EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000010003 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 82222 bases
Position: chrFYBX02009825.1:1354290-1436511
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000015896	RRM_1	PF00076.22	4.2e-31	1	2
ENSEBUP00000015896	RRM_1	PF00076.22	4.2e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000016472	-	576	-	ENSEBUP00000015896	191 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000010003's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000010003's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000010003	-	80	38.158	ENSEBUG00000015164	rbm38	59	38.158
ENSEBUG00000010003	-	79	40.940	ENSEBUG00000009297	HNRNPA0	50	40.940
ENSEBUG00000010003	-	80	41.830	ENSEBUG00000016570	HNRNPA0	52	41.830
ENSEBUG00000010003	-	81	44.444	ENSEBUG00000008843	hnrnpa1b	74	39.490

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000010003	-	80	39.869	ENSAOCG00000015951	-	92	39.869	Amphiprion_ocellaris
ENSEBUG00000010003	-	82	35.762	ENSAOCG00000015914	-	63	35.762	Amphiprion_ocellaris
ENSEBUG00000010003	-	80	39.869	ENSAPEG00000002274	-	92	39.869	Amphiprion_percula
ENSEBUG00000010003	-	80	35.762	ENSAPEG00000002224	-	74	35.762	Amphiprion_percula
ENSEBUG00000010003	-	80	37.086	ENSACLG00000008978	-	81	37.086	Astatotilapia_calliptera
ENSEBUG00000010003	-	80	35.849	ENSCVAG00000008324	-	76	34.416	Cyprinodon_variegatus
ENSEBUG00000010003	-	81	40.994	FBgn0001215	Hrb98DE	52	40.994	Drosophila_melanogaster
ENSEBUG00000010003	-	80	37.255	ENSELUG00000014407	-	91	37.013	Esox_lucius
ENSEBUG00000010003	-	80	37.086	ENSHBUG00000023867	-	81	37.086	Haplochromis_burtoni
ENSEBUG00000010003	-	92	36.095	ENSHCOG00000007180	-	75	36.957	Hippocampus_comes
ENSEBUG00000010003	-	79	35.099	ENSLBEG00000006362	-	73	35.099	Labrus_bergylta
ENSEBUG00000010003	-	54	36.190	ENSLOCG00000012121	-	57	36.190	Lepisosteus_oculatus
ENSEBUG00000010003	-	81	38.202	ENSMAMG00000017728	-	66	36.508	Mastacembelus_armatus
ENSEBUG00000010003	-	80	37.086	ENSMZEG00005001063	-	79	37.086	Maylandia_zebra
ENSEBUG00000010003	-	80	39.869	ENSMMOG00000004242	-	92	39.869	Mola_mola
ENSEBUG00000010003	-	79	38.000	ENSORLG00000023542	-	58	37.805	Oryzias_latipes
ENSEBUG00000010003	-	80	37.086	ENSORLG00000023176	-	57	37.086	Oryzias_latipes
ENSEBUG00000010003	-	84	33.333	ENSORLG00000030284	-	81	33.333	Oryzias_latipes
ENSEBUG00000010003	-	88	37.975	ENSORLG00020006029	-	58	37.975	Oryzias_latipes_hni
ENSEBUG00000010003	-	92	32.955	ENSORLG00020007084	-	79	32.955	Oryzias_latipes_hni
ENSEBUG00000010003	-	90	34.375	ENSORLG00020007171	-	96	34.375	Oryzias_latipes_hni
ENSEBUG00000010003	-	90	37.079	ENSOMEG00000006903	-	57	37.079	Oryzias_melastigma
ENSEBUG00000010003	-	90	39.355	ENSOMEG00000002000	-	60	39.355	Oryzias_melastigma
ENSEBUG00000010003	-	87	36.471	ENSOMEG00000023475	-	60	36.471	Oryzias_melastigma
ENSEBUG00000010003	-	87	37.086	ENSOMEG00000012368	-	60	37.086	Oryzias_melastigma
ENSEBUG00000010003	-	87	38.667	ENSOMEG00000021030	-	76	38.667	Oryzias_melastigma
ENSEBUG00000010003	-	89	38.323	ENSOMEG00000002509	-	71	37.059	Oryzias_melastigma
ENSEBUG00000010003	-	84	37.423	ENSOMEG00000009566	-	84	37.423	Oryzias_melastigma
ENSEBUG00000010003	-	88	36.250	ENSOMEG00000006327	-	60	36.250	Oryzias_melastigma
ENSEBUG00000010003	-	80	35.849	ENSPREG00000010603	-	58	34.416	Poecilia_reticulata
ENSEBUG00000010003	-	80	37.086	ENSPNYG00000020763	-	81	37.086	Pundamilia_nyererei
ENSEBUG00000010003	-	80	39.610	ENSPNAG00000018051	-	76	39.610	Pygocentrus_nattereri
ENSEBUG00000010003	-	81	34.194	ENSSHAG00000015609	-	81	34.194	Sarcophilus_harrisii
ENSEBUG00000010003	-	79	36.424	ENSSDUG00000002394	-	81	36.424	Seriola_dumerili
ENSEBUG00000010003	-	80	38.961	ENSSLDG00000024685	-	87	38.961	Seriola_lalandi_dorsalis