EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000009437 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 86637 bases
Position: chrFYBX02000162.1:1110175-1196811
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000014971	SRP54	PF00448.22	4.5e-76	1	1
ENSEBUP00000014999	SRP54	PF00448.22	4.5e-76	1	1
ENSEBUP00000014971	SRP54_N	PF02881.19	2.3e-18	1	1
ENSEBUP00000014999	SRP54_N	PF02881.19	2.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000015547	-	2365	-	ENSEBUP00000014971	504 (aa)	-	-
ENSEBUT00000015575	-	6449	-	ENSEBUP00000014999	504 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000009437's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000009437's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000009437	-	100	87.500	ENSG00000100883	SRP54	100	90.698	Homo_sapiens
ENSEBUG00000009437	-	100	88.492	ENSAPOG00000011314	srp54	100	88.492	Acanthochromis_polyacanthus
ENSEBUG00000009437	-	100	87.500	ENSAMEG00000015544	SRP54	100	87.500	Ailuropoda_melanoleuca
ENSEBUG00000009437	-	89	90.423	ENSACIG00000022831	srp54	97	90.423	Amphilophus_citrinellus
ENSEBUG00000009437	-	100	88.492	ENSAOCG00000019401	srp54	100	88.492	Amphiprion_ocellaris
ENSEBUG00000009437	-	100	88.492	ENSAPEG00000001977	srp54	100	88.492	Amphiprion_percula
ENSEBUG00000009437	-	100	88.690	ENSATEG00000013877	srp54	100	88.690	Anabas_testudineus
ENSEBUG00000009437	-	94	88.819	ENSAPLG00000010125	SRP54	95	88.819	Anas_platyrhynchos
ENSEBUG00000009437	-	100	87.103	ENSACAG00000002103	-	100	87.103	Anolis_carolinensis
ENSEBUG00000009437	-	86	84.562	ENSACAG00000010631	-	100	84.562	Anolis_carolinensis
ENSEBUG00000009437	-	65	73.414	ENSACAG00000001124	-	100	73.414	Anolis_carolinensis
ENSEBUG00000009437	-	100	87.500	ENSANAG00000022133	SRP54	100	87.500	Aotus_nancymaae
ENSEBUG00000009437	-	100	88.690	ENSACLG00000015866	srp54	100	88.690	Astatotilapia_calliptera
ENSEBUG00000009437	-	100	88.889	ENSAMXG00000032669	SRP54	100	88.889	Astyanax_mexicanus
ENSEBUG00000009437	-	100	87.500	ENSBTAG00000019085	SRP54	100	87.500	Bos_taurus
ENSEBUG00000009437	-	96	71.779	WBGene00009012	F21D5.7	99	71.779	Caenorhabditis_elegans
ENSEBUG00000009437	-	100	87.500	ENSCJAG00000006581	SRP54	100	87.500	Callithrix_jacchus
ENSEBUG00000009437	-	100	87.500	ENSCAFG00000013331	SRP54	100	87.500	Canis_familiaris
ENSEBUG00000009437	-	100	87.500	ENSCAFG00020023427	SRP54	100	87.500	Canis_lupus_dingo
ENSEBUG00000009437	-	100	87.500	ENSCHIG00000026345	SRP54	100	87.500	Capra_hircus
ENSEBUG00000009437	-	94	78.316	ENSTSYG00000035333	-	93	78.316	Carlito_syrichta
ENSEBUG00000009437	-	100	87.302	ENSTSYG00000002680	-	100	87.302	Carlito_syrichta
ENSEBUG00000009437	-	94	56.883	ENSCAPG00000008780	SRP54	100	56.883	Cavia_aperea
ENSEBUG00000009437	-	100	87.103	ENSCPOG00000003691	SRP54	100	87.103	Cavia_porcellus
ENSEBUG00000009437	-	90	87.143	ENSCCAG00000024179	SRP54	100	87.351	Cebus_capucinus
ENSEBUG00000009437	-	100	87.500	ENSCATG00000034083	SRP54	100	87.500	Cercocebus_atys
ENSEBUG00000009437	-	100	87.500	ENSCLAG00000015076	SRP54	100	87.500	Chinchilla_lanigera
ENSEBUG00000009437	-	100	87.500	ENSCSAG00000015575	SRP54	100	87.500	Chlorocebus_sabaeus
ENSEBUG00000009437	-	95	79.002	ENSCHOG00000008986	SRP54	100	79.002	Choloepus_hoffmanni
ENSEBUG00000009437	-	100	87.698	ENSCPBG00000026195	SRP54	100	87.698	Chrysemys_picta_bellii
ENSEBUG00000009437	-	100	81.349	ENSCING00000007380	-	100	81.349	Ciona_intestinalis
ENSEBUG00000009437	-	100	87.500	ENSCANG00000028532	SRP54	100	87.500	Colobus_angolensis_palliatus
ENSEBUG00000009437	-	100	87.500	ENSCGRG00001009525	-	100	87.500	Cricetulus_griseus_chok1gshd
ENSEBUG00000009437	-	76	90.649	ENSCGRG00000009453	-	89	90.649	Cricetulus_griseus_crigri
ENSEBUG00000009437	-	100	88.095	ENSCSEG00000012392	srp54	100	88.095	Cynoglossus_semilaevis
ENSEBUG00000009437	-	100	88.294	ENSCVAG00000010395	srp54	100	88.294	Cyprinodon_variegatus
ENSEBUG00000009437	-	100	88.095	ENSDARG00000098367	srp54	100	88.095	Danio_rerio
ENSEBUG00000009437	-	100	87.500	ENSDNOG00000032525	SRP54	100	87.500	Dasypus_novemcinctus
ENSEBUG00000009437	-	90	76.159	ENSDORG00000005159	-	98	76.159	Dipodomys_ordii
ENSEBUG00000009437	-	96	78.969	FBgn0010747	Srp54k	98	78.672	Drosophila_melanogaster
ENSEBUG00000009437	-	79	50.378	ENSETEG00000012102	-	96	50.378	Echinops_telfairi
ENSEBUG00000009437	-	100	86.706	ENSETEG00000016307	-	100	86.706	Echinops_telfairi
ENSEBUG00000009437	-	100	87.500	ENSEASG00005002057	SRP54	100	87.500	Equus_asinus_asinus
ENSEBUG00000009437	-	98	88.306	ENSECAG00000018042	SRP54	98	88.306	Equus_caballus
ENSEBUG00000009437	-	100	73.016	ENSEEUG00000001511	SRP54	100	73.016	Erinaceus_europaeus
ENSEBUG00000009437	-	100	87.698	ENSELUG00000003395	srp54	100	87.698	Esox_lucius
ENSEBUG00000009437	-	100	87.698	ENSFCAG00000032033	SRP54	100	87.698	Felis_catus
ENSEBUG00000009437	-	100	87.302	ENSFALG00000005995	SRP54	100	87.302	Ficedula_albicollis
ENSEBUG00000009437	-	100	87.500	ENSFDAG00000016767	SRP54	99	88.798	Fukomys_damarensis
ENSEBUG00000009437	-	100	88.095	ENSFHEG00000004263	srp54	100	88.095	Fundulus_heteroclitus
ENSEBUG00000009437	-	95	83.473	ENSGMOG00000011391	srp54	100	83.473	Gadus_morhua
ENSEBUG00000009437	-	100	87.302	ENSGALG00000023135	SRP54	100	87.302	Gallus_gallus
ENSEBUG00000009437	-	100	88.492	ENSGAFG00000011586	srp54	100	88.492	Gambusia_affinis
ENSEBUG00000009437	-	100	88.095	ENSGACG00000004181	srp54	100	90.553	Gasterosteus_aculeatus
ENSEBUG00000009437	-	100	87.698	ENSGAGG00000014766	SRP54	100	87.698	Gopherus_agassizii
ENSEBUG00000009437	-	100	87.500	ENSGGOG00000002926	SRP54	100	87.500	Gorilla_gorilla
ENSEBUG00000009437	-	100	88.690	ENSHBUG00000005678	srp54	100	88.690	Haplochromis_burtoni
ENSEBUG00000009437	-	100	87.500	ENSHGLG00000002850	SRP54	100	87.500	Heterocephalus_glaber_female
ENSEBUG00000009437	-	100	87.500	ENSHGLG00100005263	SRP54	100	87.500	Heterocephalus_glaber_male
ENSEBUG00000009437	-	100	61.188	ENSHGLG00100007281	-	100	61.188	Heterocephalus_glaber_male
ENSEBUG00000009437	-	100	87.302	ENSHCOG00000021127	srp54	100	87.302	Hippocampus_comes
ENSEBUG00000009437	-	100	88.492	ENSIPUG00000001420	srp54	100	88.492	Ictalurus_punctatus
ENSEBUG00000009437	-	100	87.500	ENSSTOG00000016023	SRP54	100	87.500	Ictidomys_tridecemlineatus
ENSEBUG00000009437	-	87	67.500	ENSJJAG00000016404	-	100	67.500	Jaculus_jaculus
ENSEBUG00000009437	-	100	83.135	ENSJJAG00000013417	-	100	83.135	Jaculus_jaculus
ENSEBUG00000009437	-	100	88.690	ENSKMAG00000007707	srp54	100	88.690	Kryptolebias_marmoratus
ENSEBUG00000009437	-	100	88.492	ENSLBEG00000021122	srp54	100	88.492	Labrus_bergylta
ENSEBUG00000009437	-	100	88.492	ENSLBEG00000018690	srp54	100	88.492	Labrus_bergylta
ENSEBUG00000009437	-	100	88.095	ENSLACG00000017890	SRP54	100	88.095	Latimeria_chalumnae
ENSEBUG00000009437	-	100	88.889	ENSLOCG00000009440	srp54	100	88.889	Lepisosteus_oculatus
ENSEBUG00000009437	-	100	87.500	ENSLAFG00000012007	SRP54	100	87.500	Loxodonta_africana
ENSEBUG00000009437	-	100	87.500	ENSMFAG00000044371	SRP54	100	87.500	Macaca_fascicularis
ENSEBUG00000009437	-	100	87.500	ENSMMUG00000015073	FAM177A1	100	87.500	Macaca_mulatta
ENSEBUG00000009437	-	100	87.500	ENSMNEG00000006947	SRP54	100	87.500	Macaca_nemestrina
ENSEBUG00000009437	-	100	87.500	ENSMLEG00000042251	SRP54	100	87.500	Mandrillus_leucophaeus
ENSEBUG00000009437	-	100	88.690	ENSMAMG00000004803	srp54	100	88.690	Mastacembelus_armatus
ENSEBUG00000009437	-	100	88.690	ENSMZEG00005027528	srp54	100	88.690	Maylandia_zebra
ENSEBUG00000009437	-	100	83.004	ENSMGAG00000012481	SRP54	100	83.004	Meleagris_gallopavo
ENSEBUG00000009437	-	100	87.302	ENSMAUG00000014447	-	100	87.302	Mesocricetus_auratus
ENSEBUG00000009437	-	100	87.500	ENSMICG00000010270	SRP54	100	87.500	Microcebus_murinus
ENSEBUG00000009437	-	87	87.500	ENSMOCG00000000948	-	100	87.500	Microtus_ochrogaster
ENSEBUG00000009437	-	89	89.262	ENSMMOG00000020303	srp54	98	89.262	Mola_mola
ENSEBUG00000009437	-	100	87.698	ENSMODG00000012925	-	100	87.698	Monodelphis_domestica
ENSEBUG00000009437	-	100	87.698	ENSMODG00000023150	-	100	87.698	Monodelphis_domestica
ENSEBUG00000009437	-	88	91.196	ENSMALG00000009163	srp54	98	91.196	Monopterus_albus
ENSEBUG00000009437	-	100	87.302	MGP_CAROLIEiJ_G0017754	-	100	87.302	Mus_caroli
ENSEBUG00000009437	-	100	87.302	ENSMUSG00000112449	Srp54b	100	87.302	Mus_musculus
ENSEBUG00000009437	-	100	86.508	ENSMUSG00000079108	Srp54c	100	86.508	Mus_musculus
ENSEBUG00000009437	-	100	87.302	ENSMUSG00000073079	Srp54a	100	88.182	Mus_musculus
ENSEBUG00000009437	-	100	87.302	MGP_PahariEiJ_G0029510	-	100	87.302	Mus_pahari
ENSEBUG00000009437	-	100	87.500	ENSMPUG00000016302	SRP54	100	87.500	Mustela_putorius_furo
ENSEBUG00000009437	-	100	86.905	ENSMLUG00000008958	SRP54	100	86.905	Myotis_lucifugus
ENSEBUG00000009437	-	100	79.167	ENSNGAG00000019806	-	100	79.167	Nannospalax_galili
ENSEBUG00000009437	-	87	88.864	ENSNBRG00000006000	srp54	100	88.864	Neolamprologus_brichardi
ENSEBUG00000009437	-	100	87.500	ENSNLEG00000003496	SRP54	100	87.500	Nomascus_leucogenys
ENSEBUG00000009437	-	67	90.357	ENSMEUG00000000138	-	76	90.357	Notamacropus_eugenii
ENSEBUG00000009437	-	58	88.889	ENSOPRG00000014502	-	60	88.889	Ochotona_princeps
ENSEBUG00000009437	-	100	87.500	ENSODEG00000004865	SRP54	100	87.500	Octodon_degus
ENSEBUG00000009437	-	100	88.690	ENSONIG00000011768	srp54	100	88.690	Oreochromis_niloticus
ENSEBUG00000009437	-	100	87.500	ENSOANG00000014051	SRP54	100	87.500	Ornithorhynchus_anatinus
ENSEBUG00000009437	-	100	86.905	ENSOCUG00000007838	SRP54	100	86.905	Oryctolagus_cuniculus
ENSEBUG00000009437	-	100	88.492	ENSORLG00000010027	srp54	100	88.492	Oryzias_latipes
ENSEBUG00000009437	-	100	88.492	ENSORLG00020001878	srp54	100	88.492	Oryzias_latipes_hni
ENSEBUG00000009437	-	100	88.492	ENSORLG00015021866	srp54	100	88.492	Oryzias_latipes_hsok
ENSEBUG00000009437	-	100	88.690	ENSOMEG00000020952	srp54	100	88.690	Oryzias_melastigma
ENSEBUG00000009437	-	100	87.500	ENSOGAG00000012188	SRP54	100	87.500	Otolemur_garnettii
ENSEBUG00000009437	-	100	87.500	ENSOARG00000007160	SRP54	100	87.500	Ovis_aries
ENSEBUG00000009437	-	100	87.500	ENSPPAG00000017434	SRP54	100	87.500	Pan_paniscus
ENSEBUG00000009437	-	100	87.103	ENSPPRG00000014047	SRP54	100	87.103	Panthera_pardus
ENSEBUG00000009437	-	100	87.698	ENSPTIG00000000744	SRP54	96	87.698	Panthera_tigris_altaica
ENSEBUG00000009437	-	100	87.500	ENSPTRG00000006259	FAM177A1	100	87.500	Pan_troglodytes
ENSEBUG00000009437	-	100	87.500	ENSPANG00000023853	SRP54	100	87.500	Papio_anubis
ENSEBUG00000009437	-	100	88.690	ENSPKIG00000001953	srp54	100	88.690	Paramormyrops_kingsleyae
ENSEBUG00000009437	-	100	87.897	ENSPSIG00000006476	SRP54	100	87.897	Pelodiscus_sinensis
ENSEBUG00000009437	-	90	89.207	ENSPMGG00000004127	srp54	98	89.207	Periophthalmus_magnuspinnatus
ENSEBUG00000009437	-	100	76.190	ENSPEMG00000019634	-	100	76.190	Peromyscus_maniculatus_bairdii
ENSEBUG00000009437	-	100	93.056	ENSPMAG00000006078	-	100	93.056	Petromyzon_marinus
ENSEBUG00000009437	-	100	87.500	ENSPCIG00000016175	SRP54	100	87.500	Phascolarctos_cinereus
ENSEBUG00000009437	-	100	88.492	ENSPFOG00000008870	srp54	100	88.492	Poecilia_formosa
ENSEBUG00000009437	-	100	88.492	ENSPLAG00000009889	srp54	100	88.492	Poecilia_latipinna
ENSEBUG00000009437	-	100	88.492	ENSPMEG00000008601	srp54	100	88.492	Poecilia_mexicana
ENSEBUG00000009437	-	100	88.492	ENSPREG00000004505	srp54	100	88.492	Poecilia_reticulata
ENSEBUG00000009437	-	100	82.937	ENSPPYG00000005739	SRP54	100	82.937	Pongo_abelii
ENSEBUG00000009437	-	100	84.325	ENSPCAG00000006268	SRP54	100	84.325	Procavia_capensis
ENSEBUG00000009437	-	100	85.743	ENSPCOG00000022473	SRP54	100	85.743	Propithecus_coquereli
ENSEBUG00000009437	-	63	91.480	ENSPVAG00000010056	SRP54	82	91.480	Pteropus_vampyrus
ENSEBUG00000009437	-	100	88.690	ENSPNYG00000009717	srp54	100	88.690	Pundamilia_nyererei
ENSEBUG00000009437	-	100	88.690	ENSPNAG00000008544	srp54	100	88.690	Pygocentrus_nattereri
ENSEBUG00000009437	-	100	87.103	ENSRNOG00000032776	Srp54a	100	87.103	Rattus_norvegicus
ENSEBUG00000009437	-	100	87.500	ENSRROG00000041292	SRP54	100	87.500	Rhinopithecus_roxellana
ENSEBUG00000009437	-	86	51.020	YPR088C	SRP54	94	46.809	Saccharomyces_cerevisiae
ENSEBUG00000009437	-	94	87.131	ENSSBOG00000035145	SRP54	100	87.131	Saimiri_boliviensis_boliviensis
ENSEBUG00000009437	-	68	86.589	ENSSHAG00000000671	SRP54	100	86.589	Sarcophilus_harrisii
ENSEBUG00000009437	-	100	88.492	ENSSFOG00015013920	srp54	100	88.492	Scleropages_formosus
ENSEBUG00000009437	-	100	83.146	ENSSMAG00000002441	srp54	100	83.146	Scophthalmus_maximus
ENSEBUG00000009437	-	100	88.690	ENSSDUG00000018586	srp54	100	88.690	Seriola_dumerili
ENSEBUG00000009437	-	100	88.492	ENSSLDG00000010476	srp54	100	88.492	Seriola_lalandi_dorsalis
ENSEBUG00000009437	-	100	87.500	ENSSARG00000002744	SRP54	100	87.500	Sorex_araneus
ENSEBUG00000009437	-	100	87.698	ENSSPUG00000013101	SRP54	100	87.698	Sphenodon_punctatus
ENSEBUG00000009437	-	100	88.492	ENSSPAG00000002354	srp54	100	88.492	Stegastes_partitus
ENSEBUG00000009437	-	100	87.500	ENSSSCG00000001955	SRP54	100	87.500	Sus_scrofa
ENSEBUG00000009437	-	94	88.819	ENSTGUG00000011945	-	95	88.819	Taeniopygia_guttata
ENSEBUG00000009437	-	100	88.095	ENSTRUG00000007057	srp54	100	88.095	Takifugu_rubripes
ENSEBUG00000009437	-	100	87.698	ENSTNIG00000002589	srp54	100	87.698	Tetraodon_nigroviridis
ENSEBUG00000009437	-	89	79.642	ENSTBEG00000011409	SRP54	100	79.642	Tupaia_belangeri
ENSEBUG00000009437	-	100	79.167	ENSTTRG00000000928	SRP54	100	79.167	Tursiops_truncatus
ENSEBUG00000009437	-	52	88.550	ENSUAMG00000012385	SRP54	100	88.550	Ursus_americanus
ENSEBUG00000009437	-	100	87.500	ENSUMAG00000011234	SRP54	100	87.500	Ursus_maritimus
ENSEBUG00000009437	-	94	88.819	ENSVPAG00000005668	SRP54	100	88.819	Vicugna_pacos
ENSEBUG00000009437	-	100	87.500	ENSVVUG00000019962	SRP54	100	87.500	Vulpes_vulpes
ENSEBUG00000009437	-	100	74.162	ENSXETG00000012290	srp54	100	74.219	Xenopus_tropicalis
ENSEBUG00000009437	-	88	90.971	ENSXCOG00000004658	srp54	96	90.971	Xiphophorus_couchianus
ENSEBUG00000009437	-	100	88.492	ENSXMAG00000018315	srp54	100	88.492	Xiphophorus_maculatus