EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000009127 (Gene tree)
Gene ID: -
Gene Symbol: rbm18
Alias: -
Full Name: RNA binding motif protein 18
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 33589 bases
Position: chrFYBX02010502.1:304879-338467
Accession: ZDB-GENE-040426-1764
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000014486	RRM_1	PF00076.22	4.8e-12	1	1
ENSEBUP00000014504	RRM_1	PF00076.22	4.9e-12	1	1
ENSEBUP00000014470	RRM_1	PF00076.22	6.3e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000015046	-	4612	-	ENSEBUP00000014470	194 (aa)	-	-
ENSEBUT00000015062	-	992	-	ENSEBUP00000014486	177 (aa)	-	-
ENSEBUT00000015080	-	998	-	ENSEBUP00000014504	179 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000009127's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000009127's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000009127	rbm18	95	56.383	ENSG00000119446	RBM18	92	58.101	Homo_sapiens
ENSEBUG00000009127	rbm18	87	54.386	ENSAPOG00000001987	rbm18	85	54.386	Acanthochromis_polyacanthus
ENSEBUG00000009127	rbm18	95	56.915	ENSAMEG00000000772	RBM18	92	58.659	Ailuropoda_melanoleuca
ENSEBUG00000009127	rbm18	86	50.556	ENSACIG00000005001	rbm18	83	55.488	Amphilophus_citrinellus
ENSEBUG00000009127	rbm18	87	54.386	ENSAOCG00000006762	rbm18	84	54.386	Amphiprion_ocellaris
ENSEBUG00000009127	rbm18	87	54.386	ENSAPEG00000007972	rbm18	86	54.386	Amphiprion_percula
ENSEBUG00000009127	rbm18	87	56.140	ENSATEG00000019164	rbm18	84	56.471	Anabas_testudineus
ENSEBUG00000009127	rbm18	95	56.383	ENSANAG00000035441	RBM18	92	58.101	Aotus_nancymaae
ENSEBUG00000009127	rbm18	87	54.386	ENSACLG00000019848	rbm18	85	54.386	Astatotilapia_calliptera
ENSEBUG00000009127	rbm18	87	58.929	ENSAMXG00000035574	rbm18	87	58.929	Astyanax_mexicanus
ENSEBUG00000009127	rbm18	95	57.447	ENSBTAG00000016367	RBM18	92	59.218	Bos_taurus
ENSEBUG00000009127	rbm18	95	56.383	ENSCJAG00000046355	RBM18	92	58.101	Callithrix_jacchus
ENSEBUG00000009127	rbm18	95	56.915	ENSCAFG00000030041	RBM18	92	58.659	Canis_familiaris
ENSEBUG00000009127	rbm18	95	56.915	ENSCAFG00020015174	RBM18	92	58.659	Canis_lupus_dingo
ENSEBUG00000009127	rbm18	95	57.447	ENSCHIG00000026444	RBM18	92	59.218	Capra_hircus
ENSEBUG00000009127	rbm18	95	56.383	ENSTSYG00000030353	RBM18	92	58.101	Carlito_syrichta
ENSEBUG00000009127	rbm18	95	56.383	ENSCPOG00000038004	RBM18	92	58.101	Cavia_porcellus
ENSEBUG00000009127	rbm18	95	56.383	ENSCCAG00000035467	RBM18	92	58.101	Cebus_capucinus
ENSEBUG00000009127	rbm18	95	56.383	ENSCATG00000035634	RBM18	92	58.101	Cercocebus_atys
ENSEBUG00000009127	rbm18	95	56.383	ENSCLAG00000010773	RBM18	92	58.101	Chinchilla_lanigera
ENSEBUG00000009127	rbm18	73	63.077	ENSCSAG00000013373	RBM18	88	63.077	Chlorocebus_sabaeus
ENSEBUG00000009127	rbm18	77	57.516	ENSCHOG00000001341	RBM18	92	59.722	Choloepus_hoffmanni
ENSEBUG00000009127	rbm18	84	61.350	ENSCPBG00000009885	RBM18	83	61.350	Chrysemys_picta_bellii
ENSEBUG00000009127	rbm18	74	40.972	ENSCING00000010157	-	73	40.278	Ciona_intestinalis
ENSEBUG00000009127	rbm18	68	37.121	ENSCSAVG00000000409	-	81	39.252	Ciona_savignyi
ENSEBUG00000009127	rbm18	95	56.383	ENSCANG00000029590	RBM18	92	58.101	Colobus_angolensis_palliatus
ENSEBUG00000009127	rbm18	95	56.383	ENSCGRG00001014593	Rbm18	92	58.101	Cricetulus_griseus_chok1gshd
ENSEBUG00000009127	rbm18	84	58.182	ENSCGRG00000012247	Rbm18	86	60.256	Cricetulus_griseus_crigri
ENSEBUG00000009127	rbm18	81	59.627	ENSCSEG00000017587	rbm18	80	59.627	Cynoglossus_semilaevis
ENSEBUG00000009127	rbm18	87	54.971	ENSCVAG00000012436	rbm18	73	55.294	Cyprinodon_variegatus
ENSEBUG00000009127	rbm18	78	60.526	ENSDARG00000044255	rbm18	77	70.408	Danio_rerio
ENSEBUG00000009127	rbm18	95	56.383	ENSDNOG00000031658	RBM18	92	58.101	Dasypus_novemcinctus
ENSEBUG00000009127	rbm18	95	56.383	ENSDORG00000028540	Rbm18	92	58.101	Dipodomys_ordii
ENSEBUG00000009127	rbm18	80	32.468	FBgn0030571	CG14414	76	33.728	Drosophila_melanogaster
ENSEBUG00000009127	rbm18	95	50.794	ENSETEG00000009832	RBM18	93	51.955	Echinops_telfairi
ENSEBUG00000009127	rbm18	95	56.915	ENSEASG00005021084	RBM18	92	58.659	Equus_asinus_asinus
ENSEBUG00000009127	rbm18	95	56.915	ENSECAG00000024639	RBM18	92	58.659	Equus_caballus
ENSEBUG00000009127	rbm18	95	45.213	ENSEEUG00000002828	RBM18	92	46.369	Erinaceus_europaeus
ENSEBUG00000009127	rbm18	79	58.824	ENSELUG00000005876	rbm18	87	56.213	Esox_lucius
ENSEBUG00000009127	rbm18	95	56.915	ENSFCAG00000037774	RBM18	92	58.659	Felis_catus
ENSEBUG00000009127	rbm18	77	59.477	ENSFALG00000001940	RBM18	88	61.806	Ficedula_albicollis
ENSEBUG00000009127	rbm18	95	56.383	ENSFDAG00000012679	RBM18	92	58.101	Fukomys_damarensis
ENSEBUG00000009127	rbm18	86	54.706	ENSFHEG00000012457	rbm18	85	54.706	Fundulus_heteroclitus
ENSEBUG00000009127	rbm18	92	54.497	ENSGMOG00000019735	rbm18	81	58.896	Gadus_morhua
ENSEBUG00000009127	rbm18	98	58.549	ENSGALG00000028167	RBM18	94	60.326	Gallus_gallus
ENSEBUG00000009127	rbm18	86	55.294	ENSGAFG00000007767	rbm18	84	55.294	Gambusia_affinis
ENSEBUG00000009127	rbm18	87	52.601	ENSGACG00000017348	rbm18	86	52.601	Gasterosteus_aculeatus
ENSEBUG00000009127	rbm18	92	57.923	ENSGAGG00000018318	RBM18	91	58.427	Gopherus_agassizii
ENSEBUG00000009127	rbm18	95	56.383	ENSGGOG00000011052	RBM18	92	58.101	Gorilla_gorilla
ENSEBUG00000009127	rbm18	87	54.386	ENSHBUG00000015237	rbm18	85	54.386	Haplochromis_burtoni
ENSEBUG00000009127	rbm18	95	56.383	ENSHGLG00000011073	RBM18	92	58.101	Heterocephalus_glaber_female
ENSEBUG00000009127	rbm18	81	50.311	ENSHGLG00100006247	-	84	52.740	Heterocephalus_glaber_male
ENSEBUG00000009127	rbm18	95	56.383	ENSHGLG00100005536	RBM18	92	58.101	Heterocephalus_glaber_male
ENSEBUG00000009127	rbm18	89	54.023	ENSHCOG00000003148	rbm18	88	54.023	Hippocampus_comes
ENSEBUG00000009127	rbm18	90	57.143	ENSIPUG00000021512	rbm18	72	58.929	Ictalurus_punctatus
ENSEBUG00000009127	rbm18	95	56.383	ENSSTOG00000022388	-	92	58.101	Ictidomys_tridecemlineatus
ENSEBUG00000009127	rbm18	84	55.828	ENSSTOG00000032266	-	87	55.828	Ictidomys_tridecemlineatus
ENSEBUG00000009127	rbm18	95	53.723	ENSJJAG00000010974	-	92	55.307	Jaculus_jaculus
ENSEBUG00000009127	rbm18	73	63.077	ENSJJAG00000009581	-	80	63.077	Jaculus_jaculus
ENSEBUG00000009127	rbm18	87	54.971	ENSKMAG00000010679	rbm18	73	54.971	Kryptolebias_marmoratus
ENSEBUG00000009127	rbm18	87	54.386	ENSLBEG00000023896	rbm18	84	55.294	Labrus_bergylta
ENSEBUG00000009127	rbm18	76	64.179	ENSLACG00000009920	RBM18	96	64.179	Latimeria_chalumnae
ENSEBUG00000009127	rbm18	95	56.383	ENSLAFG00000012134	RBM18	93	58.101	Loxodonta_africana
ENSEBUG00000009127	rbm18	95	56.383	ENSMFAG00000000443	RBM18	92	58.101	Macaca_fascicularis
ENSEBUG00000009127	rbm18	95	56.383	ENSMMUG00000011455	RBM18	92	58.101	Macaca_mulatta
ENSEBUG00000009127	rbm18	95	56.383	ENSMNEG00000035374	RBM18	92	58.101	Macaca_nemestrina
ENSEBUG00000009127	rbm18	95	56.383	ENSMLEG00000043105	RBM18	92	58.101	Mandrillus_leucophaeus
ENSEBUG00000009127	rbm18	87	55.556	ENSMAMG00000009239	rbm18	84	55.556	Mastacembelus_armatus
ENSEBUG00000009127	rbm18	87	54.386	ENSMZEG00005017921	rbm18	85	54.386	Maylandia_zebra
ENSEBUG00000009127	rbm18	90	54.749	ENSMGAG00000016888	RBM18	93	56.471	Meleagris_gallopavo
ENSEBUG00000009127	rbm18	95	56.383	ENSMAUG00000021365	Rbm18	92	58.101	Mesocricetus_auratus
ENSEBUG00000009127	rbm18	95	56.383	ENSMICG00000046793	RBM18	92	58.101	Microcebus_murinus
ENSEBUG00000009127	rbm18	95	56.383	ENSMOCG00000000613	Rbm18	92	58.101	Microtus_ochrogaster
ENSEBUG00000009127	rbm18	78	54.605	ENSMMOG00000021319	rbm18	77	54.605	Mola_mola
ENSEBUG00000009127	rbm18	77	58.170	ENSMODG00000019688	RBM18	93	60.417	Monodelphis_domestica
ENSEBUG00000009127	rbm18	87	55.556	ENSMALG00000017766	rbm18	85	55.556	Monopterus_albus
ENSEBUG00000009127	rbm18	95	56.383	MGP_CAROLIEiJ_G0023488	Rbm18	92	58.101	Mus_caroli
ENSEBUG00000009127	rbm18	95	56.383	ENSMUSG00000026889	Rbm18	92	58.101	Mus_musculus
ENSEBUG00000009127	rbm18	95	55.851	MGP_PahariEiJ_G0024945	Rbm18	88	59.172	Mus_pahari
ENSEBUG00000009127	rbm18	95	56.383	MGP_SPRETEiJ_G0024405	Rbm18	92	58.101	Mus_spretus
ENSEBUG00000009127	rbm18	95	56.915	ENSMPUG00000007246	RBM18	92	58.659	Mustela_putorius_furo
ENSEBUG00000009127	rbm18	95	56.915	ENSMLUG00000013224	-	92	58.659	Myotis_lucifugus
ENSEBUG00000009127	rbm18	95	56.915	ENSMLUG00000004794	-	92	58.659	Myotis_lucifugus
ENSEBUG00000009127	rbm18	95	56.383	ENSNGAG00000000041	Rbm18	92	58.101	Nannospalax_galili
ENSEBUG00000009127	rbm18	87	54.386	ENSNBRG00000021128	rbm18	85	54.386	Neolamprologus_brichardi
ENSEBUG00000009127	rbm18	95	56.383	ENSNLEG00000017174	RBM18	92	58.101	Nomascus_leucogenys
ENSEBUG00000009127	rbm18	95	45.213	ENSMEUG00000015704	RBM18	94	46.369	Notamacropus_eugenii
ENSEBUG00000009127	rbm18	95	56.383	ENSOPRG00000010381	RBM18	92	58.101	Ochotona_princeps
ENSEBUG00000009127	rbm18	95	56.383	ENSODEG00000002055	RBM18	92	58.101	Octodon_degus
ENSEBUG00000009127	rbm18	87	54.386	ENSONIG00000003723	rbm18	85	54.386	Oreochromis_niloticus
ENSEBUG00000009127	rbm18	93	57.065	ENSOANG00000008200	RBM18	90	58.857	Ornithorhynchus_anatinus
ENSEBUG00000009127	rbm18	95	56.915	ENSOCUG00000008527	RBM18	92	58.659	Oryctolagus_cuniculus
ENSEBUG00000009127	rbm18	78	56.209	ENSORLG00000009962	rbm18	77	59.355	Oryzias_latipes
ENSEBUG00000009127	rbm18	81	56.051	ENSORLG00020013452	rbm18	77	59.355	Oryzias_latipes_hni
ENSEBUG00000009127	rbm18	78	55.484	ENSORLG00015001711	rbm18	79	57.500	Oryzias_latipes_hsok
ENSEBUG00000009127	rbm18	78	56.209	ENSOMEG00000001492	rbm18	77	59.355	Oryzias_melastigma
ENSEBUG00000009127	rbm18	95	56.383	ENSOGAG00000015104	RBM18	92	58.101	Otolemur_garnettii
ENSEBUG00000009127	rbm18	95	57.447	ENSOARG00000014228	RBM18	92	59.218	Ovis_aries
ENSEBUG00000009127	rbm18	95	56.383	ENSPPAG00000023355	RBM18	92	58.101	Pan_paniscus
ENSEBUG00000009127	rbm18	95	56.915	ENSPPRG00000011360	RBM18	92	58.659	Panthera_pardus
ENSEBUG00000009127	rbm18	95	56.915	ENSPTIG00000007126	RBM18	92	58.659	Panthera_tigris_altaica
ENSEBUG00000009127	rbm18	95	56.383	ENSPTRG00000021323	RBM18	92	58.101	Pan_troglodytes
ENSEBUG00000009127	rbm18	95	56.383	ENSPANG00000025845	RBM18	92	58.101	Papio_anubis
ENSEBUG00000009127	rbm18	72	61.417	ENSPKIG00000005430	rbm18	75	59.398	Paramormyrops_kingsleyae
ENSEBUG00000009127	rbm18	93	58.378	ENSPSIG00000013631	RBM18	90	60.345	Pelodiscus_sinensis
ENSEBUG00000009127	rbm18	78	60.645	ENSPMGG00000023951	rbm18	77	60.645	Periophthalmus_magnuspinnatus
ENSEBUG00000009127	rbm18	85	55.152	ENSPMAG00000000630	rbm18	97	55.152	Petromyzon_marinus
ENSEBUG00000009127	rbm18	95	56.915	ENSPCIG00000025526	RBM18	93	58.659	Phascolarctos_cinereus
ENSEBUG00000009127	rbm18	86	55.294	ENSPFOG00000019706	rbm18	84	55.294	Poecilia_formosa
ENSEBUG00000009127	rbm18	86	55.294	ENSPLAG00000005571	rbm18	84	55.294	Poecilia_latipinna
ENSEBUG00000009127	rbm18	86	55.294	ENSPMEG00000013977	rbm18	84	55.294	Poecilia_mexicana
ENSEBUG00000009127	rbm18	86	55.294	ENSPREG00000009157	rbm18	84	55.294	Poecilia_reticulata
ENSEBUG00000009127	rbm18	95	56.383	ENSPPYG00000019569	RBM18	92	58.101	Pongo_abelii
ENSEBUG00000009127	rbm18	73	63.077	ENSPCAG00000011245	RBM18	94	63.077	Procavia_capensis
ENSEBUG00000009127	rbm18	95	56.383	ENSPCOG00000024474	RBM18	92	58.101	Propithecus_coquereli
ENSEBUG00000009127	rbm18	95	56.915	ENSPVAG00000000863	RBM18	92	58.659	Pteropus_vampyrus
ENSEBUG00000009127	rbm18	87	54.386	ENSPNYG00000012421	rbm18	85	54.386	Pundamilia_nyererei
ENSEBUG00000009127	rbm18	90	57.471	ENSPNAG00000017660	rbm18	87	58.929	Pygocentrus_nattereri
ENSEBUG00000009127	rbm18	95	56.383	ENSRNOG00000006763	Rbm18	92	58.101	Rattus_norvegicus
ENSEBUG00000009127	rbm18	95	56.383	ENSRBIG00000040177	RBM18	92	58.101	Rhinopithecus_bieti
ENSEBUG00000009127	rbm18	95	56.383	ENSRROG00000031364	RBM18	92	58.101	Rhinopithecus_roxellana
ENSEBUG00000009127	rbm18	95	56.383	ENSSBOG00000024806	RBM18	92	58.101	Saimiri_boliviensis_boliviensis
ENSEBUG00000009127	rbm18	95	56.915	ENSSHAG00000012257	RBM18	93	58.659	Sarcophilus_harrisii
ENSEBUG00000009127	rbm18	79	58.442	ENSSFOG00015001100	rbm18	83	57.595	Scleropages_formosus
ENSEBUG00000009127	rbm18	80	55.901	ENSSMAG00000020138	rbm18	80	56.250	Scophthalmus_maximus
ENSEBUG00000009127	rbm18	87	55.556	ENSSDUG00000016203	rbm18	82	55.882	Seriola_dumerili
ENSEBUG00000009127	rbm18	87	55.556	ENSSLDG00000016329	rbm18	84	55.882	Seriola_lalandi_dorsalis
ENSEBUG00000009127	rbm18	77	58.442	ENSSPUG00000001601	RBM18	80	60.839	Sphenodon_punctatus
ENSEBUG00000009127	rbm18	87	54.386	ENSSPAG00000005394	rbm18	84	54.386	Stegastes_partitus
ENSEBUG00000009127	rbm18	95	56.915	ENSSSCG00000030089	RBM18	92	58.659	Sus_scrofa
ENSEBUG00000009127	rbm18	77	59.477	ENSTGUG00000006802	RBM18	94	60.959	Taeniopygia_guttata
ENSEBUG00000009127	rbm18	78	58.065	ENSTRUG00000005812	rbm18	77	58.065	Takifugu_rubripes
ENSEBUG00000009127	rbm18	78	58.065	ENSTNIG00000009141	rbm18	87	54.651	Tetraodon_nigroviridis
ENSEBUG00000009127	rbm18	77	57.516	ENSTBEG00000016520	RBM18	92	59.722	Tupaia_belangeri
ENSEBUG00000009127	rbm18	95	56.915	ENSUAMG00000014431	RBM18	92	58.659	Ursus_americanus
ENSEBUG00000009127	rbm18	95	56.915	ENSUMAG00000003445	RBM18	92	58.659	Ursus_maritimus
ENSEBUG00000009127	rbm18	95	56.915	ENSVPAG00000008618	RBM18	92	58.659	Vicugna_pacos
ENSEBUG00000009127	rbm18	95	56.915	ENSVVUG00000009442	RBM18	92	58.659	Vulpes_vulpes
ENSEBUG00000009127	rbm18	79	60.131	ENSXETG00000016328	rbm18	79	60.131	Xenopus_tropicalis
ENSEBUG00000009127	rbm18	86	55.294	ENSXMAG00000003538	rbm18	84	55.294	Xiphophorus_maculatus