EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000009697 (Gene tree)
Gene ID: -
Gene Symbol: zgc:110045
Alias: -
Full Name: zgc:110045
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 70746 bases
Position: chrFYBX02010406.1:2116337-2187082
Accession: ZDB-GENE-050706-149
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000015403	KH_1	PF00013.29	2.1e-35	1	2
ENSEBUP00000015403	KH_1	PF00013.29	2.1e-35	2	2
ENSEBUP00000015383	KH_1	PF00013.29	2.8e-35	1	2
ENSEBUP00000015383	KH_1	PF00013.29	2.8e-35	2	2
ENSEBUP00000015420	KH_1	PF00013.29	2.9e-33	1	2
ENSEBUP00000015420	KH_1	PF00013.29	2.9e-33	2	2
ENSEBUP00000015403	KH_2	PF07650.17	3.6e-11	1	1
ENSEBUP00000015420	KH_2	PF07650.17	4.4e-11	1	1
ENSEBUP00000015383	KH_2	PF07650.17	5.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000015994	-	3912	-	ENSEBUP00000015420	201 (aa)	-	-
ENSEBUT00000015959	-	4154	-	ENSEBUP00000015383	262 (aa)	-	-
ENSEBUT00000015979	-	4079	-	ENSEBUP00000015403	237 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000009697's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000009697's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000009697	zgc:110045	99	73.171	ENSEBUG00000007485	-	95	72.489
ENSEBUG00000009697	zgc:110045	72	32.847	ENSEBUG00000016143	fubp1	58	30.457
ENSEBUG00000009697	zgc:110045	67	34.756	ENSEBUG00000005932	-	75	34.756
ENSEBUG00000009697	zgc:110045	76	33.529	ENSEBUG00000012405	NOVA2	50	43.860
ENSEBUG00000009697	zgc:110045	90	69.613	ENSEBUG00000005495	pcbp3	60	68.159
ENSEBUG00000009697	zgc:110045	73	39.716	ENSEBUG00000012796	IGF2BP3	73	36.095
ENSEBUG00000009697	zgc:110045	81	68.293	ENSEBUG00000016192	pcbp3	81	68.293

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000009697	zgc:110045	99	76.382	ENSG00000183570	PCBP3	91	75.377	Homo_sapiens
ENSEBUG00000009697	zgc:110045	99	67.606	ENSAPOG00000023735	zgc:110045	72	67.373	Acanthochromis_polyacanthus
ENSEBUG00000009697	zgc:110045	87	74.860	ENSACIG00000002577	zgc:110045	93	71.845	Amphilophus_citrinellus
ENSEBUG00000009697	zgc:110045	79	79.874	ENSAOCG00000005266	zgc:110045	84	76.667	Amphiprion_ocellaris
ENSEBUG00000009697	zgc:110045	99	67.136	ENSAPEG00000000729	zgc:110045	54	66.949	Amphiprion_percula
ENSEBUG00000009697	zgc:110045	64	83.158	ENSATEG00000011191	zgc:110045	61	83.158	Anabas_testudineus
ENSEBUG00000009697	zgc:110045	99	67.606	ENSACLG00000019285	zgc:110045	54	67.373	Astatotilapia_calliptera
ENSEBUG00000009697	zgc:110045	99	76.382	ENSBTAG00000030775	PCBP3	89	71.366	Bos_taurus
ENSEBUG00000009697	zgc:110045	99	76.382	ENSCAFG00000011907	PCBP3	85	75.336	Canis_familiaris
ENSEBUG00000009697	zgc:110045	96	76.166	ENSCHIG00000015841	PCBP3	87	70.638	Capra_hircus
ENSEBUG00000009697	zgc:110045	87	71.212	ENSTSYG00000005254	PCBP3	89	68.722	Carlito_syrichta
ENSEBUG00000009697	zgc:110045	69	72.263	ENSCAPG00000006767	PCBP3	57	72.263	Cavia_aperea
ENSEBUG00000009697	zgc:110045	99	76.382	ENSCPOG00000003648	PCBP3	88	72.574	Cavia_porcellus
ENSEBUG00000009697	zgc:110045	99	76.382	ENSCCAG00000024561	PCBP3	91	73.762	Cebus_capucinus
ENSEBUG00000009697	zgc:110045	99	76.382	ENSCATG00000038419	PCBP3	87	73.991	Cercocebus_atys
ENSEBUG00000009697	zgc:110045	99	76.382	ENSCLAG00000006667	PCBP3	88	73.391	Chinchilla_lanigera
ENSEBUG00000009697	zgc:110045	99	76.382	ENSCANG00000026757	PCBP3	91	73.762	Colobus_angolensis_palliatus
ENSEBUG00000009697	zgc:110045	99	76.382	ENSCGRG00001006836	Pcbp3	85	75.336	Cricetulus_griseus_chok1gshd
ENSEBUG00000009697	zgc:110045	99	76.382	ENSCGRG00000001837	Pcbp3	85	75.336	Cricetulus_griseus_crigri
ENSEBUG00000009697	zgc:110045	99	70.388	ENSCSEG00000010020	zgc:110045	95	70.982	Cynoglossus_semilaevis
ENSEBUG00000009697	zgc:110045	79	79.245	ENSCVAG00000004726	zgc:110045	79	77.714	Cyprinodon_variegatus
ENSEBUG00000009697	zgc:110045	91	73.262	ENSDARG00000057141	zgc:110045	94	72.381	Danio_rerio
ENSEBUG00000009697	zgc:110045	99	76.382	ENSDNOG00000049518	PCBP3	83	76.382	Dasypus_novemcinctus
ENSEBUG00000009697	zgc:110045	97	69.266	ENSDORG00000003640	Pcbp3	100	67.742	Dipodomys_ordii
ENSEBUG00000009697	zgc:110045	99	76.382	ENSEASG00005007068	PCBP3	87	70.445	Equus_asinus_asinus
ENSEBUG00000009697	zgc:110045	99	76.382	ENSECAG00000012413	PCBP3	88	70.325	Equus_caballus
ENSEBUG00000009697	zgc:110045	88	79.394	ENSELUG00000019784	zgc:110045	50	77.249	Esox_lucius
ENSEBUG00000009697	zgc:110045	99	76.382	ENSFCAG00000014812	PCBP3	91	74.257	Felis_catus
ENSEBUG00000009697	zgc:110045	99	76.382	ENSFDAG00000009117	PCBP3	85	75.336	Fukomys_damarensis
ENSEBUG00000009697	zgc:110045	74	81.879	ENSFHEG00000018838	-	80	78.857	Fundulus_heteroclitus
ENSEBUG00000009697	zgc:110045	99	65.278	ENSGMOG00000005953	zgc:110045	71	65.385	Gadus_morhua
ENSEBUG00000009697	zgc:110045	89	75.000	ENSGAFG00000017864	zgc:110045	89	76.119	Gambusia_affinis
ENSEBUG00000009697	zgc:110045	99	66.822	ENSGACG00000003044	zgc:110045	72	66.953	Gasterosteus_aculeatus
ENSEBUG00000009697	zgc:110045	99	76.382	ENSGGOG00000003683	PCBP3	85	80.447	Gorilla_gorilla
ENSEBUG00000009697	zgc:110045	99	67.606	ENSHBUG00000012495	zgc:110045	72	67.373	Haplochromis_burtoni
ENSEBUG00000009697	zgc:110045	99	76.382	ENSHGLG00000018620	PCBP3	84	73.109	Heterocephalus_glaber_female
ENSEBUG00000009697	zgc:110045	99	76.382	ENSHGLG00100013590	PCBP3	84	73.109	Heterocephalus_glaber_male
ENSEBUG00000009697	zgc:110045	96	71.503	ENSHCOG00000000818	zgc:110045	94	72.683	Hippocampus_comes
ENSEBUG00000009697	zgc:110045	91	72.193	ENSIPUG00000003932	zgc:110045	76	71.359	Ictalurus_punctatus
ENSEBUG00000009697	zgc:110045	99	76.382	ENSSTOG00000007178	PCBP3	88	73.191	Ictidomys_tridecemlineatus
ENSEBUG00000009697	zgc:110045	99	76.382	ENSJJAG00000021192	Pcbp3	84	70.161	Jaculus_jaculus
ENSEBUG00000009697	zgc:110045	78	82.166	ENSKMAG00000016179	-	86	80.682	Kryptolebias_marmoratus
ENSEBUG00000009697	zgc:110045	99	67.464	ENSLBEG00000023074	zgc:110045	83	80.982	Labrus_bergylta
ENSEBUG00000009697	zgc:110045	96	75.773	ENSLAFG00000020835	PCBP3	93	73.543	Loxodonta_africana
ENSEBUG00000009697	zgc:110045	99	76.382	ENSMFAG00000034574	PCBP3	85	80.447	Macaca_fascicularis
ENSEBUG00000009697	zgc:110045	99	76.382	ENSMMUG00000003825	PCBP3	85	80.447	Macaca_mulatta
ENSEBUG00000009697	zgc:110045	99	76.382	ENSMNEG00000035551	PCBP3	85	80.447	Macaca_nemestrina
ENSEBUG00000009697	zgc:110045	99	76.382	ENSMLEG00000038785	PCBP3	85	80.447	Mandrillus_leucophaeus
ENSEBUG00000009697	zgc:110045	99	68.545	ENSMAMG00000014389	zgc:110045	75	68.220	Mastacembelus_armatus
ENSEBUG00000009697	zgc:110045	99	67.606	ENSMZEG00005011785	zgc:110045	54	67.373	Maylandia_zebra
ENSEBUG00000009697	zgc:110045	99	76.382	ENSMAUG00000007036	Pcbp3	85	74.888	Mesocricetus_auratus
ENSEBUG00000009697	zgc:110045	99	75.879	ENSMICG00000012679	PCBP3	85	79.888	Microcebus_murinus
ENSEBUG00000009697	zgc:110045	99	76.382	ENSMOCG00000016127	Pcbp3	85	75.336	Microtus_ochrogaster
ENSEBUG00000009697	zgc:110045	76	81.579	ENSMMOG00000008399	zgc:110045	85	76.667	Mola_mola
ENSEBUG00000009697	zgc:110045	87	73.143	ENSMALG00000008763	zgc:110045	86	76.667	Monopterus_albus
ENSEBUG00000009697	zgc:110045	99	77.612	MGP_CAROLIEiJ_G0015475	Pcbp3	99	76.444	Mus_caroli
ENSEBUG00000009697	zgc:110045	99	77.612	ENSMUSG00000001120	Pcbp3	99	76.444	Mus_musculus
ENSEBUG00000009697	zgc:110045	99	77.612	MGP_PahariEiJ_G0030889	Pcbp3	99	76.444	Mus_pahari
ENSEBUG00000009697	zgc:110045	99	77.612	MGP_SPRETEiJ_G0016288	Pcbp3	99	76.444	Mus_spretus
ENSEBUG00000009697	zgc:110045	99	76.382	ENSMLUG00000003074	PCBP3	88	72.766	Myotis_lucifugus
ENSEBUG00000009697	zgc:110045	99	76.382	ENSNGAG00000005416	Pcbp3	91	70.161	Nannospalax_galili
ENSEBUG00000009697	zgc:110045	99	67.606	ENSNBRG00000017646	zgc:110045	54	67.373	Neolamprologus_brichardi
ENSEBUG00000009697	zgc:110045	99	76.382	ENSNLEG00000002639	PCBP3	85	80.447	Nomascus_leucogenys
ENSEBUG00000009697	zgc:110045	99	66.968	ENSMEUG00000012960	PCBP3	63	71.366	Notamacropus_eugenii
ENSEBUG00000009697	zgc:110045	96	75.773	ENSODEG00000012873	PCBP3	88	69.748	Octodon_degus
ENSEBUG00000009697	zgc:110045	99	67.606	ENSONIG00000010370	zgc:110045	58	67.373	Oreochromis_niloticus
ENSEBUG00000009697	zgc:110045	98	68.493	ENSOANG00000006265	PCBP3	86	68.313	Ornithorhynchus_anatinus
ENSEBUG00000009697	zgc:110045	99	67.136	ENSORLG00000014385	-	54	66.949	Oryzias_latipes
ENSEBUG00000009697	zgc:110045	99	66.512	ENSORLG00020003139	zgc:110045	93	66.079	Oryzias_latipes_hni
ENSEBUG00000009697	zgc:110045	99	66.667	ENSOMEG00000015459	-	54	66.525	Oryzias_melastigma
ENSEBUG00000009697	zgc:110045	99	71.859	ENSOARG00000012704	PCBP3	78	71.300	Ovis_aries
ENSEBUG00000009697	zgc:110045	99	76.382	ENSPPAG00000021940	PCBP3	85	80.447	Pan_paniscus
ENSEBUG00000009697	zgc:110045	99	76.382	ENSPPRG00000003933	PCBP3	91	74.257	Panthera_pardus
ENSEBUG00000009697	zgc:110045	99	54.950	ENSPTIG00000012038	PCBP3	87	56.466	Panthera_tigris_altaica
ENSEBUG00000009697	zgc:110045	77	48.077	ENSPTRG00000014010	PCBP3	88	43.172	Pan_troglodytes
ENSEBUG00000009697	zgc:110045	99	76.382	ENSPANG00000023631	PCBP3	85	80.447	Papio_anubis
ENSEBUG00000009697	zgc:110045	87	63.429	ENSPMGG00000022531	-	90	62.121	Periophthalmus_magnuspinnatus
ENSEBUG00000009697	zgc:110045	99	76.382	ENSPEMG00000000587	Pcbp3	85	75.336	Peromyscus_maniculatus_bairdii
ENSEBUG00000009697	zgc:110045	66	71.287	ENSPMAG00000004719	zgc:110045	95	69.672	Petromyzon_marinus
ENSEBUG00000009697	zgc:110045	99	67.606	ENSPFOG00000002348	zgc:110045	72	68.831	Poecilia_formosa
ENSEBUG00000009697	zgc:110045	87	74.302	ENSPLAG00000017488	zgc:110045	89	72.772	Poecilia_latipinna
ENSEBUG00000009697	zgc:110045	99	67.788	ENSPMEG00000012762	zgc:110045	89	76.119	Poecilia_mexicana
ENSEBUG00000009697	zgc:110045	99	67.606	ENSPREG00000001797	zgc:110045	89	75.743	Poecilia_reticulata
ENSEBUG00000009697	zgc:110045	99	76.382	ENSPPYG00000011525	-	73	76.382	Pongo_abelii
ENSEBUG00000009697	zgc:110045	99	51.584	ENSPCAG00000001454	PCBP3	63	60.248	Procavia_capensis
ENSEBUG00000009697	zgc:110045	99	75.879	ENSPCOG00000013797	PCBP3	91	73.267	Propithecus_coquereli
ENSEBUG00000009697	zgc:110045	90	71.429	ENSPVAG00000000832	PCBP3	63	70.925	Pteropus_vampyrus
ENSEBUG00000009697	zgc:110045	87	74.302	ENSPNYG00000004637	zgc:110045	94	71.014	Pundamilia_nyererei
ENSEBUG00000009697	zgc:110045	91	73.797	ENSPNAG00000004501	zgc:110045	94	72.381	Pygocentrus_nattereri
ENSEBUG00000009697	zgc:110045	99	76.382	ENSRROG00000034567	PCBP3	85	80.447	Rhinopithecus_roxellana
ENSEBUG00000009697	zgc:110045	99	76.382	ENSSBOG00000005789	PCBP3	91	73.762	Saimiri_boliviensis_boliviensis
ENSEBUG00000009697	zgc:110045	95	72.081	ENSSMAG00000013541	zgc:110045	93	71.364	Scophthalmus_maximus
ENSEBUG00000009697	zgc:110045	99	67.606	ENSSLDG00000021064	zgc:110045	54	67.373	Seriola_lalandi_dorsalis
ENSEBUG00000009697	zgc:110045	68	78.832	ENSSARG00000007629	-	68	78.832	Sorex_araneus
ENSEBUG00000009697	zgc:110045	99	67.606	ENSSPAG00000000563	zgc:110045	72	67.373	Stegastes_partitus
ENSEBUG00000009697	zgc:110045	99	76.382	ENSSSCG00000023041	PCBP3	85	72.269	Sus_scrofa
ENSEBUG00000009697	zgc:110045	88	82.166	ENSTRUG00000017789	zgc:110045	89	80.000	Takifugu_rubripes
ENSEBUG00000009697	zgc:110045	78	80.255	ENSTNIG00000003546	zgc:110045	79	78.882	Tetraodon_nigroviridis
ENSEBUG00000009697	zgc:110045	95	58.115	ENSTBEG00000011882	-	70	57.399	Tupaia_belangeri
ENSEBUG00000009697	zgc:110045	96	75.773	ENSUAMG00000006491	PCBP3	92	76.250	Ursus_americanus
ENSEBUG00000009697	zgc:110045	86	66.509	ENSUMAG00000025403	PCBP3	83	66.509	Ursus_maritimus
ENSEBUG00000009697	zgc:110045	99	71.357	ENSVVUG00000023862	PCBP3	57	72.727	Vulpes_vulpes
ENSEBUG00000009697	zgc:110045	69	79.856	ENSXCOG00000005968	zgc:110045	90	71.348	Xiphophorus_couchianus
ENSEBUG00000009697	zgc:110045	99	67.606	ENSXMAG00000008030	zgc:110045	54	68.831	Xiphophorus_maculatus