EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000009104 (Gene tree)
Gene ID: -
Gene Symbol: rad54b
Alias: im:7137737|im:7153525
Full Name: RAD54 homolog B
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 76810 bases
Position: chrFYBX02009748.1:840187-916996
Accession: ZDB-GENE-060810-50
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000014471	ResIII	PF04851.15	7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000015047	-	2676	-	ENSEBUP00000014471	891 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000009104's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000009104's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000009104	rad54b	53	30.989	ENSEBUG00000003969	smarcad1a	73	30.469
ENSEBUG00000009104	rad54b	56	32.177	ENSEBUG00000005791	chd1l	59	31.870

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000009104	rad54b	99	46.316	ENSG00000197275	RAD54B	99	45.798	Homo_sapiens
ENSEBUG00000009104	rad54b	78	49.064	ENSG00000265817	FSBP	100	49.064	Homo_sapiens
ENSEBUG00000009104	rad54b	98	47.172	ENSAMEG00000005834	-	99	47.267	Ailuropoda_melanoleuca
ENSEBUG00000009104	rad54b	98	47.123	ENSACIG00000013005	rad54b	99	47.123	Amphilophus_citrinellus
ENSEBUG00000009104	rad54b	98	46.406	ENSAOCG00000008523	rad54b	99	46.779	Amphiprion_ocellaris
ENSEBUG00000009104	rad54b	98	48.079	ENSAPEG00000001673	rad54b	99	48.132	Amphiprion_percula
ENSEBUG00000009104	rad54b	98	47.619	ENSATEG00000001527	rad54b	99	47.671	Anabas_testudineus
ENSEBUG00000009104	rad54b	98	47.476	ENSAPLG00000014366	-	99	47.476	Anas_platyrhynchos
ENSEBUG00000009104	rad54b	85	50.000	ENSACAG00000003671	-	99	50.000	Anolis_carolinensis
ENSEBUG00000009104	rad54b	71	50.685	ENSANAG00000019528	-	99	50.685	Aotus_nancymaae
ENSEBUG00000009104	rad54b	86	50.918	ENSACLG00000007826	rad54b	92	50.730	Astatotilapia_calliptera
ENSEBUG00000009104	rad54b	83	50.958	ENSAMXG00000039985	rad54b	95	50.441	Astyanax_mexicanus
ENSEBUG00000009104	rad54b	98	46.187	ENSBTAG00000000632	RAD54B	99	46.262	Bos_taurus
ENSEBUG00000009104	rad54b	61	38.772	WBGene00013792	Y116A8C.13	71	38.772	Caenorhabditis_elegans
ENSEBUG00000009104	rad54b	98	46.383	ENSCJAG00000000080	-	99	49.322	Callithrix_jacchus
ENSEBUG00000009104	rad54b	98	47.696	ENSCAFG00000009179	RAD54B	99	47.696	Canis_familiaris
ENSEBUG00000009104	rad54b	98	47.696	ENSCAFG00020012084	-	99	47.696	Canis_lupus_dingo
ENSEBUG00000009104	rad54b	98	46.444	ENSCHIG00000008230	-	99	46.479	Capra_hircus
ENSEBUG00000009104	rad54b	98	47.458	ENSTSYG00000013234	-	99	47.458	Carlito_syrichta
ENSEBUG00000009104	rad54b	98	47.430	ENSCPOG00000011643	-	99	47.178	Cavia_porcellus
ENSEBUG00000009104	rad54b	98	46.574	ENSCCAG00000011754	-	99	49.523	Cebus_capucinus
ENSEBUG00000009104	rad54b	99	46.667	ENSCATG00000030661	-	100	49.256	Cercocebus_atys
ENSEBUG00000009104	rad54b	98	48.168	ENSCLAG00000010476	-	99	48.276	Chinchilla_lanigera
ENSEBUG00000009104	rad54b	98	46.587	ENSCSAG00000012712	-	99	46.818	Chlorocebus_sabaeus
ENSEBUG00000009104	rad54b	98	47.184	ENSCPBG00000003204	-	98	48.786	Chrysemys_picta_bellii
ENSEBUG00000009104	rad54b	99	46.360	ENSCANG00000017939	-	100	48.856	Colobus_angolensis_palliatus
ENSEBUG00000009104	rad54b	99	45.299	ENSCGRG00001020184	Rad54b	99	45.192	Cricetulus_griseus_chok1gshd
ENSEBUG00000009104	rad54b	99	44.872	ENSCGRG00000016752	Rad54b	99	44.872	Cricetulus_griseus_crigri
ENSEBUG00000009104	rad54b	84	51.256	ENSCSEG00000001601	rad54b	93	51.256	Cynoglossus_semilaevis
ENSEBUG00000009104	rad54b	98	47.784	ENSCVAG00000009200	rad54b	99	47.784	Cyprinodon_variegatus
ENSEBUG00000009104	rad54b	99	46.941	ENSDARG00000092134	rad54b	100	52.496	Danio_rerio
ENSEBUG00000009104	rad54b	98	46.055	ENSDNOG00000015535	-	99	46.378	Dasypus_novemcinctus
ENSEBUG00000009104	rad54b	98	46.932	ENSDORG00000002492	Rad54b	99	46.932	Dipodomys_ordii
ENSEBUG00000009104	rad54b	86	48.015	ENSETEG00000010605	-	100	48.010	Echinops_telfairi
ENSEBUG00000009104	rad54b	86	49.877	ENSEASG00005004021	-	90	49.754	Equus_asinus_asinus
ENSEBUG00000009104	rad54b	98	46.638	ENSECAG00000021949	-	99	46.559	Equus_caballus
ENSEBUG00000009104	rad54b	70	44.489	ENSEEUG00000008056	-	72	44.489	Erinaceus_europaeus
ENSEBUG00000009104	rad54b	99	46.519	ENSELUG00000009287	rad54b	99	46.786	Esox_lucius
ENSEBUG00000009104	rad54b	98	46.939	ENSFCAG00000015513	-	99	50.340	Felis_catus
ENSEBUG00000009104	rad54b	98	46.888	ENSFALG00000005467	-	99	46.402	Ficedula_albicollis
ENSEBUG00000009104	rad54b	98	47.594	ENSFDAG00000020541	-	99	47.414	Fukomys_damarensis
ENSEBUG00000009104	rad54b	84	50.000	ENSFHEG00000014382	rad54b	86	49.938	Fundulus_heteroclitus
ENSEBUG00000009104	rad54b	83	49.627	ENSGMOG00000014774	rad54b	98	49.627	Gadus_morhua
ENSEBUG00000009104	rad54b	98	46.788	ENSGALG00000043597	RAD54B	99	46.788	Gallus_gallus
ENSEBUG00000009104	rad54b	99	47.077	ENSGAFG00000007901	rad54b	100	46.826	Gambusia_affinis
ENSEBUG00000009104	rad54b	84	50.500	ENSGACG00000009128	rad54b	99	46.398	Gasterosteus_aculeatus
ENSEBUG00000009104	rad54b	98	47.564	ENSGAGG00000018747	-	99	47.564	Gopherus_agassizii
ENSEBUG00000009104	rad54b	98	46.561	ENSGGOG00000023516	-	99	46.162	Gorilla_gorilla
ENSEBUG00000009104	rad54b	98	46.829	ENSHBUG00000016017	rad54b	98	46.835	Haplochromis_burtoni
ENSEBUG00000009104	rad54b	98	47.115	ENSHGLG00000008263	RAD54B	99	46.902	Heterocephalus_glaber_female
ENSEBUG00000009104	rad54b	98	46.497	ENSHGLG00100008108	-	99	46.285	Heterocephalus_glaber_male
ENSEBUG00000009104	rad54b	98	45.134	ENSHCOG00000004764	rad54b	98	47.102	Hippocampus_comes
ENSEBUG00000009104	rad54b	98	46.793	ENSIPUG00000018531	rad54b	83	51.250	Ictalurus_punctatus
ENSEBUG00000009104	rad54b	98	46.088	ENSSTOG00000010791	-	99	46.502	Ictidomys_tridecemlineatus
ENSEBUG00000009104	rad54b	99	46.882	ENSJJAG00000010314	Rad54b	99	46.976	Jaculus_jaculus
ENSEBUG00000009104	rad54b	86	50.308	ENSKMAG00000004744	rad54b	94	50.308	Kryptolebias_marmoratus
ENSEBUG00000009104	rad54b	79	52.972	ENSLACG00000000859	-	99	52.972	Latimeria_chalumnae
ENSEBUG00000009104	rad54b	99	48.586	ENSLOCG00000010100	rad54b	99	48.726	Lepisosteus_oculatus
ENSEBUG00000009104	rad54b	84	49.308	ENSLAFG00000015315	-	97	49.308	Loxodonta_africana
ENSEBUG00000009104	rad54b	99	46.452	ENSMFAG00000031629	-	100	48.985	Macaca_fascicularis
ENSEBUG00000009104	rad54b	99	46.452	ENSMMUG00000005659	-	99	45.833	Macaca_mulatta
ENSEBUG00000009104	rad54b	99	46.394	ENSMNEG00000016408	-	99	46.421	Macaca_nemestrina
ENSEBUG00000009104	rad54b	99	46.559	ENSMLEG00000006946	-	99	45.940	Mandrillus_leucophaeus
ENSEBUG00000009104	rad54b	98	46.908	ENSMAMG00000012269	rad54b	99	46.908	Mastacembelus_armatus
ENSEBUG00000009104	rad54b	98	46.934	ENSMZEG00005005281	rad54b	99	46.941	Maylandia_zebra
ENSEBUG00000009104	rad54b	99	46.162	ENSMGAG00000012024	-	99	46.372	Meleagris_gallopavo
ENSEBUG00000009104	rad54b	99	45.552	ENSMAUG00000013586	Rad54b	99	45.552	Mesocricetus_auratus
ENSEBUG00000009104	rad54b	87	50.305	ENSMICG00000000754	-	93	50.305	Microcebus_murinus
ENSEBUG00000009104	rad54b	99	46.888	ENSMOCG00000020035	Rad54b	88	50.374	Microtus_ochrogaster
ENSEBUG00000009104	rad54b	84	49.499	ENSMMOG00000003394	rad54b	89	49.499	Mola_mola
ENSEBUG00000009104	rad54b	86	49.015	ENSMODG00000007343	-	99	49.015	Monodelphis_domestica
ENSEBUG00000009104	rad54b	70	50.850	ENSMALG00000001520	rad54b	99	50.850	Monopterus_albus
ENSEBUG00000009104	rad54b	99	46.781	MGP_CAROLIEiJ_G0025810	Rad54b	100	46.875	Mus_caroli
ENSEBUG00000009104	rad54b	99	46.888	ENSMUSG00000078773	Rad54b	100	47.027	Mus_musculus
ENSEBUG00000009104	rad54b	99	46.659	MGP_PahariEiJ_G0023933	Rad54b	100	46.659	Mus_pahari
ENSEBUG00000009104	rad54b	99	46.674	MGP_SPRETEiJ_G0026758	Rad54b	100	46.811	Mus_spretus
ENSEBUG00000009104	rad54b	86	50.122	ENSMPUG00000008878	-	99	50.244	Mustela_putorius_furo
ENSEBUG00000009104	rad54b	99	47.619	ENSMLUG00000008953	-	100	47.619	Myotis_lucifugus
ENSEBUG00000009104	rad54b	99	46.688	ENSNGAG00000017537	Rad54b	99	46.688	Nannospalax_galili
ENSEBUG00000009104	rad54b	86	50.547	ENSNBRG00000013394	rad54b	92	50.608	Neolamprologus_brichardi
ENSEBUG00000009104	rad54b	99	47.021	ENSNLEG00000003062	-	99	49.328	Nomascus_leucogenys
ENSEBUG00000009104	rad54b	64	51.697	ENSMEUG00000012426	-	66	51.697	Notamacropus_eugenii
ENSEBUG00000009104	rad54b	86	47.975	ENSODEG00000002650	-	99	47.975	Octodon_degus
ENSEBUG00000009104	rad54b	98	47.033	ENSODEG00000019564	-	99	47.033	Octodon_degus
ENSEBUG00000009104	rad54b	98	46.960	ENSONIG00000006067	rad54b	99	46.806	Oreochromis_niloticus
ENSEBUG00000009104	rad54b	80	50.131	ENSOANG00000011348	-	99	50.131	Ornithorhynchus_anatinus
ENSEBUG00000009104	rad54b	99	46.610	ENSOCUG00000016478	-	100	46.391	Oryctolagus_cuniculus
ENSEBUG00000009104	rad54b	98	46.436	ENSORLG00000008918	rad54b	99	51.677	Oryzias_latipes
ENSEBUG00000009104	rad54b	70	51.524	ENSORLG00020012171	rad54b	99	51.294	Oryzias_latipes_hni
ENSEBUG00000009104	rad54b	98	46.583	ENSORLG00015018536	rad54b	84	50.929	Oryzias_latipes_hsok
ENSEBUG00000009104	rad54b	82	50.771	ENSOMEG00000004345	rad54b	99	50.771	Oryzias_melastigma
ENSEBUG00000009104	rad54b	98	46.318	ENSOGAG00000007854	-	99	45.891	Otolemur_garnettii
ENSEBUG00000009104	rad54b	86	49.265	ENSOARG00000007691	-	99	49.265	Ovis_aries
ENSEBUG00000009104	rad54b	99	45.668	ENSPPAG00000029572	-	99	45.590	Pan_paniscus
ENSEBUG00000009104	rad54b	98	46.939	ENSPPRG00000007571	-	99	50.340	Panthera_pardus
ENSEBUG00000009104	rad54b	77	50.612	ENSPTIG00000012670	-	99	50.612	Panthera_tigris_altaica
ENSEBUG00000009104	rad54b	99	46.738	ENSPTRG00000020427	-	100	49.328	Pan_troglodytes
ENSEBUG00000009104	rad54b	99	46.559	ENSPANG00000019566	-	99	45.940	Papio_anubis
ENSEBUG00000009104	rad54b	99	48.514	ENSPKIG00000014974	rad54b	99	48.932	Paramormyrops_kingsleyae
ENSEBUG00000009104	rad54b	98	46.195	ENSPSIG00000002383	-	99	46.055	Pelodiscus_sinensis
ENSEBUG00000009104	rad54b	99	45.793	ENSPEMG00000012133	Rad54b	99	45.793	Peromyscus_maniculatus_bairdii
ENSEBUG00000009104	rad54b	85	55.665	ENSPMAG00000002916	rad54b	99	55.788	Petromyzon_marinus
ENSEBUG00000009104	rad54b	84	50.508	ENSPCIG00000020151	-	92	50.508	Phascolarctos_cinereus
ENSEBUG00000009104	rad54b	99	47.144	ENSPFOG00000023411	rad54b	100	47.144	Poecilia_formosa
ENSEBUG00000009104	rad54b	99	47.248	ENSPLAG00000010430	rad54b	100	47.248	Poecilia_latipinna
ENSEBUG00000009104	rad54b	99	47.138	ENSPMEG00000016873	rad54b	100	47.138	Poecilia_mexicana
ENSEBUG00000009104	rad54b	99	46.618	ENSPREG00000018443	rad54b	100	46.833	Poecilia_reticulata
ENSEBUG00000009104	rad54b	99	46.815	ENSPPYG00000018750	-	99	47.097	Pongo_abelii
ENSEBUG00000009104	rad54b	99	47.609	ENSPCOG00000026845	-	100	50.744	Propithecus_coquereli
ENSEBUG00000009104	rad54b	79	49.867	ENSPVAG00000000261	-	85	49.867	Pteropus_vampyrus
ENSEBUG00000009104	rad54b	84	51.694	ENSPNYG00000018303	rad54b	96	51.690	Pundamilia_nyererei
ENSEBUG00000009104	rad54b	98	47.831	ENSPNAG00000000295	rad54b	99	47.979	Pygocentrus_nattereri
ENSEBUG00000009104	rad54b	99	46.811	ENSRNOG00000039949	Rad54b	99	46.811	Rattus_norvegicus
ENSEBUG00000009104	rad54b	99	46.360	ENSRBIG00000020419	-	99	46.386	Rhinopithecus_bieti
ENSEBUG00000009104	rad54b	99	46.360	ENSRROG00000039897	-	99	46.386	Rhinopithecus_roxellana
ENSEBUG00000009104	rad54b	62	36.741	YBR073W	RDH54	61	36.741	Saccharomyces_cerevisiae
ENSEBUG00000009104	rad54b	98	46.235	ENSSBOG00000028501	-	99	46.235	Saimiri_boliviensis_boliviensis
ENSEBUG00000009104	rad54b	99	45.949	ENSSHAG00000017038	-	99	46.055	Sarcophilus_harrisii
ENSEBUG00000009104	rad54b	64	57.785	ENSSFOG00015008483	rad54b	89	57.785	Scleropages_formosus
ENSEBUG00000009104	rad54b	98	45.585	ENSSMAG00000018659	rad54b	99	46.509	Scophthalmus_maximus
ENSEBUG00000009104	rad54b	96	47.065	ENSSDUG00000001122	rad54b	96	47.059	Seriola_dumerili
ENSEBUG00000009104	rad54b	98	46.757	ENSSLDG00000013787	rad54b	99	46.597	Seriola_lalandi_dorsalis
ENSEBUG00000009104	rad54b	98	46.609	ENSSPUG00000016497	-	99	46.609	Sphenodon_punctatus
ENSEBUG00000009104	rad54b	98	47.414	ENSSPAG00000012800	rad54b	99	47.414	Stegastes_partitus
ENSEBUG00000009104	rad54b	98	46.638	ENSSSCG00000006101	-	99	49.565	Sus_scrofa
ENSEBUG00000009104	rad54b	98	46.378	ENSTGUG00000011880	-	99	46.386	Taeniopygia_guttata
ENSEBUG00000009104	rad54b	84	52.207	ENSTRUG00000010015	rad54b	99	47.152	Takifugu_rubripes
ENSEBUG00000009104	rad54b	98	43.120	ENSTTRG00000006312	-	99	42.965	Tursiops_truncatus
ENSEBUG00000009104	rad54b	98	47.228	ENSUMAG00000016401	-	99	47.430	Ursus_maritimus
ENSEBUG00000009104	rad54b	98	46.071	ENSVPAG00000003157	-	99	46.254	Vicugna_pacos
ENSEBUG00000009104	rad54b	87	47.953	ENSXETG00000025924	rad54b	99	44.390	Xenopus_tropicalis
ENSEBUG00000009104	rad54b	99	46.774	ENSXMAG00000013141	rad54b	100	46.774	Xiphophorus_maculatus