EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000009582 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 33765 bases
Position: chrFYBX02010115.1:1860933-1894697
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000015209	RRM_1	PF00076.22	2.8e-31	1	2
ENSEBUP00000015209	RRM_1	PF00076.22	2.8e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000015785	-	2353	-	ENSEBUP00000015209	228 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000009582's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000009582's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000009582	-	87	33.945	ENSEBUG00000001681	srsf4	62	35.294
ENSEBUG00000009582	-	71	41.860	ENSEBUG00000006229	srsf5b	64	41.860
ENSEBUG00000009582	-	52	45.161	ENSEBUG00000003129	srsf4	55	46.281

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000009582	-	78	75.543	ENSACIG00000002623	-	96	77.174	Amphilophus_citrinellus
ENSEBUG00000009582	-	82	80.952	ENSACLG00000005676	-	98	75.732	Astatotilapia_calliptera
ENSEBUG00000009582	-	96	69.710	ENSACLG00000021693	-	99	69.880	Astatotilapia_calliptera
ENSEBUG00000009582	-	92	56.250	WBGene00004700	rsp-3	90	57.082	Caenorhabditis_elegans
ENSEBUG00000009582	-	56	67.717	ENSCING00000000257	-	95	62.048	Ciona_intestinalis
ENSEBUG00000009582	-	78	72.472	ENSCING00000007375	-	89	65.899	Ciona_intestinalis
ENSEBUG00000009582	-	55	64.286	ENSCSAVG00000003567	-	95	56.970	Ciona_savignyi
ENSEBUG00000009582	-	78	69.101	ENSCSAVG00000006093	-	91	69.101	Ciona_savignyi
ENSEBUG00000009582	-	78	67.568	FBgn0283477	SF2	73	69.730	Drosophila_melanogaster
ENSEBUG00000009582	-	83	75.377	ENSFHEG00000017425	-	98	75.401	Fundulus_heteroclitus
ENSEBUG00000009582	-	78	79.558	ENSGMOG00000010606	-	97	79.558	Gadus_morhua
ENSEBUG00000009582	-	85	74.510	ENSGAFG00000000609	-	98	71.138	Gambusia_affinis
ENSEBUG00000009582	-	82	81.053	ENSGAFG00000012721	-	98	75.000	Gambusia_affinis
ENSEBUG00000009582	-	76	80.791	ENSGACG00000011094	-	95	80.791	Gasterosteus_aculeatus
ENSEBUG00000009582	-	96	69.874	ENSHBUG00000015576	-	99	69.758	Haplochromis_burtoni
ENSEBUG00000009582	-	51	62.712	ENSHBUG00000015600	-	90	62.712	Haplochromis_burtoni
ENSEBUG00000009582	-	82	74.737	ENSHCOG00000008016	-	95	66.953	Hippocampus_comes
ENSEBUG00000009582	-	82	78.125	ENSMFAG00000034223	-	88	67.097	Macaca_fascicularis
ENSEBUG00000009582	-	84	74.257	ENSMZEG00005019071	-	99	75.132	Maylandia_zebra
ENSEBUG00000009582	-	82	80.952	ENSMZEG00005007947	-	98	75.732	Maylandia_zebra
ENSEBUG00000009582	-	84	76.531	ENSMMOG00000018849	-	97	72.803	Mola_mola
ENSEBUG00000009582	-	84	78.125	ENSNBRG00000008134	-	95	75.105	Neolamprologus_brichardi
ENSEBUG00000009582	-	82	80.952	ENSNBRG00000019981	-	98	75.732	Neolamprologus_brichardi
ENSEBUG00000009582	-	69	67.925	ENSOPRG00000004745	-	95	67.925	Ochotona_princeps
ENSEBUG00000009582	-	84	73.659	ENSONIG00000004857	-	99	71.200	Oreochromis_niloticus
ENSEBUG00000009582	-	51	74.167	ENSOANG00000007320	-	85	72.263	Ornithorhynchus_anatinus
ENSEBUG00000009582	-	70	49.080	ENSOCUG00000026856	-	92	50.307	Oryctolagus_cuniculus
ENSEBUG00000009582	-	97	72.881	ENSORLG00000005314	-	96	73.171	Oryzias_latipes
ENSEBUG00000009582	-	97	72.881	ENSORLG00015015497	-	96	73.171	Oryzias_latipes_hsok
ENSEBUG00000009582	-	97	71.369	ENSOMEG00000017711	-	95	71.315	Oryzias_melastigma
ENSEBUG00000009582	-	93	68.889	ENSPLAG00000019553	-	99	73.840	Poecilia_latipinna
ENSEBUG00000009582	-	93	68.889	ENSPLAG00000019613	-	71	80.791	Poecilia_latipinna
ENSEBUG00000009582	-	85	75.248	ENSPREG00000016792	-	98	71.837	Poecilia_reticulata
ENSEBUG00000009582	-	84	74.020	ENSPNYG00000020651	-	95	71.486	Pundamilia_nyererei
ENSEBUG00000009582	-	82	80.952	ENSPNYG00000017115	-	98	75.732	Pundamilia_nyererei
ENSEBUG00000009582	-	87	81.773	ENSSFOG00015004989	-	70	81.152	Scleropages_formosus
ENSEBUG00000009582	-	82	74.879	ENSSDUG00000003887	-	96	71.825	Seriola_dumerili
ENSEBUG00000009582	-	84	77.083	ENSTRUG00000017058	-	97	74.678	Takifugu_rubripes
ENSEBUG00000009582	-	84	73.575	ENSTNIG00000009993	-	87	67.826	Tetraodon_nigroviridis
ENSEBUG00000009582	-	85	76.923	ENSXCOG00000017888	-	98	72.996	Xiphophorus_couchianus
ENSEBUG00000009582	-	93	68.889	ENSXCOG00000009643	-	99	73.840	Xiphophorus_couchianus
ENSEBUG00000009582	-	85	74.877	ENSXMAG00000010797	-	98	71.545	Xiphophorus_maculatus