EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000009897 (Gene tree)
Gene ID: -
Gene Symbol: pop1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 16359 bases
Position: chrFYBX02010802.1:80057-96415
Accession: ZDB-GENE-120911-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000015714	POP1	PF06978.11	1.3e-36	1	2
ENSEBUP00000015714	POP1	PF06978.11	1.3e-36	2	2
ENSEBUP00000015735	POP1	PF06978.11	1.9e-36	1	2
ENSEBUP00000015735	POP1	PF06978.11	1.9e-36	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000016290	-	2446	-	ENSEBUP00000015714	429 (aa)	-	-
ENSEBUT00000016311	-	2159	-	ENSEBUP00000015735	491 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000009897's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000009897's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000009897	pop1	88	46.742	ENSG00000104356	POP1	51	54.255	Homo_sapiens
ENSEBUG00000009897	pop1	96	43.945	ENSAPOG00000008198	pop1	52	43.945	Acanthochromis_polyacanthus
ENSEBUG00000009897	pop1	96	44.332	ENSACIG00000004169	POP1	51	44.332	Amphilophus_citrinellus
ENSEBUG00000009897	pop1	96	42.886	ENSAPEG00000007607	pop1	51	43.496	Amphiprion_percula
ENSEBUG00000009897	pop1	96	44.618	ENSATEG00000024814	POP1	52	45.205	Anabas_testudineus
ENSEBUG00000009897	pop1	95	43.249	ENSAMXG00000014483	POP1	50	43.249	Astyanax_mexicanus
ENSEBUG00000009897	pop1	96	42.857	ENSCJAG00000015567	POP1	50	42.857	Callithrix_jacchus
ENSEBUG00000009897	pop1	96	43.633	ENSCAFG00000000469	POP1	53	43.633	Canis_familiaris
ENSEBUG00000009897	pop1	96	43.633	ENSCAFG00020026765	POP1	51	43.633	Canis_lupus_dingo
ENSEBUG00000009897	pop1	96	42.998	ENSCCAG00000018939	POP1	77	45.567	Cebus_capucinus
ENSEBUG00000009897	pop1	96	41.935	ENSCPBG00000006373	POP1	52	42.505	Chrysemys_picta_bellii
ENSEBUG00000009897	pop1	96	43.654	ENSCSEG00000008737	POP1	52	43.654	Cynoglossus_semilaevis
ENSEBUG00000009897	pop1	96	44.699	ENSDARG00000102087	pop1	97	45.094	Danio_rerio
ENSEBUG00000009897	pop1	96	42.938	ENSEASG00005003189	POP1	50	42.938	Equus_asinus_asinus
ENSEBUG00000009897	pop1	95	45.312	ENSELUG00000003526	pop1	53	46.004	Esox_lucius
ENSEBUG00000009897	pop1	96	43.775	ENSIPUG00000018336	pop1	50	43.775	Ictalurus_punctatus
ENSEBUG00000009897	pop1	96	40.421	ENSJJAG00000013325	Pop1	51	40.421	Jaculus_jaculus
ENSEBUG00000009897	pop1	88	46.696	ENSKMAG00000001346	POP1	52	43.615	Kryptolebias_marmoratus
ENSEBUG00000009897	pop1	87	49.206	ENSLOCG00000009817	POP1	51	44.854	Lepisosteus_oculatus
ENSEBUG00000009897	pop1	96	43.714	ENSMAMG00000004040	pop1	52	43.714	Mastacembelus_armatus
ENSEBUG00000009897	pop1	87	46.560	ENSMICG00000004361	POP1	51	42.095	Microcebus_murinus
ENSEBUG00000009897	pop1	96	44.856	ENSMMOG00000018242	pop1	51	44.856	Mola_mola
ENSEBUG00000009897	pop1	96	44.379	ENSMALG00000012621	POP1	51	44.379	Monopterus_albus
ENSEBUG00000009897	pop1	96	42.667	ENSMLUG00000010204	POP1	51	42.667	Myotis_lucifugus
ENSEBUG00000009897	pop1	71	61.194	ENSOANG00000001278	-	57	61.194	Ornithorhynchus_anatinus
ENSEBUG00000009897	pop1	96	44.356	ENSORLG00000002839	pop1	52	45.129	Oryzias_latipes
ENSEBUG00000009897	pop1	96	43.874	ENSORLG00015012746	POP1	53	44.466	Oryzias_latipes_hsok
ENSEBUG00000009897	pop1	96	43.775	ENSOMEG00000006915	pop1	53	43.775	Oryzias_melastigma
ENSEBUG00000009897	pop1	51	42.205	ENSOARG00000003457	-	58	42.205	Ovis_aries
ENSEBUG00000009897	pop1	97	45.315	ENSPKIG00000016325	POP1	53	45.889	Paramormyrops_kingsleyae
ENSEBUG00000009897	pop1	96	44.355	ENSPMGG00000022253	POP1	50	44.355	Periophthalmus_magnuspinnatus
ENSEBUG00000009897	pop1	96	42.383	ENSPFOG00000012490	POP1	52	42.383	Poecilia_formosa
ENSEBUG00000009897	pop1	96	42.383	ENSPMEG00000019592	POP1	53	42.383	Poecilia_mexicana
ENSEBUG00000009897	pop1	95	43.340	ENSPNAG00000000265	pop1	50	43.340	Pygocentrus_nattereri
ENSEBUG00000009897	pop1	95	46.000	ENSSFOG00015007429	pop1	52	45.437	Scleropages_formosus
ENSEBUG00000009897	pop1	96	44.877	ENSSPAG00000014955	pop1	51	45.492	Stegastes_partitus
ENSEBUG00000009897	pop1	69	42.953	ENSTGUG00000014352	-	99	42.953	Taeniopygia_guttata
ENSEBUG00000009897	pop1	98	43.293	ENSTRUG00000010856	pop1	52	43.293	Takifugu_rubripes
ENSEBUG00000009897	pop1	94	45.528	ENSUAMG00000017309	POP1	50	45.528	Ursus_americanus
ENSEBUG00000009897	pop1	96	43.182	ENSVVUG00000010994	POP1	51	43.182	Vulpes_vulpes
ENSEBUG00000009897	pop1	96	42.353	ENSXMAG00000002472	POP1	52	42.941	Xiphophorus_maculatus