EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000009706 (Gene tree)
Gene ID: -
Gene Symbol: sall3b
Alias: sall3
Full Name: spalt-like transcription factor 3b
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 31868 bases
Position: chrFYBX02010170.1:2590913-2622780
Accession: ZDB-GENE-030131-9140
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000015388	zf-C2H2	PF00096.26	2.3e-22	1	5
ENSEBUP00000015388	zf-C2H2	PF00096.26	2.3e-22	2	5
ENSEBUP00000015388	zf-C2H2	PF00096.26	2.3e-22	3	5
ENSEBUP00000015388	zf-C2H2	PF00096.26	2.3e-22	4	5
ENSEBUP00000015388	zf-C2H2	PF00096.26	2.3e-22	5	5
ENSEBUP00000015388	zf-met	PF12874.7	2.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000015964	-	7779	-	ENSEBUP00000015388	1267 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000009706's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000009706's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000009706	sall3b	57	68.085	ENSEBUG00000008798	SALL1	55	68.085

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000009706	sall3b	54	65.306	ENSG00000256463	SALL3	65	65.306	Homo_sapiens
ENSEBUG00000009706	sall3b	76	37.028	ENSAPLG00000013214	SALL3	69	40.437	Anas_platyrhynchos
ENSEBUG00000009706	sall3b	53	65.306	ENSANAG00000032412	SALL3	70	65.306	Aotus_nancymaae
ENSEBUG00000009706	sall3b	63	63.462	ENSAMXG00000011185	sall3a	59	63.462	Astyanax_mexicanus
ENSEBUG00000009706	sall3b	74	65.306	ENSBTAG00000050200	SALL3	92	65.306	Bos_taurus
ENSEBUG00000009706	sall3b	55	65.306	ENSCJAG00000007332	SALL3	71	65.306	Callithrix_jacchus
ENSEBUG00000009706	sall3b	50	65.306	ENSCAFG00020015092	SALL3	57	65.306	Canis_lupus_dingo
ENSEBUG00000009706	sall3b	55	65.306	ENSCAPG00000006496	SALL3	74	36.508	Cavia_aperea
ENSEBUG00000009706	sall3b	51	65.306	ENSCATG00000029727	SALL3	65	65.306	Cercocebus_atys
ENSEBUG00000009706	sall3b	51	65.306	ENSCSAG00000018244	SALL3	65	65.306	Chlorocebus_sabaeus
ENSEBUG00000009706	sall3b	79	65.306	ENSCPBG00000003657	SALL3	97	65.306	Chrysemys_picta_bellii
ENSEBUG00000009706	sall3b	83	65.306	ENSCGRG00001018203	Sall3	78	63.462	Cricetulus_griseus_chok1gshd
ENSEBUG00000009706	sall3b	73	59.615	ENSCGRG00000017127	Sall3	74	59.615	Cricetulus_griseus_crigri
ENSEBUG00000009706	sall3b	53	65.306	ENSDNOG00000025483	SALL3	85	65.306	Dasypus_novemcinctus
ENSEBUG00000009706	sall3b	74	65.306	ENSEASG00005002071	SALL3	97	36.654	Equus_asinus_asinus
ENSEBUG00000009706	sall3b	74	63.462	ENSECAG00000015414	SALL3	75	63.462	Equus_caballus
ENSEBUG00000009706	sall3b	61	35.939	ENSFALG00000013343	SALL3	66	40.914	Ficedula_albicollis
ENSEBUG00000009706	sall3b	87	65.306	ENSGALG00000041404	SALL3	69	65.306	Gallus_gallus
ENSEBUG00000009706	sall3b	78	63.699	ENSGACG00000002533	sall3b	74	63.699	Gasterosteus_aculeatus
ENSEBUG00000009706	sall3b	54	65.306	ENSGGOG00000008127	SALL3	65	65.306	Gorilla_gorilla
ENSEBUG00000009706	sall3b	50	65.306	ENSHGLG00100008694	SALL3	50	63.462	Heterocephalus_glaber_male
ENSEBUG00000009706	sall3b	77	63.462	ENSIPUG00000003006	sall3b	68	40.810	Ictalurus_punctatus
ENSEBUG00000009706	sall3b	73	65.306	ENSSTOG00000004145	SALL3	96	37.121	Ictidomys_tridecemlineatus
ENSEBUG00000009706	sall3b	75	65.306	ENSJJAG00000014351	Sall3	78	65.306	Jaculus_jaculus
ENSEBUG00000009706	sall3b	54	59.615	ENSLBEG00000015706	sall3b	66	59.615	Labrus_bergylta
ENSEBUG00000009706	sall3b	51	65.306	ENSMFAG00000031402	SALL3	70	65.306	Macaca_fascicularis
ENSEBUG00000009706	sall3b	51	65.306	ENSMMUG00000000286	SALL3	67	65.306	Macaca_mulatta
ENSEBUG00000009706	sall3b	51	65.306	ENSMNEG00000029916	SALL3	66	65.306	Macaca_nemestrina
ENSEBUG00000009706	sall3b	61	35.954	ENSMGAG00000002297	SALL3	67	40.368	Meleagris_gallopavo
ENSEBUG00000009706	sall3b	83	65.306	ENSMAUG00000011828	Sall3	78	63.462	Mesocricetus_auratus
ENSEBUG00000009706	sall3b	52	65.306	ENSMICG00000017395	SALL3	60	63.462	Microcebus_murinus
ENSEBUG00000009706	sall3b	61	35.315	ENSMODG00000012231	SALL3	67	40.000	Monodelphis_domestica
ENSEBUG00000009706	sall3b	74	65.306	MGP_PahariEiJ_G0019170	Sall3	77	63.462	Mus_pahari
ENSEBUG00000009706	sall3b	62	65.306	ENSMPUG00000016646	SALL3	96	34.710	Mustela_putorius_furo
ENSEBUG00000009706	sall3b	76	65.306	ENSNGAG00000023772	Sall3	81	65.306	Nannospalax_galili
ENSEBUG00000009706	sall3b	54	65.306	ENSNLEG00000008217	SALL3	65	65.306	Nomascus_leucogenys
ENSEBUG00000009706	sall3b	54	63.462	ENSORLG00020015105	sall3b	56	63.462	Oryzias_latipes_hni
ENSEBUG00000009706	sall3b	63	63.462	ENSORLG00015005877	sall3b	59	63.462	Oryzias_latipes_hsok
ENSEBUG00000009706	sall3b	50	57.895	ENSOARG00000004353	SALL3	83	57.895	Ovis_aries
ENSEBUG00000009706	sall3b	52	68.182	ENSPPAG00000029586	-	81	68.182	Pan_paniscus
ENSEBUG00000009706	sall3b	52	65.306	ENSPTRG00000010126	SALL3	66	65.306	Pan_troglodytes
ENSEBUG00000009706	sall3b	54	63.462	ENSPANG00000006485	SALL3	65	63.462	Papio_anubis
ENSEBUG00000009706	sall3b	65	39.869	ENSPSIG00000008556	SALL3	97	38.011	Pelodiscus_sinensis
ENSEBUG00000009706	sall3b	77	65.306	ENSPCIG00000002472	SALL3	97	65.306	Phascolarctos_cinereus
ENSEBUG00000009706	sall3b	71	63.462	ENSPLAG00000018123	sall3a	56	63.462	Poecilia_latipinna
ENSEBUG00000009706	sall3b	62	63.462	ENSPCAG00000006522	SALL3	71	63.462	Procavia_capensis
ENSEBUG00000009706	sall3b	52	65.306	ENSPCOG00000012553	SALL3	82	65.306	Propithecus_coquereli
ENSEBUG00000009706	sall3b	53	65.306	ENSRBIG00000036190	SALL3	68	65.306	Rhinopithecus_bieti
ENSEBUG00000009706	sall3b	53	65.306	ENSRROG00000034130	SALL3	72	65.306	Rhinopithecus_roxellana
ENSEBUG00000009706	sall3b	61	36.128	ENSSHAG00000015872	SALL3	97	36.055	Sarcophilus_harrisii
ENSEBUG00000009706	sall3b	66	63.462	ENSSFOG00015009159	SALL3	68	63.462	Scleropages_formosus
ENSEBUG00000009706	sall3b	71	65.385	ENSSMAG00000007674	sall3a	69	65.385	Scophthalmus_maximus
ENSEBUG00000009706	sall3b	57	63.462	ENSSDUG00000011099	sall3a	73	63.462	Seriola_dumerili
ENSEBUG00000009706	sall3b	57	63.462	ENSSLDG00000012706	sall3a	73	63.462	Seriola_lalandi_dorsalis
ENSEBUG00000009706	sall3b	76	65.306	ENSSSCG00000004858	SALL3	77	65.306	Sus_scrofa
ENSEBUG00000009706	sall3b	76	65.306	ENSXETG00000000845	sall3	77	65.306	Xenopus_tropicalis
ENSEBUG00000009706	sall3b	51	63.462	ENSXCOG00000018799	sall3b	73	63.462	Xiphophorus_couchianus