EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSEBUG00000009317 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 62791 bases
Position: chrFYBX02009896.1:1318706-1381496
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000014788	zf-C2H2	PF00096.26	5.3e-25	1	5
ENSEBUP00000014788	zf-C2H2	PF00096.26	5.3e-25	2	5
ENSEBUP00000014788	zf-C2H2	PF00096.26	5.3e-25	3	5
ENSEBUP00000014788	zf-C2H2	PF00096.26	5.3e-25	4	5
ENSEBUP00000014788	zf-C2H2	PF00096.26	5.3e-25	5	5
ENSEBUP00000014788	zf-met	PF12874.7	3.2e-10	1	2
ENSEBUP00000014788	zf-met	PF12874.7	3.2e-10	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000015364	-	3345	-	ENSEBUP00000014788	331 (aa)	-	-
ENSEBUT00000015358	-	1997	-	ENSEBUP00000014781	530 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000009317's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000009317's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000009317	-	63	46.635	ENSEBUG00000003078	-	71	46.635
ENSEBUG00000009317	-	59	39.007	ENSEBUG00000005099	-	58	39.007
ENSEBUG00000009317	-	86	38.095	ENSEBUG00000005200	-	63	38.095
ENSEBUG00000009317	-	97	50.467	ENSEBUG00000003128	-	93	50.467
ENSEBUG00000009317	-	97	79.193	ENSEBUG00000016387	-	80	79.193
ENSEBUG00000009317	-	60	39.594	ENSEBUG00000012939	-	67	39.594
ENSEBUG00000009317	-	100	51.009	ENSEBUG00000008185	-	99	51.873
ENSEBUG00000009317	-	98	45.968	ENSEBUG00000007518	-	98	45.699
ENSEBUG00000009317	-	99	46.828	ENSEBUG00000009484	-	84	46.828
ENSEBUG00000009317	-	96	43.077	ENSEBUG00000002586	-	85	43.077
ENSEBUG00000009317	-	99	47.511	ENSEBUG00000016362	-	100	49.746
ENSEBUG00000009317	-	98	53.172	ENSEBUG00000002032	-	97	54.079
ENSEBUG00000009317	-	96	40.741	ENSEBUG00000015993	-	83	40.741
ENSEBUG00000009317	-	80	48.344	ENSEBUG00000005310	ZNF226	95	50.549
ENSEBUG00000009317	-	62	47.826	ENSEBUG00000005816	-	54	46.324
ENSEBUG00000009317	-	61	48.322	ENSEBUG00000006847	-	76	48.322
ENSEBUG00000009317	-	98	57.012	ENSEBUG00000008025	-	98	57.012
ENSEBUG00000009317	-	63	43.716	ENSEBUG00000008903	-	63	45.390
ENSEBUG00000009317	-	76	42.932	ENSEBUG00000016090	-	88	36.842
ENSEBUG00000009317	-	60	50.993	ENSEBUG00000013400	-	57	50.993
ENSEBUG00000009317	-	61	43.396	ENSEBUG00000011977	-	64	43.396
ENSEBUG00000009317	-	98	46.734	ENSEBUG00000012704	-	99	48.328
ENSEBUG00000009317	-	59	43.655	ENSEBUG00000014042	-	69	43.655
ENSEBUG00000009317	-	69	39.130	ENSEBUG00000012053	-	84	39.130
ENSEBUG00000009317	-	75	36.765	ENSEBUG00000003842	-	88	38.132
ENSEBUG00000009317	-	79	30.961	ENSEBUG00000005854	-	92	30.496
ENSEBUG00000009317	-	60	50.000	ENSEBUG00000014677	-	76	50.000
ENSEBUG00000009317	-	95	39.648	ENSEBUG00000016292	-	92	39.648
ENSEBUG00000009317	-	100	54.167	ENSEBUG00000014667	-	100	56.627
ENSEBUG00000009317	-	85	35.764	ENSEBUG00000014665	-	98	35.764
ENSEBUG00000009317	-	63	46.667	ENSEBUG00000004597	-	73	46.667
ENSEBUG00000009317	-	62	47.826	ENSEBUG00000012775	-	66	47.826
ENSEBUG00000009317	-	60	44.706	ENSEBUG00000014730	-	55	44.706
ENSEBUG00000009317	-	68	40.708	ENSEBUG00000015159	-	90	40.708
ENSEBUG00000009317	-	96	52.469	ENSEBUG00000016496	-	88	54.321
ENSEBUG00000009317	-	68	41.935	ENSEBUG00000009436	-	93	41.935
ENSEBUG00000009317	-	98	53.067	ENSEBUG00000003555	-	99	53.067
ENSEBUG00000009317	-	62	47.917	ENSEBUG00000011435	-	63	47.917