EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000010146 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 55960 bases
Position: chrFYBX02010448.1:906558-962517
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000016148	DEAD	PF00270.29	1.1e-13	1	1
ENSEBUP00000016138	DEAD	PF00270.29	1.2e-13	1	1
ENSEBUP00000016175	DEAD	PF00270.29	4.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000016751	-	1768	-	ENSEBUP00000016175	249 (aa)	-	-
ENSEBUT00000016724	-	1907	-	ENSEBUP00000016148	292 (aa)	-	-
ENSEBUT00000016714	-	2836	-	ENSEBUP00000016138	303 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000010146's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000010146's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000010146	-	83	32.645	ENSEBUG00000003713	eif4a3	54	33.061
ENSEBUG00000010146	-	82	31.799	ENSEBUG00000009705	eif4a1b	61	31.799

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000010146	-	84	65.984	ENSAPLG00000010182	-	51	65.984	Anas_platyrhynchos
ENSEBUG00000010146	-	79	65.368	ENSGMOG00000004178	ddx43	50	65.368	Gadus_morhua
ENSEBUG00000010146	-	84	65.164	ENSGALG00000015928	-	56	65.164	Gallus_gallus
ENSEBUG00000010146	-	84	62.825	ENSOANG00000010479	-	87	62.825	Ornithorhynchus_anatinus
ENSEBUG00000010146	-	84	66.393	ENSPCIG00000017981	-	55	66.393	Phascolarctos_cinereus
ENSEBUG00000010146	-	84	67.213	ENSSPUG00000018097	-	53	67.213	Sphenodon_punctatus