EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000010394 (Gene tree)
Gene ID: -
Gene Symbol: LARP4 (1 of many)
Alias: PP13296
Full Name: La ribonucleoprotein domain family member 4
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 104752 bases
Position: chrFYBX02009436.1:653517-758268
Accession: 24320
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000016595	La	PF05383.17	8.2e-21	1	1
ENSEBUP00000016572	La	PF05383.17	1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000017148	LARP4 (1 of many)-201	2913	-	ENSEBUP00000016572	734 (aa)	-	-
ENSEBUT00000017171	LARP4 (1 of many)-202	2638	-	ENSEBUP00000016595	613 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000010394's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000010394's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000010394	LARP4	79	39.675	ENSEBUG00000004426	LARP4	95	40.394

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000010394	LARP4	81	59.686	ENSG00000161813	LARP4	76	67.133	Homo_sapiens
ENSEBUG00000010394	LARP4	71	52.985	ENSAPOG00000007142	larp4aa	53	42.857	Acanthochromis_polyacanthus
ENSEBUG00000010394	LARP4	85	37.345	ENSAPOG00000021331	larp4ab	71	38.339	Acanthochromis_polyacanthus
ENSEBUG00000010394	LARP4	87	39.711	ENSAMEG00000001275	LARP4	73	40.975	Ailuropoda_melanoleuca
ENSEBUG00000010394	LARP4	71	53.962	ENSAOCG00000002408	larp4aa	53	43.596	Amphiprion_ocellaris
ENSEBUG00000010394	LARP4	85	37.719	ENSAOCG00000006387	larp4ab	71	37.544	Amphiprion_ocellaris
ENSEBUG00000010394	LARP4	71	53.962	ENSAPEG00000019058	larp4aa	65	39.580	Amphiprion_percula
ENSEBUG00000010394	LARP4	89	36.842	ENSATEG00000001018	larp4ab	77	37.541	Anabas_testudineus
ENSEBUG00000010394	LARP4	85	38.121	ENSATEG00000020715	larp4aa	69	37.871	Anabas_testudineus
ENSEBUG00000010394	LARP4	84	41.101	ENSAPLG00000013661	LARP4	87	35.838	Anas_platyrhynchos
ENSEBUG00000010394	LARP4	69	55.311	ENSACAG00000017133	LARP4	84	36.390	Anolis_carolinensis
ENSEBUG00000010394	LARP4	81	59.162	ENSANAG00000029342	LARP4	85	44.073	Aotus_nancymaae
ENSEBUG00000010394	LARP4	67	53.957	ENSAMXG00000036493	larp4aa	53	56.554	Astyanax_mexicanus
ENSEBUG00000010394	LARP4	68	43.088	ENSAMXG00000001515	larp4ab	69	41.071	Astyanax_mexicanus
ENSEBUG00000010394	LARP4	91	37.833	ENSBTAG00000017164	LARP4	77	39.626	Bos_taurus
ENSEBUG00000010394	LARP4	81	59.162	ENSCJAG00000021131	LARP4	85	43.478	Callithrix_jacchus
ENSEBUG00000010394	LARP4	87	39.362	ENSCAFG00000008174	LARP4	80	38.498	Canis_familiaris
ENSEBUG00000010394	LARP4	81	60.733	ENSCAFG00020014554	LARP4	70	60.733	Canis_lupus_dingo
ENSEBUG00000010394	LARP4	91	36.688	ENSCHIG00000025965	LARP4	77	38.926	Capra_hircus
ENSEBUG00000010394	LARP4	81	59.162	ENSTSYG00000004342	LARP4	85	44.201	Carlito_syrichta
ENSEBUG00000010394	LARP4	87	35.548	ENSCPOG00000020519	LARP4	87	33.623	Cavia_porcellus
ENSEBUG00000010394	LARP4	81	59.162	ENSCCAG00000024439	LARP4	70	59.162	Cebus_capucinus
ENSEBUG00000010394	LARP4	89	35.474	ENSCATG00000044528	LARP4	88	35.429	Cercocebus_atys
ENSEBUG00000010394	LARP4	89	38.793	ENSCLAG00000001829	LARP4	73	41.007	Chinchilla_lanigera
ENSEBUG00000010394	LARP4	89	39.551	ENSCPBG00000019407	LARP4	68	39.310	Chrysemys_picta_bellii
ENSEBUG00000010394	LARP4	81	59.686	ENSCANG00000029159	-	85	43.849	Colobus_angolensis_palliatus
ENSEBUG00000010394	LARP4	84	36.131	ENSCANG00000033097	-	55	64.567	Colobus_angolensis_palliatus
ENSEBUG00000010394	LARP4	87	40.000	ENSCGRG00001010818	Larp4	63	43.381	Cricetulus_griseus_chok1gshd
ENSEBUG00000010394	LARP4	87	40.000	ENSCGRG00000009382	Larp4	62	44.050	Cricetulus_griseus_crigri
ENSEBUG00000010394	LARP4	95	36.210	ENSCSEG00000001963	larp4aa	77	36.574	Cynoglossus_semilaevis
ENSEBUG00000010394	LARP4	85	38.783	ENSCVAG00000005488	larp4aa	69	39.062	Cyprinodon_variegatus
ENSEBUG00000010394	LARP4	66	55.762	ENSDARG00000078401	larp4aa	69	39.896	Danio_rerio
ENSEBUG00000010394	LARP4	88	38.014	ENSDARG00000074979	larp4ab	79	66.434	Danio_rerio
ENSEBUG00000010394	LARP4	91	39.866	ENSDNOG00000038525	LARP4	76	40.847	Dasypus_novemcinctus
ENSEBUG00000010394	LARP4	87	37.262	ENSDORG00000004013	Larp4	69	37.679	Dipodomys_ordii
ENSEBUG00000010394	LARP4	74	68.841	ENSEASG00005004356	LARP4	71	68.841	Equus_asinus_asinus
ENSEBUG00000010394	LARP4	87	39.965	ENSECAG00000012479	LARP4	80	40.314	Equus_caballus
ENSEBUG00000010394	LARP4	81	60.733	ENSFCAG00000031897	LARP4	70	60.733	Felis_catus
ENSEBUG00000010394	LARP4	68	42.326	ENSFALG00000002114	LARP4	97	36.681	Ficedula_albicollis
ENSEBUG00000010394	LARP4	89	37.755	ENSFDAG00000006406	-	73	41.113	Fukomys_damarensis
ENSEBUG00000010394	LARP4	86	38.959	ENSFHEG00000013854	larp4ab	72	36.380	Fundulus_heteroclitus
ENSEBUG00000010394	LARP4	85	38.045	ENSFHEG00000004338	larp4aa	53	56.589	Fundulus_heteroclitus
ENSEBUG00000010394	LARP4	85	41.026	ENSGMOG00000008246	larp4aa	56	42.350	Gadus_morhua
ENSEBUG00000010394	LARP4	91	36.752	ENSGALG00000042122	LARP4	74	38.448	Gallus_gallus
ENSEBUG00000010394	LARP4	90	35.193	ENSGAFG00000021777	larp4ab	87	35.201	Gambusia_affinis
ENSEBUG00000010394	LARP4	87	38.681	ENSGACG00000000680	larp4ab	72	38.011	Gasterosteus_aculeatus
ENSEBUG00000010394	LARP4	85	40.108	ENSGACG00000008381	larp4aa	71	54.340	Gasterosteus_aculeatus
ENSEBUG00000010394	LARP4	87	39.677	ENSGAGG00000006969	LARP4	80	37.931	Gopherus_agassizii
ENSEBUG00000010394	LARP4	87	52.917	ENSGGOG00000015230	LARP4	80	50.318	Gorilla_gorilla
ENSEBUG00000010394	LARP4	59	42.105	ENSHGLG00000010979	-	82	42.105	Heterocephalus_glaber_female
ENSEBUG00000010394	LARP4	86	39.522	ENSHGLG00000013875	-	85	39.011	Heterocephalus_glaber_female
ENSEBUG00000010394	LARP4	89	38.754	ENSHGLG00000005513	-	80	40.145	Heterocephalus_glaber_female
ENSEBUG00000010394	LARP4	86	39.714	ENSHGLG00100011678	-	75	39.640	Heterocephalus_glaber_male
ENSEBUG00000010394	LARP4	59	42.105	ENSHGLG00100002832	-	82	42.105	Heterocephalus_glaber_male
ENSEBUG00000010394	LARP4	89	38.860	ENSHGLG00100016984	-	73	40.325	Heterocephalus_glaber_male
ENSEBUG00000010394	LARP4	86	37.919	ENSHCOG00000020857	larp4ab	72	37.633	Hippocampus_comes
ENSEBUG00000010394	LARP4	85	39.177	ENSHCOG00000015951	larp4aa	52	44.316	Hippocampus_comes
ENSEBUG00000010394	LARP4	85	36.926	ENSIPUG00000007514	larp4aa	75	36.741	Ictalurus_punctatus
ENSEBUG00000010394	LARP4	85	39.483	ENSIPUG00000021659	larp4ab	70	40.449	Ictalurus_punctatus
ENSEBUG00000010394	LARP4	87	39.965	ENSSTOG00000003553	LARP4	79	39.604	Ictidomys_tridecemlineatus
ENSEBUG00000010394	LARP4	70	53.261	ENSKMAG00000006800	larp4aa	56	55.303	Kryptolebias_marmoratus
ENSEBUG00000010394	LARP4	88	35.559	ENSKMAG00000018556	larp4ab	85	34.700	Kryptolebias_marmoratus
ENSEBUG00000010394	LARP4	85	38.448	ENSLBEG00000014537	larp4aa	51	43.919	Labrus_bergylta
ENSEBUG00000010394	LARP4	86	38.324	ENSLBEG00000019306	larp4ab	74	37.435	Labrus_bergylta
ENSEBUG00000010394	LARP4	92	38.202	ENSLACG00000019090	LARP4	78	36.789	Latimeria_chalumnae
ENSEBUG00000010394	LARP4	87	41.039	ENSLAFG00000005160	LARP4	87	39.439	Loxodonta_africana
ENSEBUG00000010394	LARP4	87	40.502	ENSMFAG00000043681	LARP4	85	42.927	Macaca_fascicularis
ENSEBUG00000010394	LARP4	87	40.502	ENSMMUG00000008172	LARP4	85	42.927	Macaca_mulatta
ENSEBUG00000010394	LARP4	87	40.502	ENSMNEG00000034602	LARP4	84	38.245	Macaca_nemestrina
ENSEBUG00000010394	LARP4	71	57.500	ENSMNEG00000037799	-	76	52.000	Macaca_nemestrina
ENSEBUG00000010394	LARP4	81	59.896	ENSMLEG00000039661	LARP4	70	58.883	Mandrillus_leucophaeus
ENSEBUG00000010394	LARP4	75	38.715	ENSMAMG00000011206	larp4aa	80	36.195	Mastacembelus_armatus
ENSEBUG00000010394	LARP4	87	35.171	ENSMGAG00000010598	LARP4	85	35.549	Meleagris_gallopavo
ENSEBUG00000010394	LARP4	66	43.478	ENSMICG00000030156	-	66	67.910	Microcebus_murinus
ENSEBUG00000010394	LARP4	82	58.794	ENSMICG00000012388	-	61	58.794	Microcebus_murinus
ENSEBUG00000010394	LARP4	87	40.820	ENSMOCG00000020635	Larp4	73	40.708	Microtus_ochrogaster
ENSEBUG00000010394	LARP4	85	37.900	ENSMMOG00000004785	larp4aa	52	41.763	Mola_mola
ENSEBUG00000010394	LARP4	85	35.940	ENSMMOG00000021861	larp4ab	74	44.689	Mola_mola
ENSEBUG00000010394	LARP4	87	37.226	MGP_CAROLIEiJ_G0020281	Larp4	57	58.222	Mus_caroli
ENSEBUG00000010394	LARP4	87	41.250	ENSMUSG00000023025	Larp4	87	38.779	Mus_musculus
ENSEBUG00000010394	LARP4	87	41.935	MGP_PahariEiJ_G0020284	Larp4	73	41.935	Mus_pahari
ENSEBUG00000010394	LARP4	87	39.099	ENSMPUG00000008706	LARP4	54	45.775	Mustela_putorius_furo
ENSEBUG00000010394	LARP4	87	40.314	ENSMLUG00000012513	-	55	46.620	Myotis_lucifugus
ENSEBUG00000010394	LARP4	87	38.393	ENSNGAG00000001577	-	87	38.284	Nannospalax_galili
ENSEBUG00000010394	LARP4	81	59.686	ENSNLEG00000017798	LARP4	70	59.686	Nomascus_leucogenys
ENSEBUG00000010394	LARP4	89	39.965	ENSODEG00000009770	LARP4	88	37.283	Octodon_degus
ENSEBUG00000010394	LARP4	65	53.962	ENSONIG00000011895	larp4aa	69	38.556	Oreochromis_niloticus
ENSEBUG00000010394	LARP4	86	35.849	ENSONIG00000019124	larp4ab	74	35.938	Oreochromis_niloticus
ENSEBUG00000010394	LARP4	69	44.719	ENSOANG00000004373	LARP4	73	47.045	Ornithorhynchus_anatinus
ENSEBUG00000010394	LARP4	87	41.533	ENSOCUG00000021417	-	69	40.747	Oryctolagus_cuniculus
ENSEBUG00000010394	LARP4	87	41.030	ENSOCUG00000026872	-	69	41.281	Oryctolagus_cuniculus
ENSEBUG00000010394	LARP4	84	40.036	ENSORLG00000006758	larp4aa	53	56.589	Oryzias_latipes
ENSEBUG00000010394	LARP4	84	39.432	ENSORLG00020010258	larp4aa	53	56.589	Oryzias_latipes_hni
ENSEBUG00000010394	LARP4	84	39.254	ENSORLG00015002292	larp4aa	53	56.589	Oryzias_latipes_hsok
ENSEBUG00000010394	LARP4	85	40.187	ENSOMEG00000019749	larp4aa	72	68.613	Oryzias_melastigma
ENSEBUG00000010394	LARP4	68	43.326	ENSOGAG00000001415	LARP4	89	40.779	Otolemur_garnettii
ENSEBUG00000010394	LARP4	91	37.271	ENSOARG00000017702	LARP4	77	39.094	Ovis_aries
ENSEBUG00000010394	LARP4	53	38.832	ENSPPAG00000039122	-	86	38.832	Pan_paniscus
ENSEBUG00000010394	LARP4	59	41.798	ENSPPAG00000035100	LARP4	63	42.579	Pan_paniscus
ENSEBUG00000010394	LARP4	81	60.733	ENSPPRG00000004522	LARP4	70	60.733	Panthera_pardus
ENSEBUG00000010394	LARP4	81	60.733	ENSPTIG00000015617	LARP4	70	60.733	Panthera_tigris_altaica
ENSEBUG00000010394	LARP4	51	40.000	ENSPTRG00000045907	-	92	40.489	Pan_troglodytes
ENSEBUG00000010394	LARP4	81	59.686	ENSPTRG00000004935	LARP4	86	42.049	Pan_troglodytes
ENSEBUG00000010394	LARP4	81	59.686	ENSPANG00000022964	LARP4	85	44.164	Papio_anubis
ENSEBUG00000010394	LARP4	85	39.757	ENSPKIG00000005950	larp4ab	71	37.457	Paramormyrops_kingsleyae
ENSEBUG00000010394	LARP4	90	38.983	ENSPSIG00000015867	LARP4	83	38.341	Pelodiscus_sinensis
ENSEBUG00000010394	LARP4	86	40.283	ENSPEMG00000018433	Larp4	81	40.459	Peromyscus_maniculatus_bairdii
ENSEBUG00000010394	LARP4	87	40.395	ENSPCIG00000000384	LARP4	73	40.000	Phascolarctos_cinereus
ENSEBUG00000010394	LARP4	85	39.709	ENSPFOG00000013148	larp4aa	85	40.580	Poecilia_formosa
ENSEBUG00000010394	LARP4	86	38.503	ENSPFOG00000009764	larp4ab	86	35.080	Poecilia_formosa
ENSEBUG00000010394	LARP4	85	37.852	ENSPLAG00000013626	larp4aa	70	38.636	Poecilia_latipinna
ENSEBUG00000010394	LARP4	87	38.624	ENSPLAG00000008502	larp4ab	87	34.827	Poecilia_latipinna
ENSEBUG00000010394	LARP4	85	38.581	ENSPMEG00000014271	larp4aa	70	38.821	Poecilia_mexicana
ENSEBUG00000010394	LARP4	87	38.475	ENSPMEG00000002720	larp4ab	87	35.362	Poecilia_mexicana
ENSEBUG00000010394	LARP4	51	41.388	ENSPREG00000016263	larp4ab	94	41.388	Poecilia_reticulata
ENSEBUG00000010394	LARP4	85	39.123	ENSPREG00000022597	larp4aa	70	39.688	Poecilia_reticulata
ENSEBUG00000010394	LARP4	74	39.714	ENSPPYG00000004512	-	98	40.787	Pongo_abelii
ENSEBUG00000010394	LARP4	88	37.279	ENSPCAG00000003671	LARP4	58	41.866	Procavia_capensis
ENSEBUG00000010394	LARP4	68	40.281	ENSPVAG00000016840	LARP4	56	41.259	Pteropus_vampyrus
ENSEBUG00000010394	LARP4	84	39.483	ENSPNAG00000014478	larp4ab	87	35.546	Pygocentrus_nattereri
ENSEBUG00000010394	LARP4	67	53.763	ENSPNAG00000024770	larp4aa	56	54.839	Pygocentrus_nattereri
ENSEBUG00000010394	LARP4	81	59.686	ENSRBIG00000038857	-	90	42.081	Rhinopithecus_bieti
ENSEBUG00000010394	LARP4	75	59.494	ENSRBIG00000036890	-	69	67.176	Rhinopithecus_bieti
ENSEBUG00000010394	LARP4	75	59.494	ENSRROG00000025487	-	69	67.176	Rhinopithecus_roxellana
ENSEBUG00000010394	LARP4	81	59.686	ENSRROG00000042764	-	90	41.855	Rhinopithecus_roxellana
ENSEBUG00000010394	LARP4	81	58.639	ENSSBOG00000026650	LARP4	70	58.639	Saimiri_boliviensis_boliviensis
ENSEBUG00000010394	LARP4	68	50.530	ENSSFOG00015014096	larp4ab	65	50.883	Scleropages_formosus
ENSEBUG00000010394	LARP4	93	37.684	ENSSFOG00015003868	larp4aa	66	51.724	Scleropages_formosus
ENSEBUG00000010394	LARP4	87	38.261	ENSSMAG00000002838	larp4ab	73	38.021	Scophthalmus_maximus
ENSEBUG00000010394	LARP4	87	38.394	ENSSDUG00000006655	larp4ab	71	39.037	Seriola_dumerili
ENSEBUG00000010394	LARP4	87	39.273	ENSSLDG00000001791	larp4ab	73	38.918	Seriola_lalandi_dorsalis
ENSEBUG00000010394	LARP4	68	42.857	ENSSARG00000012469	LARP4	68	41.065	Sorex_araneus
ENSEBUG00000010394	LARP4	68	41.781	ENSSPUG00000016552	LARP4	73	37.913	Sphenodon_punctatus
ENSEBUG00000010394	LARP4	87	39.024	ENSSPAG00000002172	larp4ab	73	38.368	Stegastes_partitus
ENSEBUG00000010394	LARP4	91	38.748	ENSSSCG00000028516	LARP4	90	36.568	Sus_scrofa
ENSEBUG00000010394	LARP4	73	38.267	ENSTGUG00000003479	LARP4	87	36.404	Taeniopygia_guttata
ENSEBUG00000010394	LARP4	85	35.915	ENSTRUG00000007206	larp4ab	71	36.964	Takifugu_rubripes
ENSEBUG00000010394	LARP4	89	35.714	ENSTNIG00000014571	larp4ab	75	35.434	Tetraodon_nigroviridis
ENSEBUG00000010394	LARP4	71	40.848	ENSTNIG00000015109	larp4aa	83	37.231	Tetraodon_nigroviridis
ENSEBUG00000010394	LARP4	87	35.284	ENSTBEG00000005167	LARP4	73	35.106	Tupaia_belangeri
ENSEBUG00000010394	LARP4	91	38.617	ENSTTRG00000003764	LARP4	91	34.836	Tursiops_truncatus
ENSEBUG00000010394	LARP4	69	43.548	ENSUAMG00000013764	LARP4	90	42.245	Ursus_americanus
ENSEBUG00000010394	LARP4	87	39.099	ENSUMAG00000008473	LARP4	73	40.288	Ursus_maritimus
ENSEBUG00000010394	LARP4	87	38.342	ENSVPAG00000010136	LARP4	87	36.236	Vicugna_pacos
ENSEBUG00000010394	LARP4	81	60.733	ENSVVUG00000024717	LARP4	72	41.007	Vulpes_vulpes
ENSEBUG00000010394	LARP4	87	37.097	ENSXETG00000007283	larp4	79	36.991	Xenopus_tropicalis
ENSEBUG00000010394	LARP4	52	40.554	ENSXCOG00000019635	larp4ab	95	40.554	Xiphophorus_couchianus
ENSEBUG00000010394	LARP4	88	38.966	ENSXCOG00000006387	larp4aa	75	38.191	Xiphophorus_couchianus
ENSEBUG00000010394	LARP4	85	39.859	ENSXMAG00000010519	larp4aa	70	40.035	Xiphophorus_maculatus
ENSEBUG00000010394	LARP4	87	38.448	ENSXMAG00000002156	larp4ab	87	35.143	Xiphophorus_maculatus