCAG00000005629	SRBD1	74	42.390	Procavia_capensis
ENSEBUG00000008902	si:ch211-117n7.8	96	42.486	ENSPCOG00000017669	SRBD1	72	42.486	Propithecus_coquereli
ENSEBUG00000008902	si:ch211-117n7.8	96	45.293	ENSPVAG00000001782	SRBD1	73	45.293	Pteropus_vampyrus
ENSEBUG00000008902	si:ch211-117n7.8	95	46.648	ENSPNYG00000000508	si:ch211-117n7.8	74	46.648	Pundamilia_nyererei
ENSEBUG00000008902	si:ch211-117n7.8	96	49.723	ENSPNAG00000013492	SRBD1	73	49.723	Pygocentrus_nattereri
ENSEBUG00000008902	si:ch211-117n7.8	96	47.945	ENSRNOG00000014720	Srbd1	73	47.684	Rattus_norvegicus
ENSEBUG00000008902	si:ch211-117n7.8	96	48.844	ENSRBIG00000033486	SRBD1	73	48.844	Rhinopithecus_bieti
ENSEBUG00000008902	si:ch211-117n7.8	96	48.844	ENSRROG00000041599	SRBD1	73	48.844	Rhinopithecus_roxellana
ENSEBUG00000008902	si:ch211-117n7.8	96	48.844	ENSSBOG00000024982	SRBD1	73	48.844	Saimiri_boliviensis_boliviensis
ENSEBUG00000008902	si:ch211-117n7.8	96	48.556	ENSSFOG00015001128	si:ch211-117n7.8	78	48.556	Scleropages_formosus
ENSEBUG00000008902	si:ch211-117n7.8	95	47.521	ENSSMAG00000018256	si:ch211-117n7.8	71	47.802	Scophthalmus_maximus
ENSEBUG00000008902	si:ch211-117n7.8	95	48.077	ENSSLDG00000023189	si:ch211-117n7.8	72	48.077	Seriola_lalandi_dorsalis
ENSEBUG00000008902	si:ch211-117n7.8	96	44.475	ENSSARG00000009740	SRBD1	74	44.475	Sorex_araneus
ENSEBUG00000008902	si:ch211-117n7.8	96	48.214	ENSSPUG00000010475	SRBD1	80	48.214	Sphenodon_punctatus
ENSEBUG00000008902	si:ch211-117n7.8	95	47.383	ENSSPAG00000008092	-	72	47.180	Stegastes_partitus
ENSEBUG00000008902	si:ch211-117n7.8	96	48.234	ENSSSCG00000008445	SRBD1	72	48.234	Sus_scrofa
ENSEBUG00000008902	si:ch211-117n7.8	96	49.660	ENSTGUG00000003878	SRBD1	87	49.660	Taeniopygia_guttata
ENSEBUG00000008902	si:ch211-117n7.8	95	48.209	ENSTRUG00000007080	si:ch211-117n7.8	80	48.560	Takifugu_rubripes
ENSEBUG00000008902	si:ch211-117n7.8	95	47.956	ENSTNIG00000007464	si:ch211-117n7.8	72	47.956	Tetraodon_nigroviridis
ENSEBUG00000008902	si:ch211-117n7.8	70	70.213	ENSTBEG00000004556	SRBD1	53	70.213	Tupaia_belangeri
ENSEBUG00000008902	si:ch211-117n7.8	86	51.747	ENSTTRG00000011871	SRBD1	65	51.747	Tursiops_truncatus
ENSEBUG00000008902	si:ch211-117n7.8	96	48.098	ENSUAMG00000008126	SRBD1	97	42.754	Ursus_americanus
ENSEBUG00000008902	si:ch211-117n7.8	96	48.098	ENSUMAG00000012902	SRBD1	72	48.098	Ursus_maritimus
ENSEBUG00000008902	si:ch211-117n7.8	96	48.980	ENSVPAG00000006825	SRBD1	80	48.980	Vicugna_pacos
ENSEBUG00000008902	si:ch211-117n7.8	96	47.826	ENSVVUG00000005389	SRBD1	73	47.826	Vulpes_vulpes
ENSEBUG00000008902	si:ch211-117n7.8	96	39.382	ENSXETG00000002760	srbd1	74	39.309	Xenopus_tropicalis
ENSEBUG00000008902	si:ch211-117n7.8	95	48.623	ENSXMAG00000016861	si:ch211-117n7.8	72	48.623	Xiphophorus_maculatus